| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | 1084754 = | 154 (0.810) | 17 (0.100) | 13/140 | NT | 11.5% | intergenic (+126/+139) | purD/ykoC_1 | Phosphoribosylamine‑‑glycine ligase/Putative HMP/thiamine permease protein YkoC |
| ? | USA300TCH1516_ALE | 1084817 = | 126 (0.760) | intergenic (+189/+76) | purD/ykoC_1 | Phosphoribosylamine‑‑glycine ligase/Putative HMP/thiamine permease protein YkoC | |||||
Only 100 of 286 total aligned reads displayed.
TCTATAACGATAGATTTTTTCATAGCTTTTTTAGTTGTAGAGTCTAGGACATTGATTTCTGTACCAAATTTGTGATTATGCATATGTAATACAAAAGAGGCGCCACAACATGTTTGGATGAACAAAATAACATGTTTGTGGCACCTCTTTTGTTTAGTATGGAATAAATGGTTTTCTTTTT > USA300TCH1516_ALE/1084664‑1084844 | tCTATAACGATAGATTTTTTCATAGCTTTTTTAGTTGTAGAGTCTTGGACATTGATTTCTGTACCAAATTTGTGATTATGCATATGTAATA > 2:3655619‑M1/1‑91 (MQ=255) tcgtgtaggttaaattttatccataattgtatagatactaaattagaaattcattgtatagaaaaagaaaaccatttattccatactaaAc > 1:3123245‑M1/90‑91 (MQ=255) cTATAACGATAGATTTTTTCATAGCTTTTTTAGTTGTAGAGTCTAGGACATTGATTTCTGTACCAAATTTGTGATTATGCATATGTAATAC < 2:3310273‑M1/91‑1 (MQ=255) tataACGATAGATTTTTTCATAGCTTTTTTAGTTGTAGAGTCTAGGACATTGATTTCTGTACCAAATTTGTGATTATGCATATGTAATACA < 1:1477210‑M1/91‑1 (MQ=255) ataACGATAGATTTTTTCATAGCTTTTTTAGTTGTAGAGTCTAGGACATTGATTTCTGTACCAAATTTGTGATTATGCATATGTAATACAA < 2:2749415‑M1/91‑1 (MQ=255) ataACGATAGATTTTTTCATAGCTTTTTTAGTTGTAGAGTCTAGGACATTGATTTCTGTACCAAATTTGTGATTATGCATATGTAATACAA > 2:3249255‑M1/1‑91 (MQ=255) ataACGATAGATTTTTTCATAGCTTTTTTAGTTGTAGAGTCTAGGACATTGATTTCTGTACCAAATTTCTGATTATGCATATGTAATACAA > 2:3130372‑M1/1‑91 (MQ=255) taACGATAGATTTTTTCATAGCTTTTTTAGTTGTAGAGTCTAGGACATTGATTTCTGTACCAAATTTGTGATTATGCATATGTAATACAAA > 1:2445991‑M1/1‑91 (MQ=255) taACGATAGATTTTTTCATAGCTTTTTTAGTTGTAGAGTCTAGGACATTGATTTCTGTACCAAATTTGTGATTATGCATATGTAATACAAA > 1:2224537‑M1/1‑91 (MQ=255) taACGATAGATTTTTTCATAGCTTTTTTAGTTGTAGAGTCTAGGACATTGATTTCTGTACCAAATTTGTGATTATGCATATGTAATACAAA > 2:3086340‑M1/1‑91 (MQ=255) taACGATAGATTTTTTCATAGCTTTTTTAGTTGTAGAGTCTAGGACATTGATTTCTGTACCAAATTTGTGATTATGCATATGTAATACAAA > 1:325116‑M1/1‑91 (MQ=255) aaCGATAGATTTTTTCATAGCTTTTTTAGTTCTAGAGTCTAGGACATTGATTTCTGTACCAAATTTGAGATTATGCATACGTAATACAAAA > 2:2963623‑M1/1‑91 (MQ=255) taggttaaattttatccataattgtatagatactaaattagaaattcattgtatagaaaaagaaaaccatttattccatactaaACAAAag > 2:16287‑M1/85‑91 (MQ=255) aCGATAGATTTTTTCATAGCTTTTTTAGTTGTAGAGTCTAGGACATTGATTTCTGTACCAAATTTGTGATTATGCATATGTAATACAAAAG > 1:612707‑M1/1‑91 (MQ=255) aCGATAGATTTTTTCATAGCTTTTTTAGTTGTAGAGTCTAGGACATTGATTTCTGTACCAAATTTGTGATTATGCATATGTAATACAAAAG > 1:3783494‑M1/1‑91 (MQ=255) aCGATAGATTTTTTCATAGCTTTTTTAGTTGTAGAGTCTAGGACATTGATTTCTGTACCAAATTTGTGATTATGCATATGTAATACAAAAG < 2:520801‑M1/91‑1 (MQ=255) cGATAGATTTTTTCATAGCTTTTTTAGTTGTAGAGTCTAGGACATTGATTTCTGTACCAAATTTGTGATTATGCATATGTAATACAAAAGA > 1:1081225‑M1/1‑91 (MQ=255) ggttaaattttatccataattgtatagatactaaattagaaattcattgtatagaaaaagaaaaccatttattccatactaaACAAAagag < 2:2886627‑M1/9‑1 (MQ=255) ggttaaattttatccataattgtatagatactaaattagaaattcattgtatagaaaaagaaaaccatttattccatactaaACAAAagag < 1:2191111‑M1/9‑1 (MQ=255) gttaaattttatccatcattgtatagttactaaattagaaattcattgtatagaaaaagaaaaccatttattccatactaaACAAAAGAgg < 2:1538100‑M1/10‑1 (MQ=255) gttaaattttatccataattgtatagatactaaattagaaattcattgtatagaaaaagaaaaccatttattccatactaaACAAAAGAgg > 2:3841258‑M1/82‑91 (MQ=255) aTAGATTTTTTCATAGCTTTTTTAGTTGTAGAGTCTAGGACATTGATTTCTGTACCAAATTTGTGATTATGCATATGTAATACAAAAGAGG < 1:2816155‑M1/91‑1 (MQ=255) tAGATTTTTTCATAGCTTTTTTAGTTGTAGAGTCTAGGACATTGATTTCTGTACCAAATTTGTGATTATGCATATGTAATACAAAAGAGgc < 1:1983690/91‑1 (MQ=255) aGATTTTTTCATAGCTTTTTTAGTTGTAGAGTCTAGGACATTGATTTCTGTACCAAATTTGTGATTATGCATATGTAATACAAAAGAGgcg > 1:2716882/1‑91 (MQ=255) aTTTTTTCATAGCTTTTTTAGTTGTAGAGTCTAGGACATTGATTTCTGTACCAAATTTGTGATTATGCATATGTAATACAAAAGAGGCGcc > 1:864784/1‑91 (MQ=255) ttttttCATAGCTTTTTTAGTTGTAGAGTCTAGGACATTGATTTCTGTACCAAATTTGTGATTATGCATATGTAATACAAAAGAGGCGCca > 1:134038/1‑91 (MQ=255) tttttGATAGCTTTTTTAGTTGTAGCGTCTAGGACATTGATTTCTGTACCAAAGTTGTGATTATGCATATGTAATACAAAAGAGGCGCcac < 1:3611563/91‑1 (MQ=255) tttttCATAGCTTTTTTAGTTGTAGAGTCTAGGACATTGATTTCTGTACCAAATTTGTGATTATGCATATGTAATACAAAAGAGGCGCcac < 2:2445991/91‑1 (MQ=255) tttttCATAGCTTTTTTAGTTGTAGAGTCTAGGACATTGATTTCTGTACCAAATTTGTGATTATGCATATGTAATACAAAAGAGGCGCcac > 2:3625441/1‑91 (MQ=255) tttttCATAGCTTTTTTAGTTGTAGAGTCTAGGACATTGATTTCTGTACCAAATTTGTGATTATGCATATGTAATACAAAAGAGGCGCcac < 2:1424380/91‑1 (MQ=255) tttCATAGCTTTTTTAGTTGTAGAGTCTAGGACATTGATTTCTGTACCAAATTTGTGATTATGCATATGTAATACAAAAGAGGCGCCacaa > 2:942411/1‑91 (MQ=255) tttCATAGCTTTTTTAGTTGTAGAGTCTAGGACATTGATTTCTGTACCAAATTTGTGATTATGCATATGTAATACAAAAGAGGCGCCacaa > 2:2351746/1‑91 (MQ=255) tttCATAGCTTTTTTAGTTGTAGAGTCTAGGACATTGATTTCTGTACCAAATTTGTGATTATGCATATGTAATACAAAAGAGGCGCCacaa < 2:177949/91‑1 (MQ=255) ttCATAGCTTTTTTAGTTGTAGAGTCTAGGACATTGATTTCTGTACCAAATTTGTGATTATGCATATGTAATACAAAAGAGGtgccacaaa < 2:3416738‑M1/91‑10 (MQ=255) ttCATAGCTTTTTTAGTTGTAGAGTCTAGGACATTGATTTCTGTACCAAATTTGTGATTATGCATATGTAATACAAAAGAGGCGCCacaac < 2:1547571/91‑1 (MQ=255) tCATAGCTTTTTTAGTTGTAGAGTCTAGGACATTGATTTCTGTACCAAATTTGTGATTATGCATATGTAATACAAAAGAGGCGCCacaaca < 1:341033/91‑1 (MQ=255) cATAGCTTTTTTAGTTGTAGAGTCTAGGACATTGATTTCTGTACCAAATTTGTGATTATGCATATGTAATACAAAAGAGGCGCCACAACAt < 1:3571877/91‑1 (MQ=255) aTAGCTTTTTTAGTTTTAGAGTCTAGGACATTGATTTCTGTACCAAATTTGTGATTATGCATATGTAATACAAAAGAGGCGCCACAACATg > 2:3390151/1‑91 (MQ=255) aGCTTTTTTAGTTGTAGAGTCTAGGACATTGATTTCTGTACCAAATTTGTGATTATGCATATGTAATACAAAAGAGGCGCCACAACATGtt < 2:370971/91‑1 (MQ=255) ttttttAGTTGTAGAGTCTAGGACATTGATTTCTGTACCAAATTTGTGATTATGCATATGTAATACAAAAGAGGCGCCACAACATGTTTgg < 2:3044254/91‑1 (MQ=255) ttttttAGTTGTAGAGTCTAGGACATTGATTTCTGTACCAAATTTGTGATTATGCATATGTAATACAAAAGAGGCGCCACAACATGTTTgg > 2:3326907/1‑91 (MQ=255) tttttAGTTGTAGAGTCTAGGACATTGATTTCTGTACCAAATTTGTGATTATGCATATGTAATACAAAAGAGGCGCCACAACATGTTTGGa < 1:538152/91‑1 (MQ=255) ttttAGTTGTAGAGTCTAGGACATTGATTTCTGTACCAAATTTGTGATTATGCATATGTAATACAAAAGAGGCGCCACAACATGTTTGGAt > 1:126459/1‑91 (MQ=255) tttaaGTTGTAGAGTCTAGGACATTGATTTCTGTACCAAATTTGTGATTATGCATATGTAATACAAAAGAGGCGCCACAACATGTTTGGAt < 2:485363/87‑1 (MQ=255) tttAGTTGTAGAGTCTAGGACATTGATTTCTGTACCAAATTTGTGATTATGCATATGTAATACAAAAGAGGCGCCACAACATGTTTGGATg > 1:1410222/1‑91 (MQ=255) ttAGTTGTAGAGTCTAGGACATTGATTTCTGTACCAAATTTGTGATTATGCATATGTAATACAAAAGAGGCGCCACAACATGTTTGGATGa < 1:1541315/91‑1 (MQ=255) tAGTTGTAGAGTCTAGGACATTGATTTCTGTACCAAATTTGTGATTATGCATATGTAATACAAAAGAGGCGCCACAACATGTTTGGATGaa > 1:2796621/1‑91 (MQ=255) tAGTTGTAGAGTCTAGGACATTGATTTCTGTACCAAATTTGTGATTATGCATATGTAATACAAAAGAGGCGCCACAACATGTTTGGATGaa > 2:545934/1‑91 (MQ=255) tAGAGTCTAGGACATTGATTTCTGTACCAAATTTGTGATTATGCATATGTAATACAAAAGAGGCGCCACAACATGTTTGGATGAACAAAAt < 1:689687/91‑1 (MQ=255) agagTCTAGGACATTGATTTCTGTACCAAATTTGTGATTATGCATATGTAATACAAAAGAGGCGCCACAACACGTTTGGATGAACAAAATa < 2:1939951/91‑1 (MQ=255) gagTCTAGGACATTGATTTCTGTACCAAATTTGTGATTATGCATATGTAATACAAAAGAGGCGCCACAACATGTTTGGATGAACAAAATaa < 2:1029482/91‑1 (MQ=255) gagTCTAGGACATTGATTTCTGTACCAAATTTGTGATTATGCATATGTAATACAAAAGAGGCGCCACAACATGTTTGGATGAACAAAATaa < 1:2094825/91‑1 (MQ=255) gagTCTAGGACATTGATTTCTGTACCAAATTTGTGATTATGCATATGTAATACAAAAGAGGCGCCACAACATGTTTGGATGAACAAAATaa < 2:2126573/91‑1 (MQ=255) gagTCTAGGACATTGATTTCTGTACCAAATTTGTGATTATGCATATGTAATACAAAAGAGGCGCCACAACATGTTTGGATGAACAAAATaa < 1:3760527/91‑1 (MQ=255) gTCTAGGACATTGATTTCTGTACCAAATTTGTGATTATGCATATGTAATACAAAAGAGGcgccacaaacatgttattttgttcatccaaac < 1:338415‑M1/91‑33 (MQ=255) gTCTAGGACATTGATTTCTGTACCAAATTTGTGATTATGCATATGTAATACAAAAGAGGCGCCACAACATGTTTGGATGAACAAAATAACa < 2:2689392/91‑1 (MQ=255) gTCTAGGACATTGATTTCTGTACCAAATTTGTGATTATGCATATGTAATACAAAAGAGGCGCCACAACATGTTTGGATGAACAAAATAACa < 2:1967869/91‑1 (MQ=255) tCTAGGACATTGATTTCTGTACCAAATTTGTGATTATGCATATGTAATACAAAAGAGGCGCCACAACATGTTTGGATGAACAAAATAACAt < 2:3185549/91‑1 (MQ=255) attagaaattcattgtatagaaaaagaaaaccatttattccatactaaACAAAAGAGGTGCCACAACATGTTTGGATGAACAAAATAACAt > 1:737913‑M1/49‑91 (MQ=255) tAGGACATTGATTTCTGTACCAAATTTGTGATTATGCATATGTAATACAAAAGAGGCGCCACAACATGTTTGGATGAACAAAATAACATGt < 2:2154043/91‑1 (MQ=255) agaaattcattgtatagaaaaagaaaaccatttattccatactaaACAAAAGAGGCGCCACAACATGTTTGGATGAACAAAATAACATGtt > 1:1802722‑M1/46‑91 (MQ=255) aGGACATTGATTTCTGTACCAAATTTGTGATTATGCATATGTAATACAAAAGAGGCGCCACAACATGTTTGGATGAACAAAATAACATGtt > 2:3548912/1‑91 (MQ=255) aaattcattgtatagaaaaagaaaaccatttattccatactaaACAAAAGAGGCGCCACAACATGTTTGGATGAACAAAATAACATGTTtg > 1:391859‑M1/44‑91 (MQ=255) aCATTGATTTCTGTACCAAATTTGTGATTATGCATATGTAATACAAAAGAGGCGCCACAACATGTTTGGATGAACAAAATAACATGTTtgt < 1:3286777/91‑1 (MQ=255) aCATTGATTTCTGTACCAAATTTGTGATTATGCATATGTAATACAAAAGAGGCGCCACAACATGTTTGGATGAACAAAATAACATGTTtgt > 1:789610/1‑91 (MQ=255) aTTGATTTCTGTACCAAATTTGTGATTATGCATATGTAATACAAAAGAGGtgccacaaacatgttattttgttcatccaaacatgttgtgg < 1:3465513‑M1/91‑42 (MQ=255) aTTGATTTCTGTACCAAATTTGTGATTATGCATATGTAATACAAAAGAGGCGCCACAACATGTTTGGATGAACAAAATAACATGTTTGTgg < 1:3524580/91‑1 (MQ=255) ttGATTTCTGTACCAAATTTGTGATTATGCATATGTAATACAAAAGAGGtgccacaaacatgttattttgttcatccaaacatgttgtggc < 1:440974‑M1/91‑43 (MQ=255) ttGATTTCTGTACCAAATTTGTGATTATGCATATGTAATACAAAAGAGGCGCCACAACATGTTTGGATGAACAAAATAACATGTTTGTGGc > 2:1395881/1‑91 (MQ=255) gATTTCTGTACCAAATTTGTGATTATGCATATGTAATACAAAAGAGGCGCCACAACATGTTTGGATGAACAAAATAACATGATTGTGGCAc < 2:2005314‑M2/91‑2 (MQ=255) ttgtatagaaaaagaaaaccatttattccatactaaACAAAAGAGGCGCCACAACATGTTTGGATGAACAAAATAACATGTTTGTGGCAcc > 1:2397391‑M1/37‑91 (MQ=255) aTTTCTGTACCAAATTTGTGATTATGCATATGTAATACAAAAGAGGCGCCACAACATGTTTGGATGAACAAAATAACATGTTTGTGGCAcc > 2:3403392‑M2/1‑89 (MQ=255) aTTTCTGTACCAAATTTGTGATTATGCATATGTAATACAAAAGAGGCGCCACAACATGTTTGGATGAACAAAATAACATGTTTGTGGCAcc > 2:827097‑M2/1‑89 (MQ=255) aTTTCTGTACCAAATTTGTGATTATGCATATGTAATACAAAAGAGGCGCCACAACATGTTTGGATGAACAAAATAACATGTTTGTGGCAcc < 1:335199‑M2/91‑3 (MQ=255) aTTTCTGTACCAAATTTGTGATTATGCATATGTAATACAAAAGAGGCGCCACAACATGTTTGGATGAACAAAATAACATGTTTGTGGCAcc > 2:134038‑M2/1‑89 (MQ=255) ttCTGTACCAAATTTGTGATTATGCATATGTAATACAAAAGAGGtgccacaaacatgttattttgttcatccaaacatgttgtggcgcctc < 2:1658482‑M1/91‑48 (MQ=255) gtatagaaaaagaaaaccatttattccatactaaACAAAAGAGGCGCCACAACATGTTTGGATGAACAAAATAACATGTTTGTGGCACctc > 2:1506594‑M1/35‑91 (MQ=255) cTGTACCAAATTTGTGATTATGCATATGTAATACAAAAGAGGtgccacaaacatgttattttgttcatccaaacatgttgtggcgcctctt < 2:3878851‑M1/91‑50 (MQ=255) tGTACCAAATTTGTGATTATGCATATGTAATACAAAAGAGGCGCCACAACATGTTTGGATGAACAAAATAACATGTTTGTGGCAcctcttt < 2:3499210‑M2/91‑8 (MQ=255) tGTACCAAATTTGTGATTATGCATATGTAATACAAAAGAGGCGCCACAACATGTTTGGATGAACAAAATAACATGTTTGTGGCAcctcttt < 1:111357‑M2/91‑8 (MQ=255) tGTACCAAATTTGTGATTATGCATATGTAATACAAAAGAGGCGCCACAACATGTTTGGATGAACAAAATAACATGTTTGTGGCAcctcttt > 1:943092‑M2/1‑84 (MQ=255) tGTACCAAATTTGTGATTATGCATATGTAATACAAAAGAGGCGCCACAACATGTTTGGATGAACAAAATAACATGTTTGTGGCAcctcttt > 1:2286148‑M2/1‑84 (MQ=255) tGTACCAAATTTGTGATTATGCATATGTAATACAAAAGAGGCGCCACAACATGTTTGGATGAACAAAATAACATGTTTGTGGCAcctcttt > 1:941730‑M2/1‑84 (MQ=255) tACCAAATTTGTGATTATGCATATGTAATACAAAAGAGGCGCCACAACATGTTTGGATGAACAAAATAACATGTTTGTGGCAcctcttttg < 1:1599373‑M2/91‑10 (MQ=255) tACCAAATTTGTGATTATGCATATGTAATACAAAAGAGGCGCCACAACATGTTTGGATGAACAAAATAACATGTTTGTGGCAcctcttttg > 2:675065‑M2/1‑82 (MQ=255) tACCAAATTTGTGATTATGCATATGTAATACAAAAGAGGCGCCACAACATGTTTGGATGAACAAAATAACATGTTTGTGGCAcctcttttg < 1:2618009‑M2/91‑10 (MQ=255) ccAAATTTGTGATTATGCATATGTAATACAAAAGAGGCGCCACAACATGTTTGGATGAACAAAATAACATGTTTGTGGCACCTCTTTTGtt > 1:2687982/1‑91 (MQ=255) aaTTTGTGATTAAGCATATGTAATACAAAAGAGGCGCCACAACATGTTTGGATGAACAAAATAACATGTTTGTGGCACCTCTTTTGTTTAg > 1:2977590/1‑91 (MQ=255) aTTTGTGATTATGCATATGTAATACAAAAGAGGCGCCACAACATGTTTGGATGAACAAAATAACATGTTTGTGGCACCTCTTTTGTTTAGt < 1:707817/91‑1 (MQ=255) tgATTATGCATATGTAATACAAAAGAGGCGCCACAACATGTTTGGATGAACAAAATAACATGTTTGTGGCACCTCTTTTGTTTAGTATGGa < 1:1896379/91‑1 (MQ=255) atatGTAATACAAAAGAGGCGCCACAACATGTTTGGATGAACAAAATAACATGTTTGTGGCACCTCTTTTGTTTAGTATGGAATAAATGGt < 2:1131682/91‑1 (MQ=255) atatGTAATACAAAAGAGGCGCCACAACATGTTTGGATGAACAAAATAACATGTTTGTGGCACCTCTTTTGTTTAGTATGGAATAAATGGt < 2:3783494/91‑1 (MQ=255) atatGTAATACAAAAGAGGCGCCACAACACGTTTGGATGAACAAAATAACATGTTTGTGGCACCTCTTTTGTTTAGTATGGAATAAATGGt < 2:2616606/91‑1 (MQ=255) atGTAATACAAAAGAGGCGCCACAACATGTTTGGATGAACAAAATAACATGTTTGTGGCACCTCTTTTGTTTAGTATGGAATAAATGGttt > 1:103019/1‑91 (MQ=255) gTAATACAAAAGAGGCGCCACAACATGTTTGGATGAACAAAATAACATGTTTGTGGCACCTCTTTTGTTTAGTATGGAATAAATGGttttc < 2:1193829/91‑1 (MQ=255) tACAAAAGAGGCGCCACAACATGTTTGGATGAACAAAATAACATGTTTGTGGCACCTCTTTTGTTTAGTATGGAATAAATGGttttctttt > 2:3695360/1‑91 (MQ=255) tACAAAAGAGGCGCCACAACATGTTTGGATGAACAAAATAACATGTTTGTGGCACCTCTTTTGTTTAGTATGGAATAAATGGttttctttt < 1:3635262/91‑1 (MQ=255) aCAAAAGAGGtgccacaaacatgttattttgttcatccaaacatgttgtggcgcctcttttgtattacatatgcataatcacaaatttggt < 2:27374‑M1/91‑82 (MQ=255) aCAAAAGAGGtgccacaaacatgttattttgttcatccaaacatgttgtggcgcctcttttgtattacatatgcataatcacaaatttggt < 2:25473‑M1/91‑82 (MQ=255) aCAAAAGAGGtgccacaaacatgttattttgttcatccaaacatattgtggcgcctcttttgtattacatatgcataatcacaaatttggt < 1:3089930‑M1/91‑82 (MQ=255) | TCTATAACGATAGATTTTTTCATAGCTTTTTTAGTTGTAGAGTCTAGGACATTGATTTCTGTACCAAATTTGTGATTATGCATATGTAATACAAAAGAGGCGCCACAACATGTTTGGATGAACAAAATAACATGTTTGTGGCACCTCTTTTGTTTAGTATGGAATAAATGGTTTTCTTTTT > USA300TCH1516_ALE/1084664‑1084844 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |