| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | 1040357 = | 218 (1.140) | 18 (0.110) | 12/132 | NT | 9.6% | intergenic (+18/+70) | USA300TCH1516_00966/USA300TCH1516_00967 | putative ABC transporter ATP‑binding protein/hypothetical protein |
| ? | USA300TCH1516_ALE | 1040412 = | 160 (1.020) | intergenic (+73/+15) | USA300TCH1516_00966/USA300TCH1516_00967 | putative ABC transporter ATP‑binding protein/hypothetical protein | |||||
Only 100 of 301 total aligned reads displayed.
TGATATGGCTATTGCAAATCAATGTGACGAAATAATAGATTTAGAACAGTATAGAAAAGTAGCATCTATGTGATATCCAAAAGATAAAATTAAAAGCCAATCAATGGGAAATGTTGACTTCAACACTCCGTTTGATTGGCTTTTATACTGTGTTACTAAGTTATGAAAGTAACAACGGCAA > USA300TCH1516_ALE/1040267‑1040447 | tGATATGGCTATTGCAAATCAATGTGACGAAATAATAGATTTAGAACAGTATAGAAAAGTAGCATCTATGTGATATCCAAAAGATAAAAtt < 1:3758054/91‑1 (MQ=255)tGATATGGCTATTGCAAATCAATGTGACGAAATAATAGATTTAGAACAGTATAGAAAAGTAGCATCTATGTGATATCCAAAAGATAAAAtt > 2:708647/1‑91 (MQ=255) atatGGCTATTGCAAATCAATGTGACGAAATAATAGATTTAGAACAGTATAGAAAAGTAGCATCTATGTGATATCCAAAAGATAAAATTaa < 2:1064565/91‑1 (MQ=255) ttacatttattactaatcgtattaaatattattatattgctttttttcagtttgccgttgttactttcataacttagtaacacagtaTaaa < 1:2109933‑M1/4‑1 (MQ=255) tatGGCTATTGCAAATCAATGTGACGAAATAATAGATTTAGAACAGTATAGAAAAGTAGCATCTATGTGATATCCAAAAGATAAAATTaaa > 1:1832077/1‑91 (MQ=255) tacatttattactaatcgtattaaatattattatattgctttttttcagtttgccgttgttactttcataacttagtaacacagtaTaaaa < 2:2414685‑M1/5‑1 (MQ=255) tacatttattactaatcgtattaaatattattatattgctttttttcagtttgccgttgttactttcataacttagtaacacagtaTaaaa > 1:3577966‑M1/87‑91 (MQ=255) tGGCTATTGCAAATCAATGTGACGAAATAATAGATTTAGAACAGTATAGAAAAGTAGCATCTATGTGATATCCAAAAGATAAAATTAAAAg > 2:886132/1‑91 (MQ=255) tGGCTATTGCAAATCAATGTGACGAAATAATAGATTTAGAACAGTATAGAAAAGTAGCATCTATGTGATATCCAAAAGATAAAATTAAAAg < 2:3587248/91‑1 (MQ=255) acatttattactaatcgtattaaatattattatattgctttttttcagtttgccgttgttactttcataacttagtaacacagtaTAAAAg > 1:391571‑M1/86‑91 (MQ=255) acatttattactaatcgtattaaatattattatattgctttttttcagtttgccgttgttactttcataacttagtaacacagtaTAAAAg < 1:2686194‑M1/6‑1 (MQ=255) gCTATTGCAAATCAATGTGACGAAATAATAGATTTAGAACAGTATAGAAAAGTAGCATCTATGTGATATCCAAAAGATAAAATTAAAAGcc < 2:2776994/91‑1 (MQ=255) gCTATTGCAAATCAATGTGACGAAATAATAGATTTAGAACAGTATAGAAAAGTAGCATCTATGTGATATCCAAAAGATAAAATTAAAAGcc < 1:1699305/91‑1 (MQ=255) atttattactaatcgtattaaatattattatattgctttttttcagtttgccgttgttactttcataacttagtaacacagtaTAAAAGcc > 1:1037634‑M1/84‑91 (MQ=255) cTATTGCAAATCAATGTGACGAAATAATAGATTTAGAACAGTATAGAAAAGTAGCATCTATGTGATATCCAAAAGATAAAATTAAAAGCca < 2:3784884/91‑1 (MQ=255) ttattactaatcgtattaaatattattatattgctttttttcagtttgccgttgttactttcataacttagtaacacagtaTAAAAGCcaa > 1:2300921‑M1/82‑91 (MQ=255) tattactaatcgtattaaatattattatattgctttttttcagtttgccgttgttactttcataacttagtaacacagtaTAAAAGCcaat < 1:1579413‑M1/11‑1 (MQ=255) attactaatcgtattaaatattattatattgctttttttcagtttgccgttgttactttcataacttagtaacacagtaTAAAAGCcaatc > 1:2597561‑M1/80‑91 (MQ=255) tGCAAATCAATGTGACAAAATAATAGATTTAGAACAGTATAGAAAAGTAGCATCTATGTGATATCCAAAAGATAAAATTAAAAGCcaatca < 2:500031/91‑1 (MQ=255) aaaTCAATGTGACGAAATAATAGATTTAGAACAGTATAGAAAAGTAGCATCTATGTGATATCCAAAAGATAAAATTAAAAGCCAATCAATg < 2:2664033/91‑1 (MQ=255) aaaTCAATGTGACGAAATAATAGATTTAGAACAGTATAGAAAAGTAGCATCTATGTGATATCCAAAAGATAAAATTAAAAGCCAATCAATg < 2:3849045/91‑1 (MQ=255) aatcgtattaaatattattatattgctttttttcagtttgccgttgttactttcataacttagtaacacagtaTAAAAGCCAATCAATggg > 1:388535‑M1/74‑91 (MQ=255) aTCAATGTGACGAAATAATAGATTTAGAACAGTATAGAAAAGTAGCATCTATGTGATATCCAAAAGATAAAATTAAAAGCCAATCAATggg < 1:1725638/91‑1 (MQ=255) aTCAATGTGACGAAATAATAGATTTAGAACAGTATAGAAAAGTAGCATCTATGTGATATCCAAAAGATAAAATTAAAAGCCAATCAATggg > 1:1791385/1‑91 (MQ=255) aTCAATGTGACGAAATAATAGATTTAGAACAGTATAGAAAAGTAGCATCTATGTGATATCCAAAAGATAAAATTAAAAGCCAATCAATggg < 2:3179946/91‑1 (MQ=255) tCAATGTGACGAAATAATAGATTTAGAACAGTATAGAAAAGTAGCATCTATGTGATATCCAAAAGATAAAATTAAAAGCCAATCAATGGGa < 1:2926128/91‑1 (MQ=255) tCAATGTGACGAAATAATAGATTTAGAACAGTATAGAAAAGTAGCATCTATGTGATATCCAAAAGATAAAATTAAAAGCCAATCAATGGGa < 1:2506140/91‑1 (MQ=255) tCAATGTGACGAAATAATAGATTTAGAACAGTATAGAAAAGTAGCATCTATGTGATATCCAAAAGATAAAATTAAAAGCCAATCAATGGGa > 2:766421/1‑91 (MQ=255) aaTGTGACGAAATAATAGATTTAGAACAGTATAGAAAAGTAGCATCTATGTGATATCCAAAAGATAAAATTAAAAGCCAATCAATGGGaaa < 1:3421398/91‑1 (MQ=255) aTGTGACGAAATAATAGATTTAGAACAGTATAGAAAAGTAGCATCTATGTGATATCCAAAAGATAAAATTAAAAGCCAATCAATGGGAAAt < 1:771179/91‑1 (MQ=255) tgtgACGAAATAATAGATTTAGAACAGTATAGAAAAGTAGCATCTATGTGATATCCAAAAGATAAAATTAAAAGCCAATCAATGGGAAATg > 1:3657166/1‑91 (MQ=255) tgtgACGAAATAATAGATTTAGAACAGTATAGAAAAGTAGCATCTATGTGATATCCAAAAGATAAAATTAAAAGCCAATCAATGGGAAATg > 2:1251184/1‑91 (MQ=255) tgtgACGAAATAATAGATTTAGAACAGTATAGAAAAGTAGCATCTATGTGATATCCAAAAGATAAAATTAAAAGCCAATCAATGGGAAATg < 1:3354588/91‑1 (MQ=255) gtgACGAAATAATAGATTTAGAACAGTATAGAAAAGTAGCATCTATGTGATATCCAAAAGATAAAATTAAAAGCCAATCAATGGGAAATGt > 2:1611189/1‑91 (MQ=255) gtgACGAAATAATAGATTTAGAACAGTATAGAAAAGTAGCATCTATGTGATATCCAAAAGATAAAATTAAAAGCCAATCAATGGGAAATGt > 2:1645087/1‑91 (MQ=255) gtgACGAAATAATAGATTTAGAACAGTATAGAAAAGTAGCATCTATGTGATATCCAAAAGATAAAATTAAAAGCCAATCAATGGGAAATGt < 2:1718200/91‑1 (MQ=255) gtgACGAAATAATAGATTTAGAACAGTATAGAAAAGTAGCATCTATGTGATATCCAAAAGATAAAATTAAAAGCCAATCAATGGGAAATGt < 2:1018276/91‑1 (MQ=255) gtgACGAAATAATAGATTTAGAACAGTATAGAAAAGTAGCATCTATGTGATATCCAAAAGATAAAATTAAAAGCCAATCAATGGGAAATGt > 2:1861582/1‑91 (MQ=255) gtgACGAAATAATAGATTTAGAACAGTATAGAAAAGTAGCATCTATGTGATATCCAAAAGATAAAATTAAAAGCCAATCAATGGGAAATGt > 2:239511/1‑91 (MQ=255) gtgACGAAATAATAGATTTAGAACAGTATAGAAAAGTAGCATCTATGTGATATCCAAAAGATAAAATTAAAAGCCAATCAATGGGAAATGt > 2:3508639/1‑91 (MQ=255) aCGAAATAATAGATTTAGAACAGTATAGAAAAGTAGCATCTATGTGATATCCAAAAGATAAAATTAAAAGCCAATCAATGGGAAATGTTGa > 1:3064503/1‑91 (MQ=255) aCGAAATAATAGATTTAGAACAGTATAGAAAAGTAGCATCTATGTGATATCCAAAAGATAAAATTAAAAGCCAATCAATGGGAAATGTTGa > 1:1356069/1‑91 (MQ=255) aaaTAATAGATTTAGAACAGTATAGAAAAGTAGCATCTATGTGATATCCAAAAGATAAAATTAAAAGCCAATCAATGGGAAATGTTGACtt < 2:3272949/91‑1 (MQ=255) aaaTAATAGATTTAGAACAGTATAGAAAAGTAGCATCTATGTGATATCCAAAAGATAAAATTAAAAGCCAATCAATGGGAAATGTTGACtt > 2:683673/1‑91 (MQ=255) ataataGATTTAGAACAGTATAGAAAAGTAGCATCTATGTGATATCCAAAAGATAAAATTAAAAGCCAATCAATGGGAAATGTTGACTTCa < 2:3699174/91‑1 (MQ=255) aataGATTTAGAACAGTATAGAAAAGTAGCATCTATGTGATATCCAAAAGATAAAATTAAAAGCCAATCAATGGGAAATGTTGACTTCAac < 2:2870485/91‑1 (MQ=255) aataGATTTAGAACAGTATAGAAAAGTAGCATCTATGTGATATCCAAAAGATAAAATTAAAAGCCAATCAATGGGAAATGTTGACTTCAac < 2:1520748/91‑1 (MQ=255) ataGATTTAGAACAGTATAGAAAAGTAGCATCTATGTGATATCCAAAAGATAAAATTAAAAGCCAATCAATGGGAAATGTTGACTTCAaca > 1:2235074/1‑91 (MQ=255) taGATTTAGAACAGTATAGAAAAGTAGCATCTATGTGATATCCAAAAGATAAAATTAAAAGCCAATCAATGGGAAATGTTGACTTCAacac < 1:1478352/91‑1 (MQ=255) atattgctttttttcagtttgccgttgttactttcataacttagtaacacagtaTAAAAGCCAATCAATGGGAAATGTTGACTTCAACACt > 1:3507083‑M1/55‑91 (MQ=255) tattgctttttttcagtttgccgttgttactttcataacttagtaacacagtaTAAAAGCCAATCAAACGGAA‑TGTTGACTTCAACACTcc > 1:2772893‑M1/54‑91 (MQ=255) gATTTAGAACAGTATAGAAAAGTAGCATCTATGTGATATCCAAAAGATAAAATTAAAAGCCAATCAATGGGAAATGTTGACTTCAACACTc > 1:2342362/1‑91 (MQ=255) tttAGAACAGTATAGAAAAGTAGCATCTATGTGATATCCAAAAGATAAAATTAAAAGCCAATCAATGGGAAATGTTGACTTCAACACTCCg > 2:3474896/1‑91 (MQ=255) tttAGAACAGTATAGAAAAGTAGCATCTATGTGATATCCAAAAGATAAAATTAAAAGCCAATCAATGGGAAATGTTGACTTCAACACTCCg < 2:3389583/91‑1 (MQ=255) ttAGAACAGTATAGAAAAGTAGCATCTATGTGATATCCAAAAGATAAAATTAAAAGCCAATCAATGGGAAATGTTGACTTCAACACTCCGt < 1:754226/91‑1 (MQ=255) aGAACAGTATAGAAAAGTAGCATCTATGTGATATCCAAAAGATAAAATTAAAAGCCAATCAATGGGAAATGTTGACTTCAACACTCCGttt < 2:564303/91‑1 (MQ=255) aGAACAGTATAGAAAAGTAGCATCTATGTGATATCCAAAAGATAAAATTAAAAGCCAATCAATGGGAAATGTTGACTTCAACACTCCGttt < 2:60267/91‑1 (MQ=255) tttttttcagtttgccgttgttactttcataacttagtaacacagtaTAAAAGCCAATCAATGGGAAATGTTGACTTCAACACTCCGTTTg > 2:2602250‑M1/48‑91 (MQ=255) tttttttcagtttgccgttgttactttcataacttagtaacacagtaTAAAAGCCAATCAATGGGAAATGTTGACTTCAACACTCCGTTTg > 1:656153‑M1/48‑91 (MQ=255) gAACAGTATAGAAAAGTAGCATCTATGTGATATCCAAAAGATAAAATTAAAAGCCAATCAATGGGAAATGTTGACTTCAACACTCCGTTTg < 1:2403319/91‑1 (MQ=255) tttttcagtttgccgttgttactttcataacttagtaacacagtaTAAAAGCCAATCAATGGGAAATGTTGACTTCAACACTCCGTTTGAt > 2:728339‑M1/46‑91 (MQ=255) ttcagtttgccgttgttactttcataacttagtaacacagtaTAAAAGCCAATCAATGGGAAATGTTGACTTCAACACTCCGTTTGATTgg > 2:1417811‑M1/43‑91 (MQ=255) tcagtttgccgttgttactttcataacttagtaacacagtaTAAAAGCCAATCAATGGGAAATGTTGACTTCAACACTCCGTTTGATTGGc > 2:3116193‑M1/42‑91 (MQ=255) tcagtttgccgttgttactttcataacttagtaacacagtaTAAAAGCCAATCAATGGGAAATGTTGACTTCAACACTCCGTTTGATTGGc > 1:598684‑M1/42‑91 (MQ=255) tataGAAAAGTAGCATCTATGTGATATCCAAAAGATAAAATTAAAAGCCAATCAATGGGAAATGTTGACTTCAACACTCCGTTTGATTGGc < 1:3236462/91‑1 (MQ=255) ataGAAAAGTAGCATCTATGTGATATCCAAAAGATAAAATTAAAAGCCAATCAATGGGAAATGTTGACTTCAACACTCCGTTTGATTGGCt < 1:976411/91‑1 (MQ=255) taGAAAAGTAGCATCTATGTGATATCCAAAAGATAAAATTAAAAGCCAATCAATGGGAAATGTTGACTTCAACACTCCGTTTGATTGGCtt < 1:3464134/91‑1 (MQ=255) aGAAAAGTAGCATCTATGTGATATCCAAAAGATAAAATTAAAAGCCAATCAATGGGAAATGTTGACTTCAACACTCCGTTTGATTGGCttt > 1:1294213/1‑91 (MQ=255) tAGCATCTATGTGATATCCAAAAGATAAAATTAAAAGCCAATCAATGGGAAATGTTGACTTCAACACTCCGTTTGATTGGCTTTTATACtg > 1:3142330/1‑91 (MQ=255) tAGCATCTATGTGATATCCAAAAGATAAAATTAAAAGCCAATCAATGGGAAATGTTGACTTCAACACTCCGTTTGATTGGCTTTTATACtg < 1:2918658/91‑1 (MQ=255) aGCATCTATGTGATATCCAAAAGATAAAATTGAAAGCCAATCAATGGGAAATGTTGACTTCAACACTGCGTTTGATTGGATTTTATACtgt > 2:2962284/1‑91 (MQ=255) gCATCTATGTGATATCCAAAAGATAAAATTAAAAGCCAATCAATGGGAAATGTTGACTTCAACACTCCGTTTGATTGGCTTTTATACtgtg < 2:1349615/91‑1 (MQ=255) cATCTATGTGATATCCAAAAGATAAAATTAAAAGCCAATCAATGGGAAATGTTGACTTCAACACTCCGTTTGATTGGCTTTTATACTgtgt > 2:1483353/1‑91 (MQ=255) aTCTATGTGATATCCAAAAGATAAAATTAAAAGCCAATCAATGGGAAATGTTGACTTCAACACTCCGTTTGATTGGCTTTTATACTGTGtt > 1:2643047/1‑91 (MQ=255) cTATGTGATATCCAAAAGATAAAATTAAAAGCCAATCAATGGGAAATGTTGACTTCAACACTCCGTTTGATTGGCTTTTATACTGTGTTAc > 1:3474177/1‑91 (MQ=255) cTATGTGATATCCAAAAGATAAAATTAAAAGCCAATCAATGGGAAATGTTGACTTCAACACTCCGTTTGATTGGCTTTTATACTGTGTTAc < 2:2742161/91‑1 (MQ=255) aTGTGATATCCAAAAGATAAAATTAAAAGCCAATCAATGGGAAATGTTGACTTCAACACTCCGTTTGATTGGCTTTTATACTGTGTTACTa < 2:2057779/91‑1 (MQ=255) tgtgATATCCAAAAGATAAAATTAAAAGCCAATCAATGGGAAATGTTGACTTCAACACTCCGTTTGATTGGCTTTTATACTGTGTTACTaa > 1:2467352/1‑91 (MQ=255) tgtgATATCCAAAAGATAAAATTAAAAGCCAATCAATGGGAAATGTTGACTTCAACACTCCGTTTGATTGGCTTTTATACTGTGTTACTaa < 2:1175471/91‑1 (MQ=255) gATATCCAAAAGATAAAATTAAAAGCCAATCAATGGGAAATGTTGACTTCAACACTCCGTTTGATTGGCTTTTATACTGTGTTACTAAGtt < 1:2889503/91‑1 (MQ=255) tatCCAAAAGATAAAATTAAAAGCCAATCAATGGGAAATGTTGACTTCAACACTCCGTTTGATTGGCTTTTATACTGTGTTACTAAGTTAt < 1:1127730/91‑1 (MQ=255) tCCAAAAGATAAAATTAAAAGCCAATCAATGGGAAATGTTGACTTCAACACTCCGTTTGATTGGCTTTTATACTGTGTTACTAAGTTATGa < 1:1249791/91‑1 (MQ=255) tCCAAAAGATAAAATTAAAAGCCAATCAATGGGAAATGTTGACTTCAACACTCCGTTTGATTGGCTTTTATACTGTGTTACTAAGTTATGa < 2:1166689/91‑1 (MQ=255) ccAAAAGATAAAATTAAAAGCCAATCAATGGGAAATGTTGACTTCAACACTCCGTTTGATTGGCTTTTATACTGTGTTACTAAGTTATGaa < 2:2132067/91‑1 (MQ=255) aaaGATAAAATTAAAAGCCAATCAATGGGAAATGTTGACTTCAACACTCCGTTTGATTGGCTTTTATACTGTGTTACTAAGTTATGAAAGt < 1:3005626/91‑1 (MQ=255) aGATAAAATTAAAAGCCAATCAATGGGAAATGTTGACTTCAACACTCCGTTTGATTGGCTTTTATACTGTGTTACTAAGTTATGAAAGTaa > 2:2710109/1‑91 (MQ=255) gATAAAATTAAAAGCCAATCAATGGGAAATGTTGACTTCAACACTCCGTTTGATTGGCTTTTATACTGTGTTACTAAGTTATGAAAGTaac < 1:884080/91‑1 (MQ=255) aTAAAATTAAAAGCCAATCAATGGGAAATGTTGACTTCAACACTCCGTTTGATTGGCTTTTATACTGTGTTACTAAGTTATGAAAGTaaca < 1:1644243/91‑1 (MQ=255) aTAAAATTAAAAGCCAATCAATGGGAAATGTTGACTTCAACACTCCGTTTGATTGGCTTTTATACTGTGTTACTAAGTTATGAAAGTaaca > 2:2460051/1‑91 (MQ=255) tAAAATTAAAAGCCAATCAATGGGAAATGTTGACTTCAACACTCCGTTTGATTGGCTTTTATACTGTGTTACTAAGTTATGAAAGTaacaa > 1:2011977/1‑91 (MQ=255) tAAAATTAAAAGCCAATCAATGGGAAATGTTGACTTCAACACTCCGTTTGATTGGCTTTTATACTGTGTTACTAAGTTATGAAAGTaacaa > 1:1916622/1‑91 (MQ=255) aaaaTTAAAAGCCAATCAATGGGAAATGTTGACTTCAACACTCCGTTTGATTGGCTTTTATACTGTGTTACTAAGTTATGAAAGTaacaac > 2:227459/1‑91 (MQ=255) aaaTTAAAAGCCAATCAATGGGAAATGTTGACTTCAACACTCCGTTTGATTGGCTTTTATACTGTGTTACTAAGTTATGAAAGTAACAACg > 2:1123275/1‑91 (MQ=255) aaaTTAAAAGCCAATCAATGGGAAATGTTGACTTCAACACTCCGTTTGATTGGCTTTTATACTGTGTTACTAAGTTATGAAAGTAACAACg > 1:2857107/1‑91 (MQ=255) aaTTAAAAGCCAATCAATGGGAAATGTTGACTTCAACACTCCGTTTGATTGGCTTTTATACTGTGTTACTAAGTTATGAAAGTAACAACgg < 2:3744983/91‑1 (MQ=255) aaTTAAAAGCCAATCAATGGGAAATGTTGACTTCAACACTCCGTTTGATTGGCTTTTATACTGTGTTACTAAGTTATGAAAGTAACAACgg < 1:2098355/91‑1 (MQ=255) aTTAAAAGCCAATCAATGGGAAATGTTGACTTCAACACTCCGTTTGATTGGCTTTTATACTGTGTTACTAAGTTATGAAAGTAACAACGGc < 2:1214520/91‑1 (MQ=255) ttAAAAGCCAATCAATGGGAAATGTTGACTTCAACACTCCGTTTGATTGGCTTTTATACTGTGTTACTAAGTTATGAAAGTAACAACGGCa > 1:1757959/1‑91 (MQ=255) TAAAAGCCAATCAATGGGAAATGTTGACTTCAACACTCCGTTTGATTGGCTTTTATACTGTGTTACTAAGTTATGAAAGTAACAACGGCaa < 2:1142200‑M1/91‑1 (MQ=255) TAAAAGCCAATCAATGGGAAATGTTGACTTCAACACTCCGTTTGATTGGCTTTTATACTGTGTTACTAAGTTATGAAAGTAACAACGGCaa > 1:371042‑M1/1‑91 (MQ=255) | TGATATGGCTATTGCAAATCAATGTGACGAAATAATAGATTTAGAACAGTATAGAAAAGTAGCATCTATGTGATATCCAAAAGATAAAATTAAAAGCCAATCAATGGGAAATGTTGACTTCAACACTCCGTTTGATTGGCTTTTATACTGTGTTACTAAGTTATGAAAGTAACAACGGCAA > USA300TCH1516_ALE/1040267‑1040447 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |