| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | = 891727 | 133 (0.700) | 15 (0.080) | 8/152 | NT | 8.7% | intergenic (+145/‑594) | USA300HOU_RS04385/rnmV_2 | hypothetical protein/Ribonuclease M5 |
| ? | USA300TCH1516_ALE | = 1695091 | 190 (1.050) | intergenic (‑297/+233) | hemN_1/lepA | Oxygen‑independent coproporphyrinogen‑III oxidase‑like protein YqeR/Elongation factor 4 | |||||
Only 100 of 199 total aligned reads displayed.
GGGAGTGGGACATAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAAT‑CCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGAAAAAA > USA300TCH1516_ALE/891637‑891817 | gggAGTGGGACATAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAAT‑CCAATTTCT > 1:2330264‑M1/1‑91 (MQ=255)gggAGTGGGACATAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAAT‑CCAATTTCT > 2:2115221‑M1/1‑91 (MQ=255)gggAGTGGGACATAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAAT‑CCAATTTCT > 2:3303370‑M1/1‑91 (MQ=255)gggAGTGGGACATAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGCGAAT‑CCAATTTCT > 1:3878462‑M1/1‑91 (MQ=255)gggAGTGGGACATAAATGACATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAAT‑CCAATTTCT > 2:3391804‑M1/1‑91 (MQ=255) gAGTGGGACATAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAAT‑CCTATTTctct > 2:2434353/1‑91 (MQ=21) gAGTGGGACATAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAAT‑CCAATTTctct > 1:3679502/1‑91 (MQ=34) aGTGGGACATAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAAT‑CCAATTTCTCtt > 2:114839/1‑91 (MQ=34) tGGGACATAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAAT‑CCAATTTCTCTttg > 2:280476/1‑91 (MQ=34) tGGGACATAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAAT‑CCAATTTCTCTttg > 2:2860261/1‑91 (MQ=34) tGGGACATAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAAT‑CCAATTTCTCTttg > 1:1753756/1‑91 (MQ=34) gggACATAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAAT‑CCAATTTCTCTttgt > 1:2149449/1‑91 (MQ=34) ggACATAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAAT‑CCAATTTCTCTttgtt < 1:2874095/91‑1 (MQ=34) gACATAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAAT‑CCAATTTCTCTttgttg > 2:2748444/1‑91 (MQ=34) gACATAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAAT‑CCAATTTCTCTttgttg > 1:686999/1‑91 (MQ=34) aCATAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCGTTGTCTGTAGAAATTGGGAAT‑CCAATTTCTCTTTGTTgg < 2:1252064/91‑1 (MQ=18) aCATAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAAT‑CCAATTTCTCTTTGTTgg < 1:1829423/91‑1 (MQ=34) tAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAAT‑CCAATTTCTCTTTGTTGGGGc > 2:2166801/1‑91 (MQ=31) tGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGATTC‑CCAATTTCTacagacaatgcaagtt < 2:1822618‑M1/91‑17 (MQ=255) tCGTAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATT‑GGATTCCCAATTTCTacagacaatgcaagttggggtggg < 1:1045279‑M1/91‑25 (MQ=255) aaaTTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTCTAGAAATTGGATTC‑CCAATTTCTagagacaatgcaagttggggtgggacgac < 1:1373527‑M1/91‑30 (MQ=255) aaTTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGCAT‑CCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCAtt > 2:1039909/1‑91 (MQ=17) aaTTTATTCCGTCGTCCCACCCCAACCTGCATTGTCTGTAGAAATTGGGAAT‑CCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGAAtt > 2:2558412/1‑91 (MQ=255) atttatttCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGATTC‑CCAATTTCTacagacaatgcaagttggggtgggacgacga < 1:1032747‑M1/91‑32 (MQ=255) tttatttCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAAT‑CCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGc < 1:1337931/91‑1 (MQ=34) tttatttCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAAT‑CCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGc > 1:1561244/1‑91 (MQ=34) ttatttCGTCGTCCCACCCCAACTTGCATTGTCTGTAGGAATTGGGAAT‑CCAATTTCTCGTTGTTGGGGCCCATCCCCAGCTTGCATTGcc < 2:2669004/91‑1 (MQ=255) ttatttCGTCGTCCCACCCCAACTTGCATTGTCTCTAGAAATTGGATTC‑CCAATTTCTagagacaatgcaagttggggtgggacgacgaaa < 1:2454910‑M1/91‑34 (MQ=255) tatttCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAAT‑CCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCt > 2:3642985/1‑91 (MQ=37) tatttCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAAT‑CCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCt < 2:1475308/91‑1 (MQ=37) atttCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAAT‑CCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTg > 1:590028/1‑91 (MQ=38) atttCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAAT‑CCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTg < 2:2493920/91‑1 (MQ=38) atttCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAAT‑CCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTg > 1:2638774/1‑91 (MQ=38) atttCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAAT‑CCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTg > 1:2638598/1‑91 (MQ=38) atttCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAAT‑CCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTg > 2:1950213/1‑91 (MQ=38) atttCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAAT‑CCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTg < 2:1442903/91‑1 (MQ=38) tttCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAAT‑CCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGt > 2:639034/1‑91 (MQ=39) tttCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAAT‑CCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGt > 1:3417137/1‑91 (MQ=39) ttCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAAT‑CCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTa < 1:1467914/91‑1 (MQ=40) ttCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAAT‑CCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTa < 2:3215628/91‑1 (MQ=40) tcgtcgTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAAT‑CCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAg < 2:666083/91‑1 (MQ=255) gtcgtcCCGCCCCAACTTGCATTGTCTGTAGAAATTGGGAAT‑CCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGaa < 1:817032/91‑1 (MQ=255) gtcgtcCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAAT‑CCAATTTCTCTTTGTTGGGGCCTATCCCCAACTTGCATTGCCTGTAGaa < 2:2208204/91‑1 (MQ=255) gtcgtcCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAAT‑CCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGaa > 1:1305448/1‑91 (MQ=255) aCCCCAACTTGCATTGTCTGTAGAAATTGGGAAT‑CCTATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCtttt < 1:2434353/91‑1 (MQ=255) aCCCCAACTTGCATTGTCTGTAGAAATTGGGAAT‑CCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCtttt < 1:1730547/91‑1 (MQ=255) cccAACTTGCATTGTCTGTAGAAATTGGGAAT‑CCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCg > 2:3011231/1‑91 (MQ=255) cccAACTTGCATTGTCTGTAGAAATTGGGAAT‑CCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCg < 1:458410/91‑1 (MQ=255) cccAACTTGCATTGTCTGTAGAAATTGGGAAT‑CCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCg < 1:605851/91‑1 (MQ=255) aaCTTGCATTGTCTGTAGAAATTGGGAAT‑CCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGaaa < 2:1753756/91‑1 (MQ=255) cTTGCATTGTCTGTAGAAATTGGGAAT‑CCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAAtt < 1:3329113/91‑1 (MQ=255) ttGCATTGTCTGTAGAAATTGGGACT‑CCAATTTCTCCTTGTTTGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTCCCaaaccc > 2:3652742/1‑88 (MQ=14) tGCATTGTCTGTAGAAATTGGGAAT‑CCAATTGCTCTTTGTTGGGGCCCATCCCTAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATtct < 1:3097871/91‑1 (MQ=255) cATTGTCTGTAGAAATTGGGAAT‑CCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTctct < 1:3856764/91‑1 (MQ=255) cATTGTCTGTAGAAATTGGGAAT‑CCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTctct < 1:2269014/91‑1 (MQ=255) cATTGTCTGTAGAAATTGGGAAT‑CCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTctct > 1:2048018/1‑91 (MQ=255) cATTGTCTGTAGAAATTGGGAAT‑CCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTctct > 1:2185770/1‑91 (MQ=255) cATTGTCTCTAGAAATTGGGAAT‑CCAATTTCTagagacaatgcaagttggggtgggacgacgaaataaattttgtgaaaatatcatttctg > 1:957767‑M1/1‑32 (MQ=255) ttGTCTGTAGAAATTGGGAAT‑CCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCtgt > 1:1110109/1‑91 (MQ=255) tGTCTGTAGAAATTGGGAAT‑CCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCtgtg < 1:2387818/91‑1 (MQ=255) ggTCTGTAGAAATTGGGAAT‑CCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCtgtg < 2:230142/90‑1 (MQ=255) gTCTGTAGAAATTGGGAAT‑CCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTgtgt < 2:636086/91‑1 (MQ=255) gTCTGTAGAAATTGGGAAT‑CCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTgtgt < 2:98207/91‑1 (MQ=255) tCTGTAGAAATTGGGAAT‑CCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGtt < 2:3649189/91‑1 (MQ=255) cTGTAGAAATTGGGAAT‑CCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTg > 2:791599/1‑91 (MQ=255) tGTAGAAATTGGGAAT‑CCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTgg < 2:1868820/91‑1 (MQ=255) gTAGAAATTGGGAAT‑CCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTggg < 1:2202992/91‑1 (MQ=255) tAGAAATTGGGAAT‑CCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGCATTTCCTTTCGAAATTCTCTGTGTTgggg > 2:2380792/1‑91 (MQ=255) tAGAAATTGGGAAT‑CCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTgggg < 1:1911366/91‑1 (MQ=255) aGAAATTGGGAAT‑CCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGc < 1:568892/91‑1 (MQ=255) gAAATTGGGAAT‑CCAATTTCTacagacaatgcaagttggggtgggacgacgaaataaattttgcgaaaatatcatttatgtcccactccct > 1:3631430‑M1/1‑21 (MQ=255) gAAATTGGGAAT‑CCAATTTCTacagacaatgcaagttggggtgggacgacgaaataaattttacgataatatcatttctgtcccactccct > 1:1556132‑M1/1‑21 (MQ=255) aaTTGGGAAT‑CCAATTTCTacagacaatgcaagttggggtgggacgacgaaataaattttgcgaaaatatcatttctgtcccactcccatc > 2:1566931‑M1/1‑19 (MQ=255) aaTTGGGAAT‑CCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGcccc < 2:3555335/91‑1 (MQ=255) aTTGGGAAT‑CCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCt > 2:2810693/1‑91 (MQ=255) ttGGGAAT‑CCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTg < 2:572214/91‑1 (MQ=40) ggAAT‑CCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACt < 1:3141726/91‑1 (MQ=255) ggAAT‑CCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACt > 1:542866/1‑91 (MQ=255) gAAT‑CCAATTTCTCTTTGTTGGGGCCCATCCCCAACTAGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTa > 1:3276834/1‑91 (MQ=255) t‑CCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGaa < 1:3636831/91‑1 (MQ=255) ccAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAAt < 1:791599/91‑1 (MQ=255) ccAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAAt > 1:763539/1‑91 (MQ=255) ccAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAAt > 2:508762/1‑91 (MQ=255) ccAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAAt > 1:641864/1‑91 (MQ=40) aaTTTCTCTTTGTTGAGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGACATTCTCTGTGTTGGGGCCCCTGACTAGAATTg > 1:3314779/1‑91 (MQ=255) aTTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGa > 1:167259/1‑91 (MQ=255) aTTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGa < 2:2961753/91‑1 (MQ=255) tttCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGaa > 2:3455348/1‑91 (MQ=255) tttCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGaa < 2:414545/91‑1 (MQ=40) tttCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGaa < 1:851135/91‑1 (MQ=255) tttCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGaa > 2:936817/1‑91 (MQ=255) ttCTacaggcaatgcaagttggggtgggacgacgaaataaattttgcgaaaatatcatttctgtcccactcccttatgcatgagttttact > 2:1859028‑M1/1‑4 (MQ=255) tCTacaggcaatgcaagttggggtgggacgacgaaataaattttgcgaaaatatcatttctgtcccactcccttatgcatgagttttactc < 1:1701734‑M1/91‑89 (MQ=255) ctctTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGaaaaa < 1:1180950/91‑1 (MQ=255) cTacaggcaatgcaagttggggtgggacgacgaaataaattttgcgaaaatatcatttctgtcccactcccttatgcatgagttttactca < 1:366941‑M1/91‑90 (MQ=255) tctTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGaaaaaa < 2:3491191/91‑1 (MQ=255) tctTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGaaaaaa > 1:3695198/1‑91 (MQ=255) tctTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGaaaaaa < 1:2571733/91‑1 (MQ=255) tacaggcaatgcaagttggggtgggacgacgaaataaattttgcgaaaatatcatttctgtcccactcccttatgcatgagttttactcat > 2:3877593‑M1/1‑1 (MQ=255) tacaggcaatgcaagttggggtgggacgacgaaataaattttgcgaaaatatcatttctgtcccactcccatatgcatgagttttactcat > 1:2736001‑M1/1‑1 (MQ=255) | GGGAGTGGGACATAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAAT‑CCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGAAAAAA > USA300TCH1516_ALE/891637‑891817 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |