| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | 598636 = | 202 (1.060) | 20 (0.130) | 8/132 | NT | 11.5% | intergenic (+185/+97) | tuf/yxeP_2 | Elongation factor Tu/putative hydrolase YxeP |
| ? | USA300TCH1516_ALE | = 974254 | 143 (0.910) | intergenic (+97/‑450) | mrp/oatA_1 | Iron‑sulfur cluster carrier protein/O‑acetyltransferase OatA | |||||
Only 100 of 320 total aligned reads displayed.
AGAACAATAATTGATGAAAGACTGACTAATAAAACTTATAACTGATAATACTGTTTAAATAAAATTGTTGAGTCTTGGACATTGTAAAATG‑CTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGTTTATGTCTCAGATTCATATCTTTCAATTAAT > USA300TCH1516_ALE/598546‑598724 | ttgcattgcctgtagaatttcttttcgaaattctctgtgtttgggcccgcagtcaatataacattgtagagtataattcattgtgaataag < 2:3266424‑M1/1‑1 (MQ=255)ctgcattgcctgtacaatttcttttcgaaattctctgtgtttgggcccgcagtcaatataacattgtagagtataattcattgtgaataag > 1:3084150‑M1/91‑91 (MQ=255)aaaaatcatagaattagagcaagtatttaaaacaaattaagcatttaaattaattgaaagatatgaatctgagacataaactaatgAAATg < 1:1977760‑M1/5‑1 (MQ=255) tgcattgcctgtagaatttcttttcgaaattctctgtgtttgggcccgcagtcaatataacattgtagagtataattcattgtgaataaG‑c < 1:18867‑M1/2‑1 (MQ=255) tgcattgcctgtagaatttcttttcgaaattctctgtgtttgggcccgcagtcaatataacattgtagagtataattcattgtgaataaG‑c < 1:1400657‑M1/2‑1 (MQ=255) aaaatcatagaattagagcaagtatttaaaacaaattaagcatttaaattaattgaaagatatgaatctgagacataaactaatgAAATG‑c < 2:1413909‑M1/6‑1 (MQ=255) aaaatcatagaattagagcaagtatttaaaacaaattaagcatttaaattaattgaaagatatgaatctgagacataaactaatgAAATG‑c > 1:2930953‑M1/86‑91 (MQ=255) gcattgcctgtagaatttcttttcgaaattctctgtgtttgggcccgcagtcaatataacattgtagagtataattcattgtgaataaG‑Ct < 2:1290903‑M1/3‑1 (MQ=255) aaatcatagaattagagcaagtatttaaaacaaattaagcatttaaattaattgaaagatatgaatctgagacataaactaatgAAATG‑Ct > 1:3209956‑M1/85‑91 (MQ=255) aaatcatagaattagagcaagtatttaaaacaaattaagcatttaaattaattgaaagatatgaatctgagacataaactaatgAAATG‑Ct > 1:2099121‑M1/85‑91 (MQ=255) aaCAATAATTGATGAAAGACTGACTAATAAAACTTATAACTGATAATACTGTTTAAATAAAATTGTTGAGTCTTGGACATTGTAAAATG‑Ct < 1:1483435/91‑1 (MQ=255) aaCAATAATTGATGAAAGACTGACTAATAAAACTTATAACTGATAATACTGTTTAAATAAAATTGTTGAGTCTTGGACATTGTAAAATG‑Ct < 1:2430968/91‑1 (MQ=255) aatcatagaattagagcaagtatttaaaacaaattaagcatttaaattaattgaaagatatgaatctgagacataaactaatgAAATG‑CTc > 1:2231227‑M1/84‑91 (MQ=255) attgcctgtagaatttcttttcgaaattctctgtgtttgggcccgcagtcaatataacattgtagagtataattcattgtgaataaG‑CTcc > 2:3028554‑M1/87‑91 (MQ=255) attgcctgtagaatttcttttcgaaattctctgtgtttgggcccgcagtcaatataacattgtagagtataattcattgtgaataaG‑CTcc > 1:1710858‑M1/87‑91 (MQ=255) ttgcctgtagaatttcttttcgaaattctctgtgtttgggcccgcagtcaatataacattgtagagtataattcattgtgaataaG‑CTccc < 2:1534838‑M1/6‑1 (MQ=255) aataatTGATGAAAGACTGACTAATAAAACTTATAACTGATAATACTGTTTAAATAAAATTGTTGAGTCTTGGACATTGTAAAATG‑CTccc > 2:1012730/1‑91 (MQ=255) ataatTGATGAAAGACTGACTAATAAAACTTATAACTGATAATACTGTTTAAATAAAATTGTTGAGTCTTGGACATTGTAAAATG‑CTCCCt < 2:1952100/91‑1 (MQ=255) ataatTGATGAAAGACTGACTAATAAAACTTATAACTGATAATACTGTTTAAATAAAATTGTTGAGTCTTGGACATTGTAAAATG‑CTCCCt > 2:479277/1‑91 (MQ=255) ataatTGATGAAAGACTGACTAATAAAACTTATAACTGATAATACTGTTTAAATAAAATTGTTGAGTCTTGGACATTGTAAAATG‑CTCCCt < 2:1951106/91‑1 (MQ=255) gcctgtagaatttcttttcgaaattctctgtgtttgggcccgcagtcaatataatattgtagagtataattcattgtgaataaG‑CTCCCtt < 2:3057223‑M1/8‑1 (MQ=255) tagaattagagcaagtatttaaaacaaattaagcatttaaattaattgaaagatatgaatctgagacataaactaatgAAATG‑CTCCCTTc < 1:1611449‑M1/13‑1 (MQ=255) tagaattagagcaagtatttaaaacaaattaagcatttaaattaattgaaagatatgaatctgagacataaactaatgAAATG‑CTCCCTTc > 2:753984‑M1/79‑91 (MQ=255) cctgtagaatttcttttcgaaattctctgtgtttgggcccgcagtcaatataacattgtagagtataattcattgtgaataaG‑CTCCCTTc < 2:637287‑M1/9‑1 (MQ=255) agaattagagcaagtatttaaaacgaattaagcatttaaattagttgaaagatatgaatctgagacataaactaatgAAATG‑CTCCCTTCa > 2:3602993‑M1/78‑91 (MQ=255) gaattagagcaagtatttaaaacaaattaagcatttaaattaattgaaagatatgaatctgagacataaactaatgAAATG‑CTCCCTTCaa < 1:1768733‑M1/15‑1 (MQ=255) gtagaatttcttttcgaaattctctgtgtttgggcccgcagtcaatataacattgtagagtataattcattgtgaataaG‑CTCCCTTCaaa < 2:2092165‑M1/12‑1 (MQ=255) tagaatttcttttcgaaattctctgtgtttgggcccgcagtcaatataacattgtagagtataattcattgtgaataaG‑CTCCCTTCAAAg > 2:2613561‑M1/79‑91 (MQ=255) tagaatttcttttcgaaattctctgtgtttgggcccgcagtcaatataacattgtagagtataattcattgtgaataaG‑CTCCCTTCAAAg < 2:93561‑M1/13‑1 (MQ=255) tgaAAGACTGACTAATAAAACTTATAACTGATAATACTGTTTAAATAAAATTGTTGAGTCTTGGACATTGTAAAATG‑CTCCCTTCAAAGtt < 2:49450/91‑1 (MQ=255) gaAAGACTGACTAATAAAACTTATAACTGATAATACTGTTTAAATAAAATTGTTGAGTCTTGGACATTGTAAAATG‑CTCCCTTCAAAGttt > 1:3384239/1‑91 (MQ=255) gaAAGACTGACTAATAAAACTTATAACTGATAATACTGTTTAAATAAAATTGTTGAGTCTTGGACATTGTAAAATG‑CTCCCTTCAAAGttt < 2:3211709/91‑1 (MQ=255) aaaGACTGACTAATAAAACTTATAACTGATAATACTGTTTAAATAAAATTGTTGAGTCTTGGACATTGTAAAATG‑CTCCCTTCAAAGtttt < 1:2874279/91‑1 (MQ=255) aaGACTGACTAATAAAACTTATAACTGATAATACTGTTTAAATAAAACTGTTGAGTCTTGGACATTGTAAAATG‑CTCACTTCAAAGTTTTc > 1:3877852/1‑91 (MQ=255) aGACTGACTAATAAAACTTATAACTGATAATACTGTTTAAATAAAATTGTTGAGTCTTGGACATTGTAAAATG‑CTCCCTTCAAAGTTTTCa > 2:3324585/1‑91 (MQ=255) aGACTGACTAATAAAACTTATAACTGATAATACTGTTTAAATAAAATTGTTGAGTCTTGGACATTGTAAAATG‑CTCCCTTCAAAGTTTTCa > 1:2127844/1‑91 (MQ=255) aGACTGACTAATAAAACTTATAACTGATAATACTGTTTAAAGAAAATTGTTGAGTCTTGGACATTGTAAAATG‑CTCCCTTCAAAGTTTTCa > 1:3367326/1‑91 (MQ=255) tgactAATAAAACTTATAACTGATAATACTGTTTAAATAAAATTGTTGAGTCTTGGACATTGTAAAATG‑CTCCCTTCAAAGTTTTCAtttt > 2:2644311/1‑91 (MQ=255) ctAATAAAACTTATAACTGATAATACTGTTTAAATAAAATTGTTGAGTCTTGGACATTGTAAAATG‑CTCCCTTCAAAGTTTTCATTTTTTc > 2:2711346/1‑91 (MQ=255) taataaAACTTATAACTGATAATACTGTTTAAATAAAATTGTTGAGTCTTGGACATTGTAAAATG‑CTCCCTTCAAAGTTTTCATTTTTTCa > 1:123629/1‑91 (MQ=255) aaaaCTTATAACTGATAATACTGTTTAAATAAAATTGTTGAGTCTTGGACATTGTAAAATG‑CTCCCTTCAAAGTTTTCATTTTTTCAATGt < 1:2492654/91‑1 (MQ=255) aaaCTTATAACTGATAATACTGTTTAAATAAAATTGTTGAGTCTTGGACATTGTAAAATG‑CTCCCTTCAAAGTTTTCATTTTTTCAATGTc > 1:90137/1‑91 (MQ=255) aaCTTATAACTGATAATACTGTTTAAATAAAATTGTTGTGTCTTGGACATTGTAAAATG‑CTCCCTTCAAAGTTTTCATTTTTTCAATGTCt > 2:3566069/1‑91 (MQ=255) aCTTATAACTGATAATACTGTTTAAATAAAATTGTTGAGTCTTGGACATTGTAAAATG‑CTCCCTTCAAAGTTTTCATTTTTTCAATGTCTa > 1:2173732/1‑91 (MQ=255) aattaagcatttaaattaattgaaagatatgaatctgagacataaactaatgAAATG‑CTCCCTTCAAAGTTTTCATTTTTTCAATGTCTAc > 1:31485‑M1/53‑91 (MQ=255) aattaagcatttaaattaattgaaagatatgaatctgagacataaactaatgAAATG‑CTCCCTTCAAAGTTTTCATTTTTTCAATGTCTAc > 2:889780‑M1/53‑91 (MQ=255) ttATAACTGATAATACTGTTTAAATAAAATTGTTGAGTCTTGGACATTGTAAAATG‑CTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACt < 1:2705917/91‑1 (MQ=255) tgtgtttgggcccgcagtcaatataacattgtagagtataattcattgtgaataaG‑CTCCCTTCAAAATTTTCATTTTT‑CAATGTCTACtt > 1:2330613‑M1/56‑91 (MQ=255) attaagcatttaaattaattgaaagatatgaatctgagacataaactaatgAAATG‑CTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACt > 2:3683618‑M1/52‑91 (MQ=255) gtgtttgggcccgcagtcaatataacattgtagagtataattcattgtgaataaGGCTCCCTTCAAAATTTTCATTTTT‑CAATGTCTACtt < 2:2393372‑M1/37‑1 (MQ=255) gtgtttgggcccgcagtcaatataacattgtagagtataattcattgtgaataaG‑CTCCCTTCAAAATTTTCATTTTT‑CAATGTCTACttt > 2:567608‑M1/55‑91 (MQ=255) tgtttgggcccgcagtcaatataacattgtagagtataattcattgtgaataaG‑CTCCCTTCAAAATTTTCATTTTT‑CAATGTCTACTTTg > 1:1303049‑M1/54‑91 (MQ=255) ataACTGATAATACTGTTTAAATAAAATTGTTGAGTCTTGGACATTGTAAAATG‑CTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACttt < 2:2311077/91‑1 (MQ=255) ataACTGATAATACTGTTTAAATAAAATTGTTGAGTCTTGGACATTGTAAAATG‑CTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACttt > 2:3158887/1‑91 (MQ=255) ataACTGATAATACTGTTTAAATAAAATTGTTGAGTCTTGGACATTGTAAAATG‑CTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACttt > 1:1078449/1‑91 (MQ=255) ataACTGATAATACTGTTTAAATAAAATTATTGAGTCTTGGACATTGTAAAATG‑CTCCCTTCAAAGTTTTCATTTTTTCAATCTCTACttt > 2:3374218/1‑91 (MQ=255) taACTGATAATACTGTTTAAATAAAATTGTTGAGTCTTGGACATTGTAAAATG‑CTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTg > 1:65334/1‑91 (MQ=255) aaCTGATAATACTGTTTAAATAAAATTGTTGAGTCTTGGACATTGTAAAATG‑CTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGa > 1:3646350/1‑91 (MQ=255) gcatttaaattaattgaaagatatgaatctgagacataaactaatgAAATG‑CTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGaa > 2:1201120‑M1/47‑91 (MQ=255) aCTGATAATACTGTTTAAATAAAATTGTTGAGTCTTGGACATTGTAAAATG‑CTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGaa < 1:2919533/91‑1 (MQ=255) catttaaattaattgaaagatatgaatctgagacataaactaatgAAATG‑CTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAg > 1:255863‑M1/46‑91 (MQ=255) tGATAATACTGTTTAAATAAAATTGTTGAGTCTTGGACATTGTAAAATG‑CTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAgg < 2:3848373/91‑1 (MQ=255) gcccgcagtcaatataacattgtagagtataattcattgtgaataaGGCTCCCTTCAAAATTTTCATTTTT‑CAATGTCTACTTTGAAGGGa > 2:223013‑M1/47‑91 (MQ=255) ataataCTGTTTAAATAAAATTGTTGAGTCTTGGACATTGTAAAATG‑CTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGa > 2:3210974/1‑91 (MQ=255) ccgcagtcaatataacattgtagagtataattcattgtgaataaGGCTCCCTTCAAAATTTTCATTTTT‑CAATGTCTACTTTGAAGGGAGc > 1:94192‑M1/45‑91 (MQ=255) ataCTGTTTAAATAAAATTGTTGAGTCTTGGACATTGTAAAATG‑CTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCa < 1:1515219/91‑1 (MQ=255) taCTGTTTAAATAAAATTGTTGAGTCTTGGACATTGTAAAATG‑CTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCAt > 2:1718124/1‑91 (MQ=255) taCTGTTTAAATAAAATTGTTGAGTCTTGGACAGTGTAAAATG‑CTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCAt < 1:3440615/91‑1 (MQ=255) aCTGTTTAAATAAAATTGTTGAGTCTTGGACATTGTAAAATG‑CTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCAtt < 1:2285948/91‑1 (MQ=255) aCTGTTTAAATAAAATTGTTGAGTCTTGGACATTGTAAAATG‑CTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCAtt < 2:312894/91‑1 (MQ=255) cTGTTTAAATAAAATTGTTGAGTCTTGGACATTGTAAAATG‑CTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCAttt > 2:1812949/1‑91 (MQ=255) cTGTTTAAATAAAATTGTTGAGTCTTGGACATTGTAAAATG‑CTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCAttt > 1:1830548/1‑91 (MQ=255) gTTTAAATAAAATTGTTGAGTCTTGGACATTGTAAAATG‑CTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCa < 1:3757373/91‑1 (MQ=255) tttAAATAAAATTGTTGAGTCTTGGACATTGTAAAATG‑CTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCAt > 1:1913388/1‑91 (MQ=255) aataaaATTGTTGAGTCTTGGACATTGTAAAATG‑CTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGt < 2:3536274/91‑1 (MQ=255) aataaaATTGTTGAGTCTTGGACATTGTAAAATG‑CTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGt > 1:2624717/1‑91 (MQ=255) ataaaATTGTTGAGTCTTGGACATTGTAAAATG‑CTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGtt > 1:2784210/1‑91 (MQ=255) aaaTTGTTGAGTCTTGGACATTGTAAAATG‑CTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGTTTAt < 1:1052710/91‑1 (MQ=255) aaTTGTTGAGTCTTGGACATTGTAAAATG‑CTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGTTTATg > 1:1116762/1‑91 (MQ=255) aaTTGTTGAGTCTTGGACATTGTAAAATG‑CTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGTTTATg < 2:831981/91‑1 (MQ=255) tgttgAGTCTTGGACATTGTAAAATG‑CTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGTTTATGtct > 2:3084339/1‑91 (MQ=255) gttgAGTCTTGGACATTGTAAAATG‑CTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGTTTATGtctc > 1:206621/1‑91 (MQ=255) ttgAGTCTTGGACATTGTAAAATG‑CTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGTTTATGTCTCa < 1:2630878/91‑1 (MQ=255) ttgAGTCTTGGACATTGTAAAATG‑CTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGTTTATGTCTCa > 2:3234587/1‑91 (MQ=255) ttgAGTCTTGGACATTGTAAAATG‑CTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGTTTATGTCTCa > 2:2353804/1‑91 (MQ=255) gAGTCTTGGACATTGTAAAATG‑CTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGTTTATGTCTCAGa > 1:119008/1‑91 (MQ=255) cTTGGACATTGTAAAATG‑CTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGTTTATGTCTCAGATTCa < 1:760661/91‑1 (MQ=255) ttGGACATTGTAAAATG‑CTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGTTTATGTCTCAGATTCat > 2:2796246/1‑91 (MQ=255) ggACATTGTAAAATG‑CTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGTTTATGTCTCAGATTCatat > 1:1684885/1‑91 (MQ=255) gACATTGTAAAATG‑CTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGTTTATGTCTCAGATTCATATc < 1:562923/91‑1 (MQ=255) aCATTGTAAAATG‑CTCCCTTCAAAGTTTTCATTTGTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGTTTATGTCTCAGATTCATATCt < 1:358435/91‑1 (MQ=255) cATTGTAAAATG‑CTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGTTTATGTCTCAGATTCATATCtt > 2:1611449/1‑91 (MQ=255) aTTGTAAAATG‑CTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGTTTATGTCTCAGATTCATATCttt > 2:2526317/1‑91 (MQ=255) gTAAAATG‑CTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGTTTATGTCTCAGATTCATATCTTTCaa < 2:1475885/91‑1 (MQ=255) gTAAAATG‑CTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGTTTATGTCTCAGATTCATATCTTTCaa > 1:1315628/1‑91 (MQ=255) gTAAAATG‑CTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGTTTATGTCTCAGATTCATATCTTTCaa > 1:1846422/1‑91 (MQ=255) tAAAATG‑CTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGTTTATGTCTCAGATTCATATCTTTCaat < 1:1812949/91‑1 (MQ=255) aaaaTG‑CTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGTTTATGTCTCAGATTCATATCTTTCaatt > 1:821444/1‑91 (MQ=255) AATG‑CTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGTTTATGTCTCAGATTCATATCTTTCaattaa > 2:689967‑M1/1‑91 (MQ=255) AATG‑CTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGTTTATGTCTCAGATTCATATCTTTCaattaa > 1:43873‑M1/1‑91 (MQ=255) | AGAACAATAATTGATGAAAGACTGACTAATAAAACTTATAACTGATAATACTGTTTAAATAAAATTGTTGAGTCTTGGACATTGTAAAATG‑CTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGTTTATGTCTCAGATTCATATCTTTCAATTAAT > USA300TCH1516_ALE/598546‑598724 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |