| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | 801949 = | 216 (1.130) | 14 (0.080) | 7/156 | NT | 6.5% | intergenic (+190/+434) | USA300HOU_RS03915/USA300HOU_RS03920 | Putative 5'(3')‑deoxyribonucleotidase/Putative lipid kinase |
| ? | USA300TCH1516_ALE | = 848322 | 190 (1.020) | intergenic (+327/‑553) | trxB/USA300HOU_RS04145 | Thioredoxin reductase/Nucleotide‑binding protein | |||||
Only 100 of 259 total aligned reads displayed.
ATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCTGTGACT > USA300TCH1516_ALE/801859‑802039 | tgtagtggttcttaaacattagccacagctaatgtgtacttaaaaataggaatacatgagtaaaactcatgcataagaaatactaatttct > 2:12038‑M1/91‑91 (MQ=255) tatTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATa < 1:2837865/91‑1 (MQ=255) tatTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATa < 1:1468012/91‑1 (MQ=255) gtagtggttcttaaacattagccacagctaatgtgtacttaaaaataggaatacatgagtaaaactcatgcataagaaatactaatttcTa > 2:768577‑M1/90‑91 (MQ=255) gtagtggttcttaaacattagccacagctaatgtgtacttaaaaataggaatacatgagtaaaactcatgcataagaaatactaatttcTa < 1:950172‑M1/2‑1 (MQ=255) tGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAg > 2:354193/1‑91 (MQ=255) gCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGaa < 2:933974/91‑1 (MQ=255) gCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGaa < 2:2230668/91‑1 (MQ=255) gCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGaa < 2:295763/91‑1 (MQ=255) cAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGaaa < 2:113113/91‑1 (MQ=255) agtagtTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAAt > 1:2398947/1‑91 (MQ=255) agtCGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACGTAAAGAAATACt < 1:3001597/91‑1 (MQ=255) gtTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACtt > 2:1128303/1‑91 (MQ=255) gtTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACtt < 1:2553213/91‑1 (MQ=255) aactaCTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACtt > 1:2368916/5‑91 (MQ=255) gACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCACTTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACttttt > 1:3272260/1‑91 (MQ=255) gACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACttttt > 1:2045470/1‑91 (MQ=255) cTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCt > 2:2426912/1‑91 (MQ=255) ggCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCtt < 2:1474422/90‑1 (MQ=255) aaacacagctaatgtgtatttaaaaataggaatacatgagtaaaactcatgtataagaaatactaatttcTAAAGAAATACTTTTTCTTTa > 2:1798149‑M1/71‑91 (MQ=255) gggCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGa < 2:1957833/91‑1 (MQ=40) gggCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGa > 1:2900467/1‑91 (MQ=255) gggCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGa > 1:543735/1‑91 (MQ=255) gCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGaaa < 2:2276659/91‑1 (MQ=255) cccAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAAtt > 1:2643812/1‑91 (MQ=255) ccAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTa > 1:2462021/1‑91 (MQ=255) cAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAg < 1:1304099/91‑1 (MQ=255) taatgtgtatttaaaaataggaatacatgagtaaaactcatgcataagaaatactaatttcTAAAGAAATACTTTTTCTTTAGAAATTAGt > 1:675678‑M1/62‑91 (MQ=255) taatgtgtacttaaaaataggaatacatgagtaaaactcatgcataagaaatactaatttcTAAAGAATTACTTTTTCTTTAGAAATTAGt > 1:1717506‑M1/62‑91 (MQ=255) caatgtgcacttaagaataggaatacatgagtaaaagtcatgtataagaaatactaatttcTAAAGAAATACTTTTTCTTTAGAAATTAGt > 2:3838388‑M1/62‑91 (MQ=255) aaCATAGGGAAATTGGAACGACAATTGCAAGAGACAATTCTAGCTGGGGATGGCCACACTATAAAGAACTACTTTTTCTTTAGAAATTAGt < 2:1555214/91‑1 (MQ=9) aaCATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGt < 1:1654226/91‑1 (MQ=255) aaCATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGt > 2:669516/1‑91 (MQ=255) aaCATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGt < 1:335696/91‑1 (MQ=255) aCATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTa < 1:1632350/91‑1 (MQ=255) cATAGAGTAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTAt > 2:397231/1‑91 (MQ=255) aTAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTAtt > 1:1923869/1‑91 (MQ=255) aTAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTAtt < 1:2640195/91‑1 (MQ=255) tAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTAttt > 2:1633232/1‑91 (MQ=255) tAGAGAAAGTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTAttt < 2:3680243/91‑1 (MQ=255) gtgtacttaaaaatatgaatgcatgagttacactcatgcataagaaatactaatttcTAAAGAAATACTTTTTCTTTAGAAATTAGTAttt > 1:2700192‑M1/58‑91 (MQ=255) tgtatttaaaaataggaatacatgagtaaaactcatgtataagaaatactaatttcTAAAGAAATACTTTTTCTTTAGAAATTAGTATTTc > 1:100333‑M1/57‑91 (MQ=255) gtatttaaaaataggaatacatgagtaaaactcatgcataagaaatactaatttcTAAAGGAATACTTTTTCTTTAGAAATTAGTATTTCt > 1:437540‑M1/56‑91 (MQ=255) gagaAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCt < 1:3304398/91‑1 (MQ=255) agaAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCtt > 1:2367533/1‑91 (MQ=255) gaAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTa > 1:3598316/1‑91 (MQ=255) gaAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTa < 1:1045524/91‑1 (MQ=255) ttGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCa > 2:2845948/1‑91 (MQ=255) ggAACGCCAATTTCTACAGACAATGTAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATAAGTATTTCTTATGCATg > 1:3330559/1‑91 (MQ=255) ggAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATg > 2:2078695/1‑91 (MQ=255) ggAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATg > 1:865235/1‑91 (MQ=255) gAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGa > 2:2257515/1‑91 (MQ=255) gAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGa > 2:610099/1‑91 (MQ=255) aaCGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAg > 1:2441806/1‑91 (MQ=255) aaCGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAg > 2:197318/1‑91 (MQ=255) aCGCCAATTTCTACAGGCAATGCGAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAgt < 2:2729167/91‑1 (MQ=255) cGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAgtg < 2:1020731/91‑1 (MQ=255) cGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAgtg < 2:2910082/91‑1 (MQ=255) gCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAgtta < 1:1556996/91‑3 (MQ=255) ccAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAgttac < 2:1854344/91‑4 (MQ=255) ccAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTa > 1:729771/1‑91 (MQ=255) ccAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTa > 1:3526341/1‑91 (MQ=255) cAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAgttaca < 1:1867896/91‑5 (MQ=255) cAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAgttaca < 1:557642/91‑5 (MQ=255) cAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTaa > 1:2353202/1‑91 (MQ=255) aaTTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAAc < 2:1671875/91‑1 (MQ=255) tCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCAt > 2:2330141/1‑91 (MQ=255) tACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGc > 1:1034937/1‑91 (MQ=255) tACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGc > 1:1268881/1‑91 (MQ=255) cAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCAt > 1:2222540/1‑91 (MQ=255) aGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCAtt > 2:705791/1‑91 (MQ=255) aGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCAtt < 1:2078800/91‑1 (MQ=255) aCAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCa < 1:580339/91‑1 (MQ=255) tGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATAtt > 2:3658773/1‑91 (MQ=255) tGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAACTAGTATTTCTTATGCATGAGTGTAACACATGCATTCATAtt > 2:3405092/1‑91 (MQ=255) gCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATAttt < 2:136271/91‑1 (MQ=255) gCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATAttt > 2:3260697/1‑91 (MQ=255) cAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATAtttt < 1:3038915/91‑1 (MQ=255) cAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATAtttt < 1:3405208/91‑1 (MQ=255) gTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTaa > 1:369149/1‑91 (MQ=255) ttGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAg < 1:3116310/91‑1 (MQ=255) tGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGt < 1:3832216/91‑1 (MQ=255) ggggTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTa > 1:162727/1‑91 (MQ=255) gggTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTac > 1:1225479/1‑91 (MQ=255) gggTGGGACCCAACATAAGGACATACTTTGGCTTTAGGAGTTAGGATTGCTTATGCATGAGGGTAACTCATGCATTCATATTTTTAAGTac < 2:2633278/91‑1 (MQ=18) gTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAAc > 1:1787112/1‑65 (MQ=255) gTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTacac < 2:2801364/91‑1 (MQ=255) gTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTacac < 2:2764346/91‑1 (MQ=255) tGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTAcaca < 1:397231/91‑1 (MQ=255) ggCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACAtt > 1:223904/1‑91 (MQ=255) ggCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACAtt > 1:2265979/1‑91 (MQ=255) cAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCtg > 1:1156741/1‑91 (MQ=255) cAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCtg > 2:486255/1‑91 (MQ=255) aCATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCtgtg < 2:2600446/91‑1 (MQ=255) aTAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCTGTGAc > 1:1905477/1‑91 (MQ=255) aTAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCTGTGAc < 2:2045470/91‑1 (MQ=255) aTAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCTGTGAc > 1:3687283/1‑91 (MQ=255) TAAAGAAATACTTTTTCTTTAGTAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCTGTGACt > 2:3121207‑M1/1‑91 (MQ=255) TAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCTGTGACt > 1:3837842‑M1/1‑91 (MQ=255) TAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCTGTGACt > 1:59033‑M1/1‑91 (MQ=255) | ATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCTGTGACT > USA300TCH1516_ALE/801859‑802039 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |