| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | 671388 = | 211 (1.110) | 11 (0.070) | 8/140 | NT | 6.1% | intergenic (+13/‑375) | argS/nth_1 | Arginine‑‑tRNA ligase/Endonuclease III |
| ? | USA300TCH1516_ALE | 671434 = | 152 (0.910) | intergenic (+59/‑329) | argS/nth_1 | Arginine‑‑tRNA ligase/Endonuclease III | |||||
Only 100 of 273 total aligned reads displayed.
GCTATGATTGAAGCGGTCAGAATTACATTGAAAAATGCATTGGCAATGGTCGGTGTAAGCGCACCTGAATCAATGTAAGAACATTTATATACACTCCAACGTAGAGTTTCTCGAAAGATACTTTGTGTTGGAGTGTTTTTTTAGGTATGTGACATATTGGGGAATGCTTAGTATGTGAAT > USA300TCH1516_ALE/671298‑671477 | tcttatgcagttgtgcagagcatccaactgtgttcctcttaaccttattcacatactaagcattccccaatatgtcacatacctaaaaaaa > 2:624663‑M1/91‑91 (MQ=255)tcttatgcagttgtgcagagcatccaactgtgttcctcttaaccttattcacatactaagcattccccaatatgtcacatacctaaaaaaa > 1:1870907‑M1/91‑91 (MQ=255)gCTATGATTGAAGCGGTCAGAATTACATTGAAAAATGCATTGGCAATGGTCGGTGTAAGCGCACCTGAATCAATGTAAGAACATTtatata < 2:2549153/91‑1 (MQ=255) cTATGATTGAAGCGGTCAGAATTACATTGAAAAATGCATTGGCAATGGTCGGTGTAAGCGCACCTGAATCAATGTAAGAACATTTATATac > 2:1485584/1‑91 (MQ=255) aatatgcagttgtgcagagcatccaactgtgttcctcttaaccttattcacatactaagcattccccaatatgtcacatacctaaaaaaac > 2:2231029‑M1/90‑91 (MQ=255) tatgcagttgtgcagagcatccaactgtgttcctcttaaccttattcacatactaagcattccccaatatgtcacatacctaaaaaaacac < 1:112467‑M1/4‑1 (MQ=255) aTGATTGAAGCGGTCAGAATTACATTGAAAAATGCATTGGCAATGGTCGGTGTAAGCGCACCTGAATCAATGTAAGAACATTTATATacac < 1:84477/91‑1 (MQ=255) atgcagttgtgcagagcatccaactgtgttcctcttaaccttattcacatactaagcattccccaatatgtcacatacctaaaaaaACACt < 1:2946183‑M1/5‑1 (MQ=255) gcagttgtgcagagcatccaactgtgttcctcttaaccttattcacatactaagcattccccaatatgtcacatacctaaaaaaACACTcc < 1:1830634‑M1/7‑1 (MQ=255) aTTGAAGCGGTCAGAATTACATTGAAAAATGCATTGGCAATGGTCGGTGTAAGCGCACCTGAATCAATGTAAGAACATTTATATACACTcc > 2:3450831/1‑91 (MQ=255) aTTGAAGCGGTCAGAATTACATTGAAAAATGCATTGGCAATGGTCGGTGTAAGCGCACCTGAATCAATGTAAGAACATTTATATACACTcc < 1:52391/91‑1 (MQ=255) aTTGAAGCGGTCAGAATTACATTGAAAAATGCATTGGCAATGGTCGGTGTAAGCGCACCTGAATCAATGTAAGAACATTTATATACACTcc < 1:2459719/91‑1 (MQ=255) cagttgtgcagagcatccaactgtgttcctcttaaccttattcacatactaagcattccccaatatgtcacatacctaaaaaaACACTCCa < 2:621912‑M1/8‑1 (MQ=255) gttgtgcagagcatccaactgtgttcctcttaaccttattcacatactaagcattcccccatatgtcacatacctaaaaaaACACTCCAAc < 2:2611615‑M1/10‑1 (MQ=255) gttgtgcagagcatccaactgtgttcctcttaaccttattcacatactaagcattccccaatatgtcacatacctaaaaaaACACTCCAAc < 2:1512867‑M1/10‑1 (MQ=255) aaGCGGTCAGAATTACATTGAAAAATGCATTGGCAATGGTCGGTGTAAGCGCACCTGAATCAATGTAAGAACATTTATATACACTCCAACg > 2:1616337/1‑91 (MQ=255) aaGCGGTCAGAATTACATTGAAAAATGCATTGGCAATGGTCGGTGTAAGCGCACCTGAATCAATGTAAGAACATTTATATACACTCCAACg > 2:1194494/1‑91 (MQ=255) aGCGGTCAGAATTACATTGAAAAATGCATTGGCAATGGTCGGTGTAAGCGCACCTGAATCAATGTAAGAACATTTATATACACTCCAACGt < 2:117269/91‑1 (MQ=255) gCGGTCAGAATTACATTGAAAAATGCATTGGCAATGGTCGGTGTAAGCGCACCTGAATCAATGTAAGAACATTTATATACACTCCAACGTa < 2:2254726/91‑1 (MQ=255) ggTCAGAATTACATTGAAAAATGCATTGGCAATGGTCGGTGTAAGCGCACCTGAATCAATGTAAGAACATTTATATACACTCCAACGTaga > 2:970559/1‑91 (MQ=255) gTCAGAATTACATTGAAAAATGCATTGGCAATGGTCGGTGTAAGCGCACCTGAATCAATGTAAGAACATTTATATACACTCCAACTTagag < 2:1372757/91‑1 (MQ=255) tCAGAATTACATTGAAAAATGCATTGGCAATGGTCGGTGTAAGCGCACCTGAATCAATGTAAGAACATTTATATACACTCCAACGTAGAGt > 1:1236993/1‑91 (MQ=255) tCAGAATTACATTGAAAAATGCATTGGCAATGGTCGGTGTAAGCGCACCTGAATCAATGTAAGAACATTTATATACACTCCAACGTAGAGt < 1:2005972/91‑1 (MQ=255) tCAGAATTACATTGAAAAATGCATTGGCAATGGTCGGTGTAAGCGCACCTGAATCAATGTAAGAACATTTATATACACTCCAACGTAGAGt < 2:2040979/91‑1 (MQ=255) tCAGAATTACATTGAAAAATGCATTGGCAATGGTCGGTGTAAGCGCACCTGAATCAATGTAAGAACATTTATATACACTCCAACGTAGAGt > 1:1717657/1‑91 (MQ=255) tCAGAATTACATTGAAAAATGCATTGGCAATGGTCGGTGTAAGCGCACCTGAATCAATGTAAGAACATTTATATACACTCCAACGTAGAGt < 2:467148/91‑1 (MQ=255) gAATTACATTGAAAAATGCATTGGCAATGGTCGGTGTAAGCGCACCTGAATCAATGTAAGAACATCTATATACACTCCAACGTAGAGTTtc > 2:2710545/1‑91 (MQ=255) aTTACATTGAAAAATGCATTGACAATGGTCGGTGTAAGCGCACCTGAATCAATGTAAGAACATTTATATACACTCCAACGTAGAGTTtctc < 2:2100233/91‑1 (MQ=255) ttACATTGAAAAATGCATTGGCAATGGTCGGTGTAAGCGCACCTGAATCAATGTAAGAACATTTATATACACTCCAACGTAGAGTTTCTCg < 1:1472174/91‑1 (MQ=255) tACATTGAAAAATGCATTGGCAATGGTCGGTGTGAGCGCACCTGAATCAATGTAAGAACGTTTATATACACTCCAACGTAGAGTTTCTCGa < 1:3441375/91‑1 (MQ=255) aCATTGAAAAATGCATTGGCAATGGTCGGTGTAAGCGCACCTGAATCAATGTAAGAACATTTATATACACTCCAACGTAGAGTTTCTCGaa > 1:88298/1‑91 (MQ=255) actgtgttcctcttaaccttattcacatactaagcattccccaatatgtcacatacctaaaaaaACACTCCAACGTAGAGTTTCTCGAAAg < 2:194383‑M1/27‑1 (MQ=255) aTTGAAAAATGCATTGGCAATGGTCGGTGTAAGCGCACCTGAATCAATGTAAGAACATTTATATACACTCCAACGTAGAGTTTCTCGAAAg < 2:2763513/91‑1 (MQ=255) ttGAAAAATGCATTGGCAATGGTCGGTGTAAGCGCACCTGAATCAATGTAAGAACATTTATATACACTCCAACGTAGAGTTTCTCGAAAGa < 2:163255/91‑1 (MQ=255) tGAAAAATGCATTGGCAATGGTCGGTGTAAGCGCACCTGAATCAATGTAAGAACATTTATATACACTCCAACGTAGAGTTTCTCGAAAGAt < 2:57726/91‑1 (MQ=255) gAAAAATGCATTGGCAATGGTCGGTGTAAGCGCACCTGAATCAATGTAAGAACATTTATATACACTCCAACGTAGAGTTTCTCGAAAGATa > 2:2265463/1‑91 (MQ=255) aaaaaTGCATTGGCAATGGTCGGTGTAAGCGCACCTGAATCAATGTAAGAACATTTATATACACTCCAACGTAGAGTTTCTCGAAAGATAc < 1:1439840/91‑1 (MQ=255) aaaTGCATTGGCAATGGTCGGTGTAAGCGCACCTGAATCAATGTAAGAACATTTATATACACTCTAACGTAGAGTTTCTCGAAAGATACtt < 2:2208501/91‑1 (MQ=255) aaaTGCATTGGCAATGGTCGGTGTAAGCGCACCTGAATCAATGTAAGAACATTTATATACACTCCAACGTAGAGTTTCTCGAAAGATACtt < 1:1114974/91‑1 (MQ=255) aaaTGCATTGGCAATGGTCGGTGTAAGCGCACATGAATCAATGTAAGAACATTTATATACACTCCAACGTAGAGTTTCTCGAAAGATACtt < 1:3311802/91‑1 (MQ=255) aTGCATTGGCAATGGTCGGTGTAAGCGCACCTGAATCAATGTAAGAACATTTATATACACTCCAACGTAGAGTTTCTCGAAAGATACTTtg < 2:1869744/91‑1 (MQ=255) aTGCATTAGCAATGGTCTGTGTAAGCGCACCTGAATCAATGTAAGAACATTTATAGACGCTCCAACGTAGAGTTTCTCGAAAGATACTTtg < 2:1723239/91‑1 (MQ=255) gCATTGGCAATGGTCGGTGTAAGCGCACCTGAATCAATGTAAGAACATTTATATACACTCCAACGTAGAGTTTCTCGAAAGATACTTtgtg < 2:710547/91‑1 (MQ=255) gCATTGGCAATGGTCGGTGTAAGCGCACCTGAATCAATGTAAGAACATTTATATACACTCCAACGTAGAGTTTCTCGAAAGATACTTtgtg < 2:2437232/91‑1 (MQ=255) cATTGGCAATGGTCGGTGTAAGCGCACCTGAATCAATGTAAGAACATTTATATACACTCCAACGTAGAGTTTCTCGAAAGATACTTTgtgt < 2:2012761/91‑1 (MQ=255) aTTGGCAATGGTCGGTGTAAGCGCACCTGAATCAATGTAAGAACATTTATATACACTCCAACGTAGAGTTTCTCGAAAGATACTTTGTGtt < 2:1256207/91‑1 (MQ=255) ttGGCAATGGTCGGTGTAAGCGCACCTGAATCAATGTAAGAACATTTATATACACTCCAACGTAGAGTTTCTCGAAAGATACTTTGTGTTg > 2:2921757/1‑91 (MQ=255) tGGCAATGGTCGGTGTAAGCGCACCTGAATCAATGTAAGAACATTTATATACACTCCAACGTAGAGTTTCTCGAAAGATACTTTGTGTTgg > 1:2426315/1‑91 (MQ=255) ttattcacatactaagcattccccagtatgtcacatacctaaaaaaACACTCCAACGTAGAGTTTCTCGAAAGATACTTTGTGTTGGAgtg > 1:3601347‑M1/47‑91 (MQ=255) aaTGGTCGGTGTAAGCGCACCTGAATCAATGTAAGAACATTTATATACACTCCAACGTAGAGTTTCTCGAAAGATACTTTGTGTTGGAgtg < 1:2685102/91‑1 (MQ=255) aaTGGTCGGTGTAAGCGCACCTGAACCAATGTAAGAACATTTATATACACTCCAACGTAGAGTTTCTCGAAAGATACTTTGTGTTGGAgtg < 1:3626079/91‑1 (MQ=255) tGGTCGGTGTAAGCGCACCTGAATCAATGTAAGAACATTTATATACACTCCAACGTAGAGTTTCTCGAAAGATACTTTGTGTTGGAGTGtt > 2:1693049/1‑91 (MQ=255) ttcacatactaagcattccccaatatgtcacatacctaaaaaaACACTCCAACGTAGAGTTTCTCGAAAGATACTTTGTGTTGGAGTGttt > 1:194383‑M1/44‑91 (MQ=255) ggTCGGTGTAAGCGCACCTGAATCAATGTAAGAACATTTATATACACTCCAACGTAGAGTTTCTCGAAAGATACTTTGTGTTGGAGTGttt < 1:612935/91‑1 (MQ=255) ggTCGGTGTAAGCGCACCTGAATCAATGTAAGAACATTTATATACACTCCAACGTAGAGTTTCTCGAAAGATACTTTGTGTTGGAGTGttt > 2:3683060/1‑91 (MQ=255) ggTCGGTGTAAGCGCACCTGAATCAATGTAAGAACATTTATATACACTCCAACGTAGAGTTTCTCGAAAGATACTTTGTGTTGGAGTGttt > 1:3837895/1‑91 (MQ=255) ggTGTAAGCGCACCTGAATCAATGTAAGAACATTTATATACACTCCAACGTAGAGTTTCTCGAAAGATACTTTGTGTTGGAGTGttttttt > 2:829556/1‑91 (MQ=255) gtgtAAGCGCACCTGAATCAATGTAAGAACATTTATATACACTCCAACGTAGAGTTTCTCGAAAGATACTTTGTGTTGGAGTGTTTTTTTa < 2:1045439/91‑1 (MQ=255) tgtAAGCGCACCTGAATCAATGTAAGAACATTTATATCCACTCCAACGTAGAGTTTCTCGAAAGATACTTTGTGTTGGAGTGTTTTTTTAg > 1:740833/1‑91 (MQ=255) tgtAAGCGCACCTGAATCAATGTAAGAACATTTATATACACTCCAACGTAGAGTTTCTCGAAAGATACTTTGTGTTGGAGTGTTTTTTTAg < 1:2602160/91‑1 (MQ=255) tgtAAGCGCACCTGAATCAATGTAAGAACATTTATATACACTCCAACGTAGAGTTTCTCGAAAGATACTTTGTGTTGGAGTGTTTTTTTAg > 1:3679732/1‑91 (MQ=255) gtAAGCGCACCTGAATCAATGTAAGAACATTTATATACACTCCAACGTAGAGTTTCTCGAAAGATACTTTGTGTTGGAGTGTTTTTTTAgg < 1:3072148/91‑1 (MQ=255) tAAGCGCACCTGAATCAATGTAAGAACATTTATATACACTCCAACGTAGAGTTTCTCGAAAGATACTTTGTGTTGGAGTGTTTTTTTAGGt > 1:2358841/1‑91 (MQ=255) aaGCGCACCTGAATCAATGTAAGAACATTTATATACACTCCAACGTAGAGTTTCTCGAAAGATACTTTGTGTTGGAGTGTTTTTTTAGGTa > 2:2879754/1‑91 (MQ=255) gcgcACCTGAATCAATGTAAGAACATTTATATACACTCCAACGTAGAGTTTCTCGAAAGATACTTTGTGTTGGAGTGTTTTTTTAGGTAtg > 2:3795233/1‑91 (MQ=255) cgcACCTGAATCAATGTAAGAACATTTATATACACTCCAACGTAGAGTTTCTCGAAAGATACTTTGTGTTGGAGTGTTTTTTTAGGTAtgt < 2:88298/91‑1 (MQ=255) ccTGAATCAATGTAAGAACATTTATATACACTCCAACGTAGAGTTTCTCGAAAGATACTTTGTGTTGGAGTGTTTTTTTAGGTATGTGACa > 2:3056833/1‑91 (MQ=255) ccTGAATCAATGTAAGAACATTTATATACACTCCAACGTAGAGTTTCTCGAAAGATACTTTGTGTTGGAGTGTTTTTTTAGGTATGTGACa < 2:2948226/91‑1 (MQ=255) cTGAATCAATGTAAGAACATTTATATACACTCCAACGTAGAGTTTCTCGAAAGATACTTTGTGTTGGAGTGTTTTTTTAGGTATGTGACat > 2:2687097/1‑91 (MQ=255) taaTCAATGTAAGAACATTTATATTCACTCCAACGTAGAGTTTCTCGAAAGATACTTTGTGTTGGAGTGTTTTTTTAGGTATGTGACatat < 2:3848794/90‑1 (MQ=255) gAATCAATGTAAGAACATTTATATACACTCCAACGTAGAGTTTCTCGAAAGATACTTTGTGTTGGAGTGTTTTTTTAGGTATGTGACatat > 1:625103/1‑91 (MQ=255) gAATCAATGTAAGAACATTTATATACACTCCAACGTAGAGTTTCTCGAAAGATACTTTGTGTTGGAGTGTTTTTTTAGGTATGTGACatat < 1:284616/91‑1 (MQ=255) aTCAATGTAAGAACATTTATATACACTCCAACGTAGAGTTTCTCGAAAGATACTTTGTGTTGGAGTGTTTTTTTAGGTATGTGACATATTg > 2:3325559/1‑91 (MQ=255) tCAATGTAAGAACATTTATATACACTCCAACGTAGAGTTTCTCGAAAGATACTTTGTGTTGGAGTGTTTTTTTAGGTATGTGACATATTgg < 2:406765/91‑1 (MQ=255) cAATGTAAGAACATTTATATACACTCCAACGTAGAGTTTCTCGAAAGATACTTTGTGTTGGAGTGTTTTTTTAGGTATGTGACATATTggg < 1:2879754/91‑1 (MQ=255) aTGTAAGAACATTTATATACACTCCAACGTAGAGTTTCTCGAAAGATACTTTGTGTTGGAGTGTTTTTTTAGGTATGTGACATATTGGGGa < 1:2767394/91‑1 (MQ=255) aTGTAAGAACATTTATATACACTCCAACGTAGAGTTTCTCGAAAGATACTTTGTGTTGGAGTGTTTTTTTAGGTATGTGACATATTGGGGa < 1:3370928/91‑1 (MQ=255) tGTAAGAACATTTATATACACTCCAACGTAGAGTTTCTCGAAAGATACTTTGTGTTGGAGTGTTTTTTTAGGTATGTGACATATTGGGGaa > 1:1883279/1‑91 (MQ=255) tAAGAACATTTATATACACTCCAACGTAGAGTTTCTCGAAAGATACTTTGTGTTGGAGTGTTTTTTTAGGTATGTGACATATTGGGGAATg > 1:621912/1‑91 (MQ=255) tAAGAACATTTATATACACTCCAACGTAGAGTTTCTCGAAAGATACTTTGTGTTGGAGTGTTTTTTTAGGTATGTGACATATTGGGGAATg > 2:562822/1‑91 (MQ=255) aaGAACATTTATATACACTCCAACGTAGAGTTTCTCGAAAGATACTTTGTGTTGGAGTGTTTTTTTAGTTATGTGACATATTGGGGAATGc > 2:3634746/1‑91 (MQ=255) aaGAACATTTATATACACTCCAACATAGAGTTTCTCGAAAGATACTTTGTGTTGGAGTGTTTTTTTAGGTATGTGACATATTGGGGAATGc > 2:3145295/1‑91 (MQ=255) aGAACATTTATATACACTCCAACGTAGAGTTTCTCGAAAGATACTTTGTGTTGGAGTGTTTTTTTAGGTATGTGACATATTGGGGAATGCt > 1:2156822/1‑91 (MQ=255) aaCATTTATATACACTCCAACGTAGAGTTTCTCGAAAGATACTTTGTGTTGGAGTGTTTTTTTAGGTATGTGACATATTGGGGAATGCTTa < 1:1600423/91‑1 (MQ=255) cATTTATATACACTCCAACGTAGAGTTTCTCGAAAGATACTTTGTGTTGGAGTGTTTTTTTAGGTATGTGACATATTGGGGAATGCTTAGt < 2:1430349/91‑1 (MQ=255) cATTTATATACACTCCAACGTAGAGTTTCTCGAAAGATACTTTGTGTTGGAGTGTTTTTTTAGGTATGTGACATATTGGGGAATGCTTAGt < 2:2832508/91‑1 (MQ=255) aTTTATATACACTCCAACGTAGAGTTTCTCGAAAGATACTTTGTGTTGGAGTGTTTTTTTAGGTATGTGACATATTGGGGAATGCTTAGTa > 2:1089572/1‑91 (MQ=255) aTTTATATACACTCCAACGTAGAGTTTCTCGAAAGATACTTTGTGTTGGAGTGTTTTTTTAGGTATGTGACATATTGGGGAATGCTTAGTa < 2:2358841/91‑1 (MQ=255) aTTTATATACACTCCAACGTAGAGTTTCTCGAAAGATACTTTGTGTTGGAGTGTTTTTTTAGGTATGTGACATATTGGGGAATGCTTAGTa > 1:2124548/1‑91 (MQ=255) aTTTATATACACTCCAACGTAGAGTTTCTCGAAAGATACTTTGTGTTGGAGTGTTTTTTTAGGTATGTGACATATTGGGGAATGCTTAGTa > 1:3523699/1‑91 (MQ=255) tatataCACTCCAACGTAGAGTTTCTCGAAAGATACTTTGTGTTGGAGTGTTTTTTTAGGTATGTGACATATTGGGGAATGCTTAGTAtgt > 1:1316852/1‑91 (MQ=255) tatataCACTCCAACGTAGAGTTTCTCGAAAGATACTTTGTGTTGGAGTGTTTTTTTAGGTATGTGACATATTGGGGAATGCTTAGTAtgt > 2:842761/1‑91 (MQ=255) atataCACTCCAACGTAGAGTTTCTCGAAAGATACTTTGTGTTGGAGTGTTTTTTTAGGTATGTGACATATTGGGGAATGCTTAGTAtgtg < 1:2982375/91‑1 (MQ=255) tataCACTCCAACGTAGAGTTTCTCGAAAGATACTTTGTGTTGGAGTGTTTTTTTAGGTATGTGACATATTGGGGAATGCTTAGTATGTGa > 1:3023779/1‑91 (MQ=255) tataCACTCCAACGTAGAGTTTCTCGAAAGATACTTTGTGTTGGAGTGTTTTTTTAGGTATGTGACATATTGGGGAATGCTTAGTATGTGa < 1:1261771/91‑1 (MQ=255) tataCACTCCAACGTAGAGTTTCTCGAAAGATACTTTGTGTTGGAGTGTTTTTTTAGGTATGTGACATATTGGGGAATGCTTAGTATGTGa < 1:3053375/91‑1 (MQ=255) tataCACTCCAACGTAGAGTTTCTCGAAAGATACTTTGTGTTGGAGTGTTTTTTTAGGTATGTGACATATTGGGGAATGCTTAGTATGTGa > 1:1769469/1‑91 (MQ=255) ataCACTCCAACGTAGAGTTTCTCGAAAGATACTTTGTGTTGGAGTGTTTTTTTATGTATGTGACATATTGGGGAATGCTTAGTATGTGaa > 2:781309/1‑91 (MQ=255) ataCACTCCAACGTAGAGTTTCTCGAAAGATACTTTGTGTTGGAGTGTTTTTTTAGGTATGTGACATATTGGGGAATGCTTAGTATGTGaa < 1:3167153/91‑1 (MQ=255) taCACTCCAACGTAGAGTTTCTCGAAAGATACTTTGTGTTGGAGTGTTTTTTTAGGTATGTGACATATTGGGGAATGCTTAGTATGTGAAt < 2:3523699/91‑1 (MQ=255) | GCTATGATTGAAGCGGTCAGAATTACATTGAAAAATGCATTGGCAATGGTCGGTGTAAGCGCACCTGAATCAATGTAAGAACATTTATATACACTCCAACGTAGAGTTTCTCGAAAGATACTTTGTGTTGGAGTGTTTTTTTAGGTATGTGACATATTGGGGAATGCTTAGTATGTGAAT > USA300TCH1516_ALE/671298‑671477 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |