| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | 893176 = | 213 (1.120) | 13 (0.080) | 9/136 | NT | 7.2% | intergenic (+177/‑73) | trxA_1/metN2 | Thioredoxin/Methionine import ATP‑binding protein MetN 2 |
| ? | USA300TCH1516_ALE | 893212 = | 153 (0.950) | intergenic (+213/‑37) | trxA_1/metN2 | Thioredoxin/Methionine import ATP‑binding protein MetN 2 | |||||
Only 100 of 297 total aligned reads displayed.
CCTACGAAGCCCGGCAACCGTCTTATATAGAAATGGTGCCAATTCACATAAAGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGGGAGGAATCAACGTGATTGAATTAAAAGAA > USA300TCH1516_ALE/893086‑893266 | ccTACGAAGCCCGGCAACCGTCTTATATAGAAATGGTGCCAATTCACATAAAGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTAtt > 2:1480037/1‑91 (MQ=255) acttctttatttttagtccgatattctttaacaacttcttttaattcaatcacgttgattcctccctgtgttgcttaataaaataaaaaat < 2:584300‑M1/1‑1 (MQ=255) acttctttatttttagtccgatattctttaacaacttcttttaattcaatcacgttgattcctccctgtgttgcttaataaaataaaaaat > 1:767361‑M1/91‑91 (MQ=255) tACGAGGCCCGGCAACCGTCTTATATAGAAATGGTGCCAATTCACATAAAGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGc < 1:2743658/91‑1 (MQ=255) cttctttatttttagtccgatattctttaacaacttcttttaattcaatcacgttgattcctccctgtgttgcttaataaaataaaaaaTg < 1:2563577‑M1/2‑1 (MQ=255) cttctttatttttagtccgatattctttaacaacttcttttaattcaatcacgttgattcctccctgtgttgcttaataaaataaaaaaTg < 2:2496305‑M1/2‑1 (MQ=255) ttctttatttttagtccgatattctttaacaacttcttttaattcaatcacgttgattcctccctgtgttgcttaataaaataaaaaaTGc < 2:3736162‑M1/3‑1 (MQ=255) aCGAAGCCCGGCAACCGTCTTATATAGAAATGGTGCCAATTCACATAAAGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCt > 1:1068250/1‑91 (MQ=255) aCGAAGCCCGGCAACCGTCTTATATAGAAATGGTGCCAATTCACATAAAGATTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGcc > 2:1619349/1‑90 (MQ=255) tctttatttttagtccgatattctttaacaacttcttttaattcaatcacgttgattcctccctgtgttgcttaataaaataaaaaaTGCt < 2:201634‑M1/4‑1 (MQ=255) cGAAGCCCGGCAACCGTCTTATATAGAAATGGTGACAATTCACAAAAAGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCtt < 1:485379/91‑1 (MQ=255) ctttatttttagtccgatattctttaacaacttcttttaattcaatcacgttgattcctccctgtgttgcttaataaaataaaaaaTg > 2:521086‑M1/87‑88 (MQ=255) ctttatttttagtccgatattctttaacaacttcttttaattcaatcacgttgattcctccctgtgttgcttaataaaataaaaaaTg < 1:521086‑M1/2‑1 (MQ=255) ctttatttttagtccgatattctttaacaacttcttttaattcaatcacgttgattcctccctgtgttgcttaataaaataaaaaaTGCtt < 1:3202326‑M1/5‑1 (MQ=255) aaGCCCGGCAACCGTCTTATATAGAAATGGTGCCAATTCACATAAAGTTTTAACTTTTGAAGATGAGAGAAAGCAATAGTAGTATTgtttc < 1:1246255/91‑5 (MQ=38) aaGCCCGGCAACCGTCTTATATAGAAATGGTGCCAATTCACATAAAGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTtc < 1:2618732/91‑1 (MQ=255) aGCCCGGCAACCGTCTTATATAGAAATGGTGCCAATTCACATAAAGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTtct < 1:181753/91‑1 (MQ=255) tatttttagtccgatattctttaacaacttcttttaattcaatcacgttgattcctccctgtgttgcttaataaaataaaaaaTGCTTtct > 1:2939709‑M1/84‑91 (MQ=255) tatttttagtccgatattctttaacaacttcttttaattcaatcacgttgattcctccctgtgttgcttaataaaataaaaaaTGCTTtct > 1:588023‑M1/84‑91 (MQ=255) cccGGCAACCGTCTTATATAGAAATGGTGCCAATTCACATAAAGTTTTAACTTTTGAAGATGAGAGAAAGCAATAGTAGTATTG‑TTtctct < 1:397347/91‑2 (MQ=37) cccGGCAACCGTCTTATATAGAAATGGTGCCAATTCACATAAAGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTTCTTTCTCa > 1:1012508/1‑91 (MQ=255) cccGGCAACCGTCTTATATAGAAATGGTGCCAATTCACATAAAGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCa > 1:16635/1‑91 (MQ=255) cccGGCAACCGTCTTATATAGAAATGGTGCCAATTCACATAAAGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCa > 2:3593572/1‑91 (MQ=255) tttttagtccgatattctttaacaacttcttttaattcaatcacgttgattcctccctgtgttgcttaataaaataaaaaaTGCTTTCTCa > 2:195350‑M1/82‑91 (MQ=255) tttttagtccgatattctttaacaacttcttttaattcaatcacgttgattcctccctgtgttgcttaataaaataaaaaaTGCTTTCTCa > 2:2557162‑M1/82‑91 (MQ=255) tttttagtccgatattctttaacaacttcttataattcaatcacgttgattcctacctgtgttgcttaataaaataaaaaaTGCTTTCTCa > 2:383498‑M1/82‑91 (MQ=255) ttttagtccgatattctttaacaacttcttttaattcaatcacgttgattcctccctgtgttgcttaataaaataaaaaaTGCTTTCTCaa < 1:2907176‑M1/11‑1 (MQ=255) cGGCAACCGTCTTATATAGAAATGGTGCCAATTCACATAAAGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAAt < 1:2022001/91‑1 (MQ=255) tttagtccgatattctttaacaacttcttttaattcaatcacgttgattcctccctgtgttgcttaataaaataaaaaaTGCTTTCTCAAt < 2:2158643‑M1/12‑1 (MQ=255) gCAACCGTCTTATATAGAAATGGTGCCAATTCACATAAAGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAAttt > 1:877717/1‑91 (MQ=255) aCCGTCTTATATAGAAATGGTGCCAATTCACATAAAGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTc > 1:2767042/1‑91 (MQ=255) ccGTCTTATATAGAAATGGTGCCAATTCACATAAAGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCt < 1:1768390/91‑1 (MQ=255) cGTCTTATATAGAAATGGTGCCAATTCACATAAAGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTa > 1:2837414/1‑91 (MQ=255) cGTCTTATATAGAAATGGTGCCAATTCACATAAAGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTa > 2:1931739/1‑91 (MQ=255) tCTTATATAGAAATGGTGCCAATTCACATAAAGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATc > 1:1411773/1‑91 (MQ=255) cTTATATAGAAATGGTGCCAATTCACATAAAGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCg > 2:1754320/1‑91 (MQ=255) ataGAAATGGTGCCAATTCACATAAAGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATAtt < 2:2052001/91‑1 (MQ=255) aaaTGGTGCCAATTCACATAAAGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCCATTTTTCTATCGATATTgaga < 2:3510202/91‑1 (MQ=255) aaTGGTGCCAATTCACATAAAGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGaa > 1:2865531/1‑91 (MQ=255) caacttcttttaattcaatcacgttgattcctccctgtgttgcttaataaaataaaaaaTGCTTTCTCAATTTTTCTATCGATATTGAGaa > 1:508652‑M1/60‑91 (MQ=255) aTGGTGCCAATTCACATAAAGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGaaa < 2:2347436/91‑1 (MQ=255) tGGTGCCAATTCACATAAAGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAg > 1:2361215/1‑91 (MQ=255) acttcttttaattcaatcacgttgattcctccctgtgttgcttaataaaataaaaaaTGCTTTCTCAATTTTTCTATCGATATTGAGAAAg > 1:267145‑M1/58‑91 (MQ=255) gTGCCAATTCACATAAAGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCa > 2:2640896/1‑91 (MQ=255) gTGCCAATTCACATAAAGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCa > 1:2226251/1‑91 (MQ=255) gCCAATTCACATAAAGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCAtt < 1:2693855/91‑1 (MQ=255) gCCAATTCACATAAAGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCAtt > 1:2410211/1‑91 (MQ=255) cAATTCACATAAAGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCAtttt < 2:1026402/91‑1 (MQ=255) cAATTCACATAAAGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCACAATTTTTCTATCGATATTGAGAAAGCAtttt < 2:3804364/91‑1 (MQ=255) aTTCACATAAAGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCAtttttt > 1:1100802/1‑91 (MQ=255) tCACATAAAGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTttttat < 2:54205/91‑1 (MQ=255) tCACATAAAGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTttttat < 2:1355335/91‑1 (MQ=255) aattcaatcacgttgattcctccctgtgttgcttaataaaataaaaaaTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTtttta > 2:106666‑M1/49‑91 (MQ=255) cacaTAAAGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTttttatt < 1:1387758/91‑1 (MQ=255) cacaTAAAGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTttttatt < 2:1280397/91‑1 (MQ=255) caTAAAGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTttttatttt > 2:1683612/1‑91 (MQ=255) caTAAAGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTttttatttt > 1:1706194/1‑91 (MQ=255) aTAAAGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTttttatttta > 2:3664992/1‑91 (MQ=255) aaaGCTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTttattttatt > 1:3067986/1‑91 (MQ=255) aGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTaa < 1:1961766/91‑1 (MQ=255) ttttAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGc < 1:116088/91‑1 (MQ=255) aaCTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATTGATATTGAGAAAGCATTTTTTATCATATTAATCAaca < 2:1796168/91‑1 (MQ=255) aCTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAacac < 2:1111526/91‑1 (MQ=255) aCTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAacac > 1:1306516/1‑91 (MQ=255) cTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAAcaca > 1:980994/1‑91 (MQ=255) cTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAAcaca < 2:47546/91‑1 (MQ=255) cTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAAcaca > 1:3148545/1‑91 (MQ=255) ttGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAggg > 1:3371572/1‑91 (MQ=255) gAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGggag < 2:3189010/91‑1 (MQ=255) gAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGggag < 2:2608685/91‑1 (MQ=255) aaGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGggagg < 1:2468911/91‑1 (MQ=255) gATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGGGAGGaa < 2:897009/91‑1 (MQ=255) aTGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGGGAGGAAt > 2:2022749/1‑91 (MQ=255) tGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTTTTTTTTTTATCAACACAGGGAGGAATc > 2:3035913/1‑91 (MQ=255) tGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGGGAGGAATc > 1:2824294/1‑91 (MQ=255) tGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGGGAGGAATc > 2:2907741/1‑91 (MQ=255) tGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGGGAGGAATc < 2:1854872/91‑1 (MQ=255) gagagaAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGGGAGGAATCa > 2:2436464/1‑91 (MQ=255) agaAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGGGAGGAATCAACg > 2:3455576/1‑91 (MQ=255) aaa‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGGGAGGAATCAACGTg < 1:1443406/91‑1 (MQ=255) a‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGGGAGGAATCAACGTGAt > 1:3190985/1‑91 (MQ=255) cAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGGGAGGAATCAACGTGAtt < 1:2593506/91‑1 (MQ=255) aaTACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGGGAGGAATCAACGTGATTg < 2:2799921/91‑1 (MQ=255) aaTACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGGGAGGAATCAACGTGATTg > 1:3775375/1‑91 (MQ=255) aaTACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGGGAGGAATCAACGTGATTg < 1:214983/91‑1 (MQ=255) aTACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGGGAGGAATCAACGTGATTGa > 2:79655/1‑91 (MQ=255) tactacTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGGGAGGAATCAACGTGATTGaa > 2:2277686/1‑91 (MQ=255) tactaTTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACTCAGGGAGGAATCAACGTGATTGAATTa < 1:3424776/91‑1 (MQ=255) tactaTTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGGGAGGAATCAACGTGATTGAATTa > 2:3033479/1‑91 (MQ=255) tactaTTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGGGAGGAATCAACGTGATTGAATTa > 1:3748887/1‑91 (MQ=255) tactaTTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGGGAGGAATCAACGTGATTGAATTa < 1:2798825/91‑1 (MQ=255) tactaTTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGGGAGGAATCAACGTGATTGAATTa > 2:1655673/1‑91 (MQ=255) actaTTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGGGAGGAATCAACGTGATTGAATTaa < 2:1269191/91‑1 (MQ=255) actaTTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGGGAGGAATCAACGTGATTGAATTaa < 2:1234338/91‑1 (MQ=255) ctaTTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGGGAGGAATCAAGGTGATTGAATTaaa < 2:3295582/91‑1 (MQ=255) ctaTTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGGGAGGAATCAACGTGATTGAATTaaa > 1:2311381/1‑91 (MQ=255) ctaTTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGGGAGGAATCAACGTGATTGAATTaaa > 1:3668507/1‑91 (MQ=255) ctaTTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGGGAGGAATCAACGTGATTGAATTaaa > 2:2748250/1‑91 (MQ=255) ctaTTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGGGAGGAATCAACGTGATTGAATTaaa < 2:258308/91‑1 (MQ=255) taTTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGGGAGGAATCAACGTGATTGAATTaaaa < 1:161186/91‑1 (MQ=255) | CCTACGAAGCCCGGCAACCGTCTTATATAGAAATGGTGCCAATTCACATAAAGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGGGAGGAATCAACGTGATTGAATTAAAAGAA > USA300TCH1516_ALE/893086‑893266 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |