| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | = 1119604 | 153 (0.800) | 34 (0.210) | 16/136 | NT | 19.9% | intergenic (+23/+286) | typA/USA300HOU_RS05545 | GTP‑binding protein TypA/BipA/hypothetical protein |
| ? | USA300TCH1516_ALE | = 1119622 | 144 (0.890) | intergenic (+41/+268) | typA/USA300HOU_RS05545 | GTP‑binding protein TypA/BipA/hypothetical protein | |||||
Only 100 of 356 total aligned reads displayed.
TTTTAAACAAAAATGTTCGTGAAAAAGAAGCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATATTTGAAAAAGTGTTTAAATGCTATTATTTCCTGTTACTTTCACATTTTC > USA300TCH1516_ALE/1119514‑1119694 | ttttAAACAAAAATGTTCGTGAAAAAGAAGCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCT > 2:556450‑M1/1‑91 (MQ=255)ttttAAACAAAAATGTTCGTGAAAAAGAAGCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCT > 1:1932051‑M1/1‑91 (MQ=255) tttAAACAAAAATGTTCGTGAAAAAGAAGCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTg > 1:816701/1‑91 (MQ=255) ttAAACAAAAATGTTCGTGAAAAAGAAGCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGa < 1:321036/91‑1 (MQ=255) tAAACAAAAATGTTCGTGAAAAAGAAGCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAg < 1:1126713/91‑1 (MQ=255) aaaCAAAAATGTTCGTGAAAAAGAAGCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGc < 1:1277020/91‑1 (MQ=255) aaCAAAAATGTTCGTGAAAAAGAAGCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCg < 1:663512/91‑1 (MQ=255) aaCAAAAATGTTCGTGAAAAAGAAGCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCg > 2:2764302/1‑91 (MQ=255) cAAAAATGTTCGTGAAAAAGAAGCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGAt > 2:3592462/1‑91 (MQ=255) aaaaTGTTCGTGAAAAAGAAGCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGa > 1:3667812/1‑91 (MQ=255) aTGTTCGTGAAAAAGAAGCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTaagcaactttca < 2:2409989‑M1/91‑13 (MQ=255) tGTTCGTGAAAAAGAAGCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGt > 2:3460409/1‑91 (MQ=255) ttCGTGAAAAAGAAGCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTaagcaactttcatcg < 1:3856369‑M1/91‑16 (MQ=255) tCGTGAAAAAGAAGCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGc < 2:43354/91‑1 (MQ=255) ttgaaaatgtgaaagtaacaggaaataatagcatttaaacactttttcaaatattatatgccAAAAGAGAAGCTGAGCGATGAAAGTTGCt > 2:1254235‑M1/63‑91 (MQ=255) gTGAAAAAGAAGCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTaagcaactttcatcgctc < 1:2687174‑M1/91‑19 (MQ=255) tGAAAAAGAAGCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAAATTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTa < 2:3413380‑M2/91‑2 (MQ=255) aaaatgtgaaagtaacaggaaataatagcatttaaacactttttcaaatattatatgccAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAg > 2:857478‑M1/60‑91 (MQ=255) aaatgtgaaagtaacaggaaataatagcatttaaacactttttcaaatattatatgccAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGc > 1:1871056‑M1/59‑91 (MQ=255) aaaaaGAAGCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTaagcaactttcatcgctcagc < 1:1065521‑M1/91‑22 (MQ=255) aatgtgaaagtaacaggaaataatagcatttaaacactttttcaaatattatatgccAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCt > 1:2611918‑M1/58‑91 (MQ=255) aatgtgaaagtaacaggaaataatagcatttaaacacttttgcaaatattatatgccAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCt > 2:1474928‑M1/58‑91 (MQ=255) aaaaGAAGCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTagct > 2:943350‑M2/1‑87 (MQ=255) aaaaGAAGCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTagct > 1:2444351‑M2/1‑87 (MQ=255) aaaGAAGCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTagctt > 1:769117‑M2/1‑86 (MQ=255) aaaGAAGCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTagctt > 1:3578339‑M2/1‑86 (MQ=255) aagaagCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTagcttc > 1:2047624‑M2/1‑85 (MQ=255) aagCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTagcttccct < 2:1632296‑M2/91‑10 (MQ=255) agCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTaagcaactttcatcgctc < 1:3716368‑M1/81‑19 (MQ=255) gCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTagcttctcttt > 2:754188‑M2/1‑80 (MQ=255) cAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTagcttctctttt < 2:3025748‑M2/91‑13 (MQ=255) aaGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTgg < 2:2933171/91‑1 (MQ=255) aGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGc > 2:706928/1‑91 (MQ=255) cGTGTCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCat < 1:3132066/91‑1 (MQ=255) cGTATCAAACAAATGATGCAAGAGAACGAATAATTTAACATAATAAATGAGAAGGTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCat < 2:1121717/91‑1 (MQ=255) cGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCat < 1:2102507/91‑1 (MQ=255) aaacaaaTGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATataata < 2:1664638/91‑1 (MQ=255) aaacaaaTGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATataata > 2:3267464/1‑91 (MQ=255) aaacaaaTGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATaaaaaa < 2:1216578/91‑3 (MQ=255) aaaTGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATATTTg > 2:161920/1‑91 (MQ=255) aaTGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATATTTGa < 1:3214999/91‑1 (MQ=255) aaTGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATATTTGa < 2:1434464/91‑1 (MQ=255) aaTGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATATTTGa > 1:3259700/1‑91 (MQ=255) aaTGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATATATGa < 2:2065579/91‑1 (MQ=255) gatgCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAATTTGCTTAGCTTCTCTTTTGGCATATAATATTTGaaaa < 1:3274245/91‑1 (MQ=255) atgCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATATTTGaaaaa > 1:3560343/1‑91 (MQ=255) atgCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATATTTGaaaaa < 1:3404392/91‑1 (MQ=255) tgCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATATTTGAAAAAg > 2:2845308/1‑91 (MQ=255) gCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATATTTGAAAAAgt < 2:3281977/91‑1 (MQ=255) aaGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATATTTGAAAAAgtgt > 2:3175962/1‑91 (MQ=255) aGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATATTTGAAAAAGTGtt < 2:1835730/91‑1 (MQ=255) gAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATATTTGAAAAAGTGttt < 1:556450/91‑1 (MQ=255) gAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATATTTGAAAAAGTGTTTAAATGc < 1:430695/91‑1 (MQ=255) gAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAAAAAAAAAAAAAGTGTTTAAATGc < 2:2552711/91‑1 (MQ=255) aataatTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATATTTGAAAAAGTGTTTAAATGCt > 2:1372025/1‑91 (MQ=255) ataatTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATATTTGAAAAAGTGTTTAAATGCta < 1:161920/91‑1 (MQ=255) aatTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATATTTGAAAAAGTGTTTAAATGCtatt < 1:3337286/91‑1 (MQ=255) aatTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATATTTGAAAAAGTGTTTAAATGCtatt < 1:2281139/91‑1 (MQ=255) atTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATATTTGAAAAAGTGTTTAAATGCtatta > 2:3021478/1‑91 (MQ=255) tAACATAATAAAAGATAAGCTGAGCGGTGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATATTTGAAAAAGTGTTTAAATGCTATTAttt < 2:3359484/91‑1 (MQ=255) aaCATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTagcttctcttttattatgttaaattattcgttttcttgcatcatttgtttgat < 1:501918‑M2/91‑54 (MQ=255) aaCATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATATTTGAAAAAGTGTTTAAATGCTATTATTTc > 1:701897/1‑91 (MQ=255) aCATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATATTTGAAAAAGTGTTTAAATGCTATTATTTcc > 1:3023632/1‑91 (MQ=255) aCATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATATTTGAAAAAGTGTTTAAATGCTATTATTTcc < 2:3727601/91‑1 (MQ=255) aCATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATATTTGAAAAAGTGTTTAAATGCTATTATTTcc < 1:1458004/91‑1 (MQ=255) cATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATATTTGAAAAAGTGTTTAAATGCTATTATTTCCt < 1:1196180/91‑1 (MQ=255) cATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATATTTGAAAAAGTGTTTAAATGCTATTATTTCCt > 1:273017/1‑91 (MQ=255) taataaAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATATTTGAAAAAGTGTTTAAATGCTATTATTTCCTGt < 1:1350352/91‑1 (MQ=255) aaaaGAGAAGCTaagcaactttcatcgctcagcttctcttttattatgttaaattattcgttttcttgcatcatttgtttgatacgctttg < 2:1966127‑M1/91‑80 (MQ=255) aaaaGAGAAGCTaagcaactttcatcgctcagcttctcttttattatgttaaattattcgttttcttgcatcatttgtttgatacgctttg < 2:1011595‑M1/91‑80 (MQ=255) AAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATATTTGAAAAAGTGTTTAAATGCTATTATTTCCTGTTACt < 1:611321‑M1/91‑1 (MQ=255) aaaGAGAAGCTaagcaactttcatcgctcagcttctcttttattatgttaaattattcgttttcttgcatcatttgtttgatacgctttgc < 1:2953789‑M1/91‑81 (MQ=255) aaaGAGAAGCTaagcaactttcatcgctcagcttctcttttattatgttaaattattcgttttcttgcatcatttgtttgatacgctttgc > 2:754151‑M1/1‑11 (MQ=255) AAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATATTTGAAAAAGTGTTTAAATGCTATTATTTCCTGTTACtt > 1:962947‑M1/1‑91 (MQ=255) AAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATATTTGAAAAAGTGTTTAAATGCTATTATTTCCTGTTACttt > 2:2223504‑M1/1‑91 (MQ=255) AAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATATTTGAAAAAGTGTTTAAATGCTATTATTTCCTGTTACttt > 1:792949‑M1/1‑91 (MQ=255) AAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATATTTGAAAAAGTGTTTAAATGCTATTATTTCCTGTTACttt > 1:3832864‑M1/1‑91 (MQ=255) AAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAAAAAAAGAAAAAGTGTTTAAATGCTATTATTTCCTGTTACttt > 2:1082169‑M1/1‑91 (MQ=255) AGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATATTTGAAAAAGTGTTTAAATGCTATTATTTCCTGTTACTTTc < 1:900977‑M1/91‑1 (MQ=255) gagaAGCTaagcaactttcatcgctcagcttctcttttattatgttaaattattcgttttcttgcatcatttgtttgatacgctttgcttc > 1:2024008‑M1/1‑8 (MQ=255) gagaAGCTaagcaactttcatcgctcagcttctcttttattatgttaaattattcgttttcttgcatcatttgtttgatacgctttgcttc > 2:3799396‑M1/1‑8 (MQ=255) gagaAGCTGAGCGATGAAAGTTGCTTagcttctcttttattatgttaaattattcgttttcttgcatcatttgtttgatacgctttgcttc < 2:3331326‑M2/91‑66 (MQ=255) gagaAGCCGAGCGATGAAAGTTGGTTagcttctcttttattatgttaaattattggctttcttgcatccgttgtttgttacgccttgcttt < 2:3832087‑M2/91‑66 (MQ=255) AGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATATTTGAAAAAGTGTTTAAATGCTATTATTTCCTGTTACTTTcac < 1:2558215‑M1/91‑1 (MQ=255) GAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATATTTGAAAAAGTGTTTAAATGCTATTATTTCCTGTTACTTTcaca < 2:2021635‑M1/91‑1 (MQ=255) AAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATATTTGAAAAAGTGTTTAAATGCTATTATTTCCTGTTACTTTCACAt < 1:1697683‑M1/91‑1 (MQ=255) aGCTaagcaactttcatcgctcagcttctcttttattatgttaaattattcgttttcttgcatcatttgtttgatacgctttgcttctttt > 1:2228135‑M1/1‑4 (MQ=255) aGCTaagcaactttcatcgctcagcttctcttttattatgttaaattattcgttttcttgcatcatttgtttgatacgctttgcttctttt > 2:737621‑M1/1‑4 (MQ=255) gCTaagcaactttcatcgctcagcttctcttttattatgttaaattattcgttttcttgcatcatttgtttgatacgctttgcttcttttt < 2:680173‑M1/91‑89 (MQ=255) gCTaagcaactttcatcgctcagcttctcttttattatgttaaattattcgttttcttgcatcatttgtttgatacgctttgcttcttttt < 1:332142‑M1/91‑89 (MQ=255) gCTGAGCGATGAAAGTTGCTTagcttctcttttattatgttaaattattcgttttcttgcatcatttgtttgacacgctttgcttcttttt < 1:1065820‑M2/91‑71 (MQ=255) GCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATATTTGAAAAAGTGTTTAAATGCTATTATTTCCTGTTACTTTCACAttt > 2:816701‑M1/1‑91 (MQ=255) cTGAGCGATGAAAGTTGCTTagcttctcttttattatgttaaattattcgttttcttgcatcatttgtttgatacgctttgcttctttttc < 1:2086643‑M2/91‑72 (MQ=255) cTGAGCGATGAAAGTTGCTTagcttctcctttattatgttaaattattcgttttcttgcatcatttgtctgatacgctttgcttctttttc < 1:3434710‑M2/91‑72 (MQ=255) taagcaactttcatcgctcagcttctcttttattatgttaaattattcgttttcttgcatcatttgtttgatacgctttgcttctttttca > 2:1627994‑M1/1‑1 (MQ=255) tGAGCGATGAAAGTTGCTTagcttctcttttattatgttaaattattcgttttcttgcatcatttgtttgatacgctttgcttctttttca < 1:343369‑M2/91‑73 (MQ=255) TGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATATTTGAAAACGTGTTTAAATGCTATTATTTCCTGTTACTTTCACATTTTc < 2:2703818‑M1/91‑1 (MQ=255) TGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATATTTGAAAAAGTGTTTAAATGCTATTATTTCCTGTTACTTTCACattttt < 2:3853013‑M1/91‑2 (MQ=255) TGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATATTTGAAAAAGTGTTTAAATGCTATTATTTCCTGTTACTTTCACATTTTc > 2:2605007‑M1/1‑91 (MQ=255) TGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATATTTGAAAAAGTGTTTAAATGCTATTATTTCCTGTTACTTTCACATTTTc < 2:2655247‑M1/91‑1 (MQ=255) | TTTTAAACAAAAATGTTCGTGAAAAAGAAGCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATATTTGAAAAAGTGTTTAAATGCTATTATTTCCTGTTACTTTCACATTTTC > USA300TCH1516_ALE/1119514‑1119694 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |