| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | 1036446 = | 211 (1.110) | 14 (0.090) | 6/138 | NT | 7.7% | intergenic (+376/‑968) | USA300TCH1516_00963/USA300TCH1516_00964 | hypothetical protein/hypothetical protein |
| ? | USA300TCH1516_ALE | 1036485 = | 152 (0.930) | intergenic (+415/‑929) | USA300TCH1516_00963/USA300TCH1516_00964 | hypothetical protein/hypothetical protein | |||||
Only 100 of 288 total aligned reads displayed.
AACGCATTACATTTAATGTTAAGTTTCGGTATGTTTATCGTCACTTTCATTGGTATAGTAGTAGCAATAATAAATTTAAGCAATAAAAAATAACCATCATTTCAAAACTTTGACATAGAATGATGGTTAAAGAAAATCTCATTTAGTCACCGTCTTTTTAACGGGCTCATTAGGCGACATG > USA300TCH1516_ALE/1036356‑1036536 | atgttactataaaaatgtaaaaatacgacatgcaggaacatgtcgcataatgagcccgttaaaaagacggtgactaaatgagattttcttt < 1:3074546‑M1/1‑1 (MQ=255)atgttactataaaaatgtaaaaagacgacatgcaggaacatgtcgcctaatgagcccgttaaaaagacggtgactaaatgagattttcttt < 1:1850139‑M1/1‑1 (MQ=255) tgttactataaaaatgtaaaaagacgacatgcaggaacatgtcgcctaatgagcccgttaaaaagacggtgactaaatgagattttcttTa > 1:2850288‑M1/90‑91 (MQ=255) aCGCATTACATTTAATGTTAAGTTTCGGTATGTTTATCGTCACTTTCATTGGTATAGTAGTAGCAATAATAAATTTAAGCAATAAAAAATa > 2:1334637/1‑91 (MQ=255) gttactataaaagtgtaaaaagacgacatgcaggaacatgtcgcctaatgagcccgttaaaaagacggtgactaaatgagattttcttTaa < 2:1847385‑M1/3‑1 (MQ=255) gttactataaaaatgtaaaaagacgacatgcaggaacatgtcgcctaatgagcccgttaaaaagacggtgactaaatgagattttcttTaa < 1:3690369‑M1/3‑1 (MQ=255) ttactataaaaatgtaaaaagacgacatgcaggaacatgtcgcctaatgagcccgttaaaaagacggtgactaaatgagattttcttTAAc < 2:1268823‑M1/4‑1 (MQ=255) ttactataaaaatgtaaaaagacgacatgcaggaacatgtcgcctaatgagcccgttaaaaagacggtgactaaatgagattttcttTAAc < 2:1855824‑M1/4‑1 (MQ=255) tactataaaaatgtaaaaagacgacatgcaggaacatgtcgcctaatgagcccgttaaaaagacggtgactaaatgagattttcttTAAcc > 1:539650‑M1/87‑91 (MQ=255) tactataaaaatgtaaaaagacgacatgcaggaacatgtcgcctaatgagcccgttaaaaagacggtgactaaatgagattttcttTAAcc > 1:1670666‑M1/87‑91 (MQ=255) cATTACATTTAATGTTAAGTTTCGGTATGTTTATCGTCACTTTCATTGGTATAGTAGTAGCAATAATAAATTTAAGCAATAAAAAATAAcc > 1:1483040/1‑91 (MQ=255) cATTACATTTAATGTTAAGTTTCGGTATGTTTATCGTCACTTTCATTGGTATAGTAGTAGCAATAATAAATTTAAGCAATAAAAAATAAcc > 1:3011844/1‑91 (MQ=255) ttACATTTAATGTTAAGTTTCGGTATGTTTATCGTCACTTTCATTGGTATAGTAGTAGCAATAATAAATTTAAGCAATAAAAAATAACcat < 1:814307/91‑1 (MQ=255) ttACATTTAATGTTAAGTTTCGGTATGTTTATCGTCACTTTCATTGGTATAGTAGTAGCAATAATAAATTTAAGCAATAAAAAATAACcat > 1:243752/1‑91 (MQ=255) ttACATTTAATGTTAAGTTTCGGTATGTTTATCGTCACTTTCATTGGTATAGTAGTAGCAATAATAAATTTAAGCAATAAAAAATAACcat < 1:117564/91‑1 (MQ=255) ctataaaaatgtaaaaagacgacatgcaggaacatgtcgcctaatgagcccgttaaaaagacggtgactaaatgagattttcttTAACcat > 1:2359539‑M1/85‑91 (MQ=255) tACATTTAATGTTAAGTTTCGGTATGTTTATCGTCACTTTCATTGGTATAGTAGTAGCAATAATAAATTTAAGCAATAAAAAATAACcatc > 1:1265249/1‑91 (MQ=255) tACATTTAATGTTAAGTTTCGGTATGTTTATCGTCACTTTCATTGGTATAGTAGTAGCAATAATAAATTTAAGCAATAAAAAATAACcatc < 2:2251192/91‑1 (MQ=255) aCATTTAATGTTAAGTTTCGGTATGTTTATCGTCACTTTCATTGGTATAGTAGTAGCAATAATAAATTTAAGCAATAAAAAATAACcatca > 2:234273/1‑91 (MQ=255) taaaaatgtaaaaagacgacatgcaggaacatgtcgcctaatgagcccgttaaaaagacggtgactaaatgagattttcttTAACcatcat < 1:1594448‑M1/10‑1 (MQ=255) cATTTAATGTTAAGTTTCGGTATGTTTATCGTCACTTTCATTGGTATAGTAGTAGCAATAATAAATTTAAGCAATAAAAAATAACcatcat > 2:3824948/1‑91 (MQ=255) aTTTAATGTTAAGTTTCGGTATGTTTATCGTCACTTTCATTGGTATAGTAGTAGCAATAATAAATTTAAGCAATAAAAAATAACCATCAtt < 1:3648993/91‑1 (MQ=255) tttAATGTTAAGTTTCGGTATGTTTATCGTCACTTTCATTGGTATAGTAGTAGCAATAATAAATTTAAGCAATAAAAAATAACCATCAttt < 2:241240/91‑1 (MQ=255) tttAATGTTAAGTTTCGGTATGTTTATCGTCACTTTCATTGGTATAGTAGTAGCAATAATAAATTTAAGCAATAAAAAATAACCATCAttt > 2:2011214/1‑91 (MQ=255) tttAATGTTAAGTTTCGGTATGTTTATCGTCACTTTCATTGGTATAGTAGTAGCAATAATAAATTTAAGCAATAAAAAATAACCATCAttt < 1:102474/91‑1 (MQ=255) ttAATGTTAAGTTTCGGTATGTTTATCGTCACTTTCATTGGTATAGTAGTAGCAATAATAAATTTAAGCAATAAAAAATAACCATCATTTc < 1:1621212/91‑1 (MQ=255) tAATGTTAAGTTTCGGTATGTTTATCGTCACTTTCATTGGTATAGTAGTAGCAATAATAAATTTAAGCAATAAAAAATAACCATCATTTCa < 2:3020604/91‑1 (MQ=255) tAATGTTAAGTTTCGGTATGTTTATCGTCACTTTCATTGGTATAGTAGTAGCAATAATAAATTTAAGCAATAAAAAATAACCATCATTTCa > 1:3793211/1‑91 (MQ=255) tAATGTTAAGTTTCGGTATGTTTATCGTCACTTTCATTGGTATAGTAGTAGCAATAATAAATTTAAGCAATAAAAAATAACCATCATTTCa < 1:1798018/91‑1 (MQ=255) tAATGTTAAGTTTCGGTATGTTTATCGTCACTTTCATTGGTATAGTAGTAGCAATAATAAATTTAAGCAATAAAAAATAACCATCATTTCa < 1:440145/91‑1 (MQ=255) aaTGTTAAGTTTCGGTATGTTTATCGTCACTTTCATTGGTATAGTAGTAGCAATAATACATTCAAGCAATAAAAAATAACCATCATTTCaa > 2:1452161/1‑91 (MQ=255) aaTGTTAAGTTTCGGTATGTTTATCGTCACTTTCATTGGTATAGTAGTAGCAATAATAAATTTAAGCAATAAAAAATAACCATCATTTCaa > 2:1363122/1‑91 (MQ=255) gTTAAGTTTCGGTATGTTTATCGTCACTTTCATTGGTATAGTAGTAGCAATAATAAATTTAAGCAATAAAAAATAACCATCATTTCAAAAc < 2:709914/91‑1 (MQ=255) gTTAAGTTTCGGTATGTTTATCGTCACTTTCATTGGTATAGTAGTAGCAATAATAAATTTAAGCAATAAAAAATAACCATCATTTCAAAAc < 2:3608409/91‑1 (MQ=255) aaGTTTCGGTATGTTTATCGTCACTTTCATTGGTATAGTAGTAGCAATAATAAATTTAAGCAATAAAAAATAACCATCATTTCAAAACttt < 1:42302/91‑1 (MQ=255) aaGTTTCGGTATGTTTATCGTCACTTTCATTGGTATAGTAGTAGCAATAATAAATTTAAGCAATAAAAAATAACCATCATTTCAAAACttt < 1:3335289/91‑1 (MQ=255) aGTTTCGGTATGTTTATCGTCACTTTCATTGGTATAGTAGTAGCAATAATAAATTTAAGCAATAAAAAATAACCATCATTTCAAAACTTTg < 2:1167409/91‑1 (MQ=255) tttCGGTATGTTTATCGTCACTTTCATTGGTATAGTAGTAGCAATAATAAATTTAAGCAATAAAAAATAACCATCATTTCAAAACTTTGAc > 2:787778/1‑91 (MQ=255) ttCGGTATGTTTATCGTCACTTTCATTGGTATAGTAGTAGCAATAATAAATTTAAGCAATAAAAAATAACCATCATTTCAAAACTTTGACa > 1:2135086/1‑91 (MQ=255) tCGGTATGTTTATCGTCACTTTCATTGGTATAGTAGTAGCAATAATAAATTTAAGCAATAAAAAATAACCATCATTTCAAAACTTTGACAt < 1:2425178/91‑1 (MQ=255) tCGGTATGTTTATCGTCACTTTCATTGGTATAGTAGTAGCAATAATAAATTTAAGCAATAAAAAATAACCATCATTTCAAAACTTTGACAt < 1:1109556/91‑1 (MQ=255) cGGTATGTTTATCGTCACTTTCATTGGTATAGTAGTAGCAATAATAAATTTAAGCAATAAAAAATAACCATCATTTCAAAACTTTGACATa > 2:1542264/1‑91 (MQ=255) cGGTATGTTTATCGTCACTTTCATTGGTATAGTAGTAGCAATAATAAATTTAAGCAATAAAAAATAACCATCATTTCAAAACTTTGACATa > 1:960393/1‑91 (MQ=255) ggTATGTTTATCGTCACTTTCATTGGTATAGTAGTAGCAATAATAAATTTAAGCAATAAAAAATAACCATCATTTCAAAACTTTGACATAg > 2:611028/1‑91 (MQ=255) ggTATGTTTATCGTCACTTTCATTGGTATAGTAGTAGCAATAATAAATTTAAGCAATAAAAAATAACCATCATTTCAAAACTTTGACATAg < 2:3204815/91‑1 (MQ=255) tGTTTATCGTCACTTTCATTGGTATAGTAGTAGCAATAATAAATTTAAGCAATAAAAAATAACCATCATTTCAAAACTTTGACATAGAatg < 2:3398074/91‑1 (MQ=255) gTTTATCGTCACTTTCATTGGTATAGTAGTAGCAATAATAAATTTAAGCAATAAAAAATAACCATCATTTCAAAACTTTGACATAGAatga > 2:2599827/1‑91 (MQ=255) gTTTATCGTCACTTTCATTGGTATAGTAGTAGCAATAATAAATTTAAGCAATAAAAAATAACCATCATTTCAAAACTTTGACATAGAatga < 1:882361/91‑1 (MQ=255) tttATCGTCACTTTCATTGGTATAGTAGTAGCAATAATAAATTTAAGCAATAAAAAATAACCATCATTTCAAAACTTTGACATAGAatgat < 1:971700/91‑1 (MQ=255) aggaacatgtcgcctattgagcccgttaaaaagacggtgactaaatgagattttcttTAACCATCATTTCAAAACTTTGACATAGaa < 1:883853‑M1/30‑1 (MQ=255) ttATCGTCACTTTCATTGGTATAGTAGTAGCAATAATAAATTTAAGCAATAAAAAATAACCATCATTTCAAAACTTTGACATAGAattatg > 1:3137425/1‑91 (MQ=255) ttATCGTCACTTTCATTGGTATAGTAGTAGCAATAATAAATTTAAGCAATAAAAAATAACCATCATTTCAAAACTTTGACATAGAatgatg < 1:2953706/91‑1 (MQ=255) aTCGTCACTTTCATTGGTATAGTAGTAGCAATAATAAATTTAAGCAATAAAAAATAACCATCATTTCAAAACTTTGACATAGAATGATGGt > 2:323111/1‑91 (MQ=255) tCGTCACTTTCATTGGTATAGTAGTAGCAATAATAAATTTAAGCAATAAAAAATAACCATCATTTCAAAACTTTGACATAGAATGATGGtt > 2:1984691/1‑91 (MQ=255) atgtcgcctaatgagcccgttaaaaagacggtgactaaatgagattttcttTAACCATCGTTTCAAAACTTTGACATAGAATGATGGTTaa > 2:2961856‑M1/52‑91 (MQ=255) aCTTTCATTGGTATAGTAGTAGCAATAATAAATTTAAGCAATAAAAAATAACCATCATTTCAAAACTTTGACATAGAATGATGGTTAAAGa > 1:908332/1‑91 (MQ=255) aCTTTAATTGGTATAGTAGTAGCAATAATAAATTTAAACAATAAAAAATAACCATCATATCAAAACTTTGACATAGAATGATGGTTAAAGa < 2:888470/91‑1 (MQ=255) cgcctaatgagcccgttaaaaagacggtgactaaatgagattttcttTAACCATCATTTCAAAACTTTGACATAGAATGATGGTTAAAGaa > 1:3680944‑M1/48‑91 (MQ=255) cgcctaatgagcccgttaaaaagacggtgactaaatgagattttcttTAACCATCATTTCAAAACTTTGACATAGAATGATGGTTAAAGaa > 1:3517342‑M1/48‑91 (MQ=255) cTTTCATTGGTATAGTAGTAGCAATAATAAATTTAAGCAATAAAAAATAACCATCATTTCAAAACTTTGACATAGAATGATGGTTAAAGaa < 2:754245/91‑1 (MQ=255) gTATAGTAGTAGCAATAATAAATTTAAGCAATAAAAAATAACCATCATTTCAAAACTTTGACATAGAATGATGGTTAAAGAAAATCTCAtt > 1:2222165/1‑91 (MQ=255) tataGTAGTAGCAATAATAAATTTAAGCAATAAAAAATAACCATCATTTCAAAACTTTGACATAGAATGATGGTTAAAGAAAATCTCAttt < 1:2640208/91‑1 (MQ=255) tataGTAGTAGCAATAATAAATTTAAGCAATAAAAAATAACCATCATTTCAAAACTTTGACATAGAATGATGGTTAAAGAAAATCTCAttt > 2:812762/1‑91 (MQ=255) tataGTAGTAGCAATAATAAATTTAAGCAATAAAAAATAACCATCATTTCAAAACTTTGACATAGAATGATGGTTAAAGAAAATCTCAttt < 1:2086064/91‑1 (MQ=255) gtagtagCAATAATAAATTTAAGCAATAAAAAATAACCATCATTTCAAAACTTTGACATAGAATGATGGTTAAAGAAAATCTCATTTAGTc > 2:1331498/1‑91 (MQ=255) tagtagCAATAATCAATTTAAGCAATAAAAAATAACCATCATTGCAAAACTTTGACATAGAATGATGGTTAAAGAAAATCTCATTTAGTCa < 1:3885226/91‑1 (MQ=255) taaaaagacggtgactaaatgagattttcttTAACCATCATTTCCAAACTTTGACAACGAATGATGGTTAAAGAAAATCTCATTTAGTCAc > 2:1200659‑M1/32‑91 (MQ=255) agtagCAATAATAAATTTAAGCAATAAAAAATAACCATCATTTCAAAACTTTGACATAGAATGATGGTTAAAGAAAATCTCATTTAGTCAc > 1:765963/1‑91 (MQ=255) tagCAATAATAAATTTAAGCAATAAAAAATAACCATCATTTCAAAACTTTGACATAGAATGATGGTTAAAGAAAATCTCATTTAGTCACCg > 2:489910/1‑91 (MQ=255) agCAATAATAAATTTAAGCAATAAAAAATAACCATCATTTCAAAACTTTGACATAGAATGATGGTTAAAGAAAATCTCATTTAGTCACCGt > 2:2728245/1‑91 (MQ=255) agCAATAATAAATTTAAGCAATAAAAAATAACCATCATTTCAAAACTTTGACATAGAATGATGGTTAAAGAAAATCTCATTTAGTCACCGt > 1:3616919/1‑91 (MQ=255) cAATAATAAATTTAAGCAATAAAAAATAACCATCATTTCAAAACTTTGACATAGAATGATGGTTAAAGAAAATCTCATTTAGTCACCGTCt > 2:2532722/1‑91 (MQ=255) taataaATTTAAGCAATAAAAAATAACCATCATTTCAAAACTTTGACATAGAATGATGGTTAAAGAAAATCTCATTTAGTCACCGTCtttt > 1:2951722/1‑91 (MQ=255) taataaATTTAAGCAATAAAAAATAACCATCATTTCAAAACTTTGACATAGAATGATGGTTAAAGAAAATCTCATTTAGTCACCGTCtttt > 1:3231525/1‑91 (MQ=255) aataaATTTAAGCAATAAAAAATAACCATCATTTCAAAACTTTGACATAGAATGATGGTTAAAGAAAATCTCATTTAGTCACCGTCttttt < 1:122813/91‑1 (MQ=255) aataaATTTAAGCAATAAAAAATAACCATCATTTCAAAACTTTGACATAGAATGATGGTTAAAGAAAATCTCATTTAGTCACCGTCttttt < 2:2680120/91‑1 (MQ=255) ataaATTTAAGCAATAAAAAATAACCATCATTTCAAAACTTTGACATAGAATGATGGTTAAAGAAAATCTCATTTAGTCACCGTCTTTTTa > 1:2295379/1‑91 (MQ=255) ataaATTTAAGCAATAAAAAATAACCATCATTTCAAAACTTTGACATAGAATGATGGTTAAAGAAAATCTCATTTAGTCACCGTCTTTTTa > 1:2555226/1‑91 (MQ=255) taaATTTAAGCAATAAAAAATAACCATCATTTCAAAACTTTGACATAGAATGATGGTTAAAGAAAATCTCATTTAGTCACCGTCTTTTTaa < 2:299144/91‑1 (MQ=255) taaATTTAAGCAATAAAAAATAACCATCATTTCAAAACTTTGACATAGAATGATGGTTAAAGAAAATCTCATTTAGTCACCGTCTTTTTaa < 1:2505595/91‑1 (MQ=255) taaATTTAAGCAATAAAAAATAACCATCATTTCAAAACTTTGACATAGAATGATGGTTAAAGAAAATCTCATTTAGTCACCGTCTTTTTaa < 2:3873088/91‑1 (MQ=255) aaaTTTAAGCAATAAAAAATAACCATCATTTCAAAACTTTGACATAGAATGATGGTTAAAGAAAATCTCATTTAGTCACCGTCTTTTTAAc < 2:334088/91‑1 (MQ=255) aaTTTAAGCAATAAAAAATAACCATCATTTCAAAACTTTGACATAGAATGATGGTTAAAGAAAATCTCATTTAGTCACCGTCTTTTTAACg > 2:3690369/1‑91 (MQ=255) aaTTTAAGCAATAAAAAATAACCATCATTTCAAAACTTTGACATAGAATGATGGTTAAAGAAAATCTCATTTAGTCACCGTCTTTTTAACg < 2:3061155/91‑1 (MQ=255) aTTTAAGCAATAAAAAATAACCATCATTTCAAAACTTTGACATAGAATGATGGTTAAAGAAAATCTCATTTAGTCACCGTCTTATTAACgg > 2:3453434/1‑91 (MQ=255) tttAAGCAATAAAAAATAACCATCATTTCAAAACTTTGACATAGAATGATGGTTAAAGAAAATCTCATTTAGTCACCGTCTTTTTAACggg < 1:3354123/91‑1 (MQ=255) tttAAGCAATAAAAAATAACCATCATTTCAAAACTTTGACATAGAATGATGGTTAAAGAAAATCTCATTTAGTCACCGTCTTTTTAACggg > 1:3494548/1‑91 (MQ=255) ttAAGCAATAAAAAATAACCATCATTTCAAAACTTTGACATAGAATGATGGTTAAAGAAAATCTCATTTAGTCACCGTCTTTTTAACGGGc < 1:3472933/91‑1 (MQ=255) ttAAGCAATAAAAAATAACCATCATTTCAAAACTTTGACATAGAATGATGGTTAAAGAAAATCTCATTTAGTCACCGTCTTTTTAACGGGc < 1:2777003/91‑1 (MQ=255) cAATAAAAAATAACCATCATTTCAAAACTTTGACATAGAATGATGGTTAAAGAAAATCTCATTTAGTCACCGTCTTTTTAACGGGCTCAtt > 2:1562406/1‑91 (MQ=255) aaTAAAAAATAACCATCATTTCAAAACTTTGACATAGAATGATGGTTAAAGAAAATCTCATTTAGTCACCGTCTTTTTAACGGGCTCATTa > 1:1419264/1‑91 (MQ=255) aaaaaaTAACCATCATTTCAAAACTTTGACATAGAATGATGGTTAAAGAAAATCTCATTTAGTCACCGTCTTTTTAACGGGCTCATTAGGc < 2:3118767/91‑1 (MQ=255) aaaaaaTAACCATCATTTCAAAACTTTGACATAGAATGATGGTTAAAGAAAATCTCATTTAGTCACCGTCTTTTTAACGGGCTCATTAGGc > 2:2675611/1‑91 (MQ=255) aaaaTAACCATCATTTCAATACTTTGACATAGAATGATGGTTCAAGAAAATCTCATTTAGTCACCGACTTTTTAACGGGCTCATTAGGCgc > 1:2362649/1‑90 (MQ=17) aaaaTAACCATCATTTCAAAACTTTGACATAGAATGATGGTTAAAGAAAATCTCATTTAGTCACCGTCTTTTTAACGGGCTCATTAGGCGa < 1:476744/91‑1 (MQ=255) aaaaTAACCATCATTTCAAAACTTTGACATAGAATGATGGTTAAAGAAAATCTCATTTAGTCACCGTCTTTTTAACGGGCTCATTAGGCGa > 1:691671/1‑91 (MQ=255) aaaTAACCATCATTTCAAAACTTTGACATAGAATGATGGTTAAAGAAAATCTCATTTAGTCACCGTCTTTTTAACGGGCTCATTAGGCGAc < 2:3761595/91‑1 (MQ=255) aaTAACCATCATTTCAAAACTTTGACATAGAATGATGGTTAAAGAAAATCTCATTTAGTCACCGTCTTTTTAACGGGTTCATTAGGCGACa > 2:1779653/1‑91 (MQ=255) TAACCATCATTTCAAAACTTTGACATAGAATGATGGTTAAAGAAAATCTCATTTAGTCACCGTCTTTTTAACGGGCTCATTAGGCGACATg < 2:1384083‑M1/91‑1 (MQ=255) TAACCATCATTTCAAAACTTTGACATAGAATGATGGTTAAAGAAAATCTCATTTAGTCACCGTCTTTTTAACGGGCTCATTAGGCGACATg < 1:63925‑M1/91‑1 (MQ=255) | AACGCATTACATTTAATGTTAAGTTTCGGTATGTTTATCGTCACTTTCATTGGTATAGTAGTAGCAATAATAAATTTAAGCAATAAAAAATAACCATCATTTCAAAACTTTGACATAGAATGATGGTTAAAGAAAATCTCATTTAGTCACCGTCTTTTTAACGGGCTCATTAGGCGACATG > USA300TCH1516_ALE/1036356‑1036536 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |