| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | = 1242672 | 149 (0.780) | 13 (0.080) | 8/138 | NT | 8.5% | coding (110/987 nt) | plsX | Phosphate acyltransferase |
| ? | USA300TCH1516_ALE | = 1242683 | 151 (0.920) | coding (121/987 nt) | plsX | Phosphate acyltransferase | |||||
Only 100 of 267 total aligned reads displayed.
ATATGATGGGTGGCGACAATGCGCCTGATATCGTATTAGAAGCCGTACAAAAGGCTGTTGAAGACTTTAAAGATCTAGAAATTATACTTTTCGGTGACGAAAAAAAGTATAATCTGAACCATGAACGAATCGAATTTAGACATTGTTCTGAAAAGATTGAAATGGAAGATGAGCCTGTTAG > USA300TCH1516_ALE/1242582‑1242762 | tatGATGGGTGGCGACAATGCGCCTGATATCGTATTAGAAGCCGTACAAAAGGCTGTTGAAGACTTTAAAGATCTAGAAATTATACTTTTa > 1:3345704‑M1/1‑90 (MQ=255) atgatgGGTGGCGACAATGCGCCTGATATCGTATTAGAAGCCGTACAAAAGGCTGTTGAAGACTTTAAAGATCTAGAAATTATACTTTTCg > 1:1754881/1‑91 (MQ=255) tgatgGGTGGCGACAATGCGCCTGATATCGTATTAGAAGCCGTACAAAAGGCTGTTGAAGACTTTAAAGATCTAGAAATTATACTTTTCgg > 1:2983660/1‑91 (MQ=255) atgGGTGGCGACAATGCGCCTGATATCGTATTAGAAGCCGTACAAAAGGCTGTTGAAGACTTTAAAGATCTAGAAATTATACTTTTCGGTg > 1:1186808/1‑91 (MQ=255) atgGGTGGCGACAATGCGCCTGATATCGTATTAGAAGCCGTACAAAAGGCTGTTGAAGACTTTAAAGATCTAGAAATTATACTTTTCGGTg > 1:3796797/1‑91 (MQ=255) atgGGTGGCGACAATGCGCCTGATATCGTATTAGAAGCCGTACAAAAGGCTGTTGAAGACTTTAAAGATCTAGAAATTATACTTTTCGGTg > 2:2885431/1‑91 (MQ=255) tgGGTGGCGACAATGCGCCTGATATCGTATTAGAAGCCGTACAAAAGGCTGTTGAAGACTTTAAAGATCTAGAAATTATACTTTTCgtcac < 1:2106740/91‑5 (MQ=255) tggTGGCTACAATGCGCCTGATATCGTATTAGAAGCCGTACAAAAGGCTGTTGAAAACTTTAAAGATCTAAAAATTATACTTTTCGGTGAc < 2:1912085/90‑1 (MQ=255) gggTGGCGACAATGCGCCTGATATCGTATTAGAAGCCGTACAAAAGGCTGTTGAAGACTTTAAAGATCTAGAAATTATACTTTTCGGTGAc > 2:3114646/1‑91 (MQ=255) ggTGGCGACAATGCGCCTGATATCGTATTAGAAGCCGTACAAAAGGCTGTTGAAGACTTTAAAGATCTAGAAATTATACTTTTCGGTGACg < 1:3249242/91‑1 (MQ=255) gTGGCGACAATGCGCCTGATATCGTATTAGAAGCCGTACAAAAGGCTGTTGAAGACTTTAAAGATCTAGAAATTATACTTTTCGGTGACGa > 1:2946514/1‑91 (MQ=255) gTGGCGACAATGCGCCTGATATCGTATTAGAAGCCGTACAAAAGGCTGTTGAAGACTTTAAAGATCTAGAAATTATACTTTTCGGTGACGa > 2:1949022/1‑91 (MQ=255) ggCGACAATGCGCCTGATATCGTATTAGAAGCCGTACAAAAGGCTGTTGAAGACTTTAAAGATCTAGAAATTATACTTTTCGGTGACGaca > 1:708992/1‑89 (MQ=255) gCGACAATGCGCCTGATATCGTATTAGAAGCCGTACAAAAGGCTGTTGAAGACTTTAAAGATCTAGAAATTATACTTTTCGGTGACGAAAa > 2:3629378‑M2/1‑90 (MQ=255) cGACAATGCGCCTGATATTGTATTAGAAGCCGTACAAAAGGCTGTTGAAGACTTTAAAGATCTAGAAATTATACTTTTCGGTGACGAAAaa > 1:141768‑M2/1‑89 (MQ=255) cGACAATGCGCCTGATATCGTATTAGAAGCCGTACAAAAGGCTGTTGAAGACTTTAAAGATCTAGAAATTATACTTTTCGGTGACGAAAaa < 2:1879348‑M2/91‑3 (MQ=255) cGACAATGCGCCTGATATCGTATTAGAAGCCGTACAAAAGGCTGTTGAAGACTTTAAAGATCTAGAAATTATACTTTTCGGTGACGAAAaa < 2:1879338‑M2/91‑3 (MQ=255) cGACAATGCGCCTGATATCGTATTAGAAGCCGTACAAAAGGCTGTTGAAGACTTGAAAGATCTAGAAATTATACTTTTCGGTGACGAAAag < 2:3843414‑M2/91‑3 (MQ=255) aacAATGCGCCTGATATCGTATTAGAAGCCGTACAAAAGGCTGTTGAAGACTTTAAAGATCTAGAAATTATACTTTTCAGTAAAAAAAaaa > 2:1652621‑M2/2‑88 (MQ=255) aTGCGCCTGATATCGTATTAGAAGCCGTACAAAAGGCTGTTGAAGACTTTAAAGATCTAGAAATTATACTTTTCGGTGACGAAAaaaagta > 2:2809671‑M2/1‑84 (MQ=255) aTGCGCCTGATATCGTATTAGAAGCCGTACAAAAGGCTGTTGAAGACTTTAAAGATCTAGAAATTATACTTTTCGGTGACGAAAaaaagta < 2:3078730‑M2/91‑8 (MQ=255) tGCGCCTGATATCGTATTAGAAGCCGTACAAAAGGCTGTTGAAGACTTTAAAGATCTAGAAATTATACTTTTtttcgtcaccgaaaagtat < 1:2067503‑M1/91‑20 (MQ=255) tGCGCCTGATATCGTATTAGAAGCCGTACAAAAGGCTGTTGAAGACTTTAAAGATCTAGAAATTATACTTTTCGGTGACGAAAaaaagtat > 2:3818207‑M2/1‑83 (MQ=255) cgcCTGATATCGTATTAGAAGCCGTACAAAAGGCTGTTGAAGACTTTAAAGATCTAGAAATTATACTTTTCGGTGACGAAAaaaagtataa < 2:2537368‑M2/91‑11 (MQ=255) gcCTGATATCGTATTAGAAGCCGTACAAAAGGCTGTTGAAGACTTTAAAGATCTAGAAATTATACTTTTAGGTGAAAAAAaaaagtataat > 2:3033194‑M2/1‑80 (MQ=255) cTGATATCGTATTAGAAGCCGTACAAAAGGCTGTTGAAGACTTTAAAGATCTAGAAATTATACTTTTCGGTGACGAAAAAAAGTATAATCt > 2:1587590/1‑91 (MQ=255) tatCGTATTAGAAGCCGTACAAAAGGCTGTTGAAGACTTTAAAGATCTAGAAATTATACTTTTtttcgtcaccgaaaagtataatttctag < 1:1046066‑M1/91‑29 (MQ=255) atCGTATTAGAAGCCGTACAAAAGGCTGTTGAAGACTTTAAAGATCTAGAAATTATACTTTTCGGTAACGAAAAAAAGTATAATCTGAAcc > 2:3608802/1‑91 (MQ=255) tCGTATTAGAAGTCGTACAAAAGGCTGTTGAAGACTTTAAAGATCTAGAAATTATACTTTTCGGTGACGAAAAAAAGTATAATCTGAACCa > 1:2973550/1‑91 (MQ=255) tCGTATTAGAAGCCGTACAAAAGGCTGTTGAAGACTTTAAATATCTAGAAATTATACTTTTCGGTGACGAAAAAAAGTATAATCTGAACCa > 2:2942609/1‑91 (MQ=255) tCGTATTAGAAGCCGTACAAAAGGCTGTTGAAGACTTTAAAGATCTAGAAATTATACTTTTCGGTGACGAAAAAAAGTATAATCTGAACCa > 2:851296/1‑91 (MQ=255) cGTATTAGAAGCCGTACAAAAGGCTGTTGAAGACTTTAAAGATCTAGAAATTATACTTTTCGGTGACGAAAAAAAGTATAATCTGAACCAt < 2:3873753/91‑1 (MQ=255) gTATTAGAAGCCGTACAAAAGGCTGTTGAAGACTTTAAAGATCTAGAAATTATACTTTTCGGTGACGAAAAAAAGTATAATCTGAACCATg < 2:1002943/91‑1 (MQ=255) ttAGAAGCCGTACAAAAGGCTGTTGAAGACTTTAAAGATCTAGAAATTATACTTTTCGGTGACGAAAAAAAGTATAATCTGAACCATGAAc < 1:2425387/91‑1 (MQ=255) ttAGAAGCCGTACAAAAGGCTGTTGAAGACTATAAAGATCTAGAAATTATACTTTTCGGTGACGAAAAAAAGTATAATCTGAACCATGAAc > 1:3403312/1‑91 (MQ=255) aGAAGCCGTACAAAAGGCTGTTGAAGACTTTAAAGATCTAGAAATTATACTTTTCGGTGACGAAAAAAAGTATAATCTGAACCATGAAcga < 1:2136020/91‑1 (MQ=255) aaGCCGTACAAAAGGCTGTTGAAGACTTTAAAGATCTAGAAATTATACTTTTCGGTGACGAAAAAAAGTATAATCTGAACCATGAAcgaat < 1:2879413/91‑1 (MQ=255) aaGCCGTACAAAAGGCTGTTGAAGACTTTAAAGATCTAGAAATTATACTTTTCGGTGACGAAAAAAAGTATAATCTGAACCATGAAcgaat > 2:10461/1‑91 (MQ=255) aGCCGTACAAAAGGCTGTTGAAGACTTTAAAGATCTAGAAATTATACTTTTCGGTGACGAAAAAAAGTATAATCTGAACCATGAAcgaatc < 2:2736985/91‑1 (MQ=255) ccGTACAAAAGGCTGTTGAAGACTTTAAAGATCTAGAAATTATACTTTTCGGTGACGAAAAAAAGTATAATCTGAACCATGAAcgaatcga > 1:1276697/1‑91 (MQ=255) ccGTACAAAAGGCTGTTGAAGACTTTAAAGATCTAGAAATTATACTTTTCGGTGACGAAAAAAAGTATAATCTGAACCATGAAcgaatcga < 1:2199202/91‑1 (MQ=255) cGTACAAAAGGCTGTTGAAGACTTTAAAGATCTAGAAATTATACTTTTCGGTGACGAAAAAAAGTATAATCTGAACCATGAAcgaatcgaa < 1:1575478/91‑1 (MQ=255) cGTACAAAAGGCTGTTGAAGACTTTAAAGATCTAGAAATTATACTTTTCGGTGACGAAAAAAAGTATAATCTGAACCATGAAcgaatcgaa > 1:1599754/1‑91 (MQ=255) gTACAAAAGGCTGTTGAAGACTTTAAAGATCTAGAAATTATACTTTTCGGTGACGAAAAAAAGTATAATCTGAACCATGAAcgaatcgaat > 1:535393/1‑91 (MQ=255) aCAAAAGGCTGTTGAAGACTTTAAAGATCTAGAAATTATACTTTTCGGTGACGAAAAAAAGTATAATCTGAACCATGAACGAATCGAAttt > 1:136603/1‑91 (MQ=255) cAAAAGGCTGTTGAAGACTTTAAAGATCTAGAAATTATACTTTAAAGAAAAGAAAAAAAGTATAATCTGAACCATGAACGAATCGAATTTa < 2:1682077/91‑1 (MQ=255) aaaaGGCTGTTGAAGACTTTAAAGATCTAGAAATTATACTTTTCGGTGACGAAAAAAAGTATAATCTGAACCATGAACGAATCGAATTTAg < 1:1141902/91‑1 (MQ=255) aGGCTGTTGAAGACTTTAAAGATCTAGAAATTATACTTTTCGGTGACGAAAAAAAGTATAATCTGAACCATGAACGAATCGAATTTAGACa > 1:2576583/1‑91 (MQ=255) gCTGTTGAAGACTTTAAAGATCTAGAAATTATACTTTTCGGTGACGAAAAAAAGTATAATCTGAACCATGAACGAATCGAATTTAGACAtt > 1:473616/1‑91 (MQ=255) gCTGTTGAAGACTTTAAAGATCTAGAAATTATACTTTTCGGTGACGAAAAAAAGTATAATCTGAACCATGAACGAATCGAATTTAGACAtt > 2:2373360/1‑91 (MQ=255) tGTTGAAGACTTTAAAGATCTAGAAATTATACTTTTCGGTGACGAAAAAAAGTATAATCTGAACCATGAACGAATCGAATTTAGACATTGt > 1:3861993/1‑91 (MQ=255) gTTGAAGACTTTAAAGATCTAGAAATTATACTTTTCGGTGACGAAAAAAAGTATAATCTGAACCATGAACGAATCGAATTTAGACATTGtt < 2:222834/91‑1 (MQ=255) ttGAAGACTTTAAAGATCTAGAAATTATACTTTTCGGTGACGAAAAAAAGTATAATCTGAACCATGAACGAATCGAATTTAGACATTGTTc > 2:2156488/1‑91 (MQ=255) ttGAAGACTTTAAAGATCTAGAAATTATACTTTTCGGTGACGAAAAAAAGTATAATCTGAACCATGAACGAATCGAATTTAGACATTGTTc > 2:3555439/1‑91 (MQ=255) tGAAGACTTTAAAGATCTAGAAATTATACTTTTCGGTGACGAAAAAAAGTATAATCTGAACCATGAACGAATCGAATTTAGACATTGTTCt < 2:1372715/91‑1 (MQ=255) gACTTTAAAGATCTAGAAATTATACTTTTAAATAACGAAAAAAAGTATAATCTGAACCATGAACGAATCGAATTTAGACATTGTTCTGaaa < 2:1647242/91‑1 (MQ=255) gACTTTAAAGATATAGAAATTATACTTTTCGGTGACGAAAAAAAGTATAATCTGAACCATGAACGAATCGAATTTAGACATTGTTCTGaaa > 1:3001120/1‑91 (MQ=255) aCTTTAAAGATCTAGAAATTATACTTTTCGGTGACGAAAAAAAGTATAATCTGAACCATGAACGAATCGAATTTAGACATTGTTCTGaaaa > 1:1989076/1‑91 (MQ=255) aCTTTAAAGATCTAGAAATTATACTTTTCGGTGACGAAAAAAAGTATAATCTGAACCATGAACGAATCGAATTTAGACATTGTTCTGaaaa < 1:2744829/91‑1 (MQ=255) aCTTTAAAGATCTAGAAATTATACTTTTCGGTGACGAAAAAAAGTATAATCTGAACCATGAACGAATCGAATTTAGACATTGTTCTGaaaa < 1:3539528/91‑1 (MQ=255) aCTTTAAAGATCTAGAAATTATACTTTTAGGTGAAGAAAAAAAGTATAATCTGAACCATGAACGAATCGAATTTAGACATTGTTCTGaaaa < 2:1754881/91‑1 (MQ=255) cTTTAAAGATCTAGAAATTATACTTTTCGGTGACGAAAAAAAGTATAATCTGAACCATGAACGAATCGAATTTAGACATTGTTCTGAAAAg < 1:1076821/91‑1 (MQ=255) ttAAAGATCTAGAAATTATACTTTTCGGTGACGAAAAAAAGTATAATCTGAACCATGAACGAATCGAATTTAGACATTGTTCTGAAAAGAt < 1:932956/91‑1 (MQ=255) ttAAAGATCTAGAAATTATACTTTTCGGTGACGAAAAAAAGTATAATCTGAACCATGAACGAATCGAATTTAGACATTGTTCTGAAAAGAt > 1:1037343/1‑91 (MQ=255) ctAAAGATCTAGAAATTATACTTTTCGGTGACGAAAAAAAGTATAGTCTGAACCATGAACGAATCGAATTTAGACATTGTTCTGAAAAGAt < 2:3845798/90‑1 (MQ=255) aGATCTAGAAATTATACTTTTCGGTGACGAAAAAAAGTATAATCTGAACCATGAACGAATCGAATTTAGACATTGTTCTGAAAAGATTGaa < 2:1471953/91‑1 (MQ=255) aGATCTAGAAATTATACTTTTCGGTGACGAAAAAAAGTATAATCTGAACCATGAACGAATCGAATTTAGACATTGTTCTGAAAAGATTGaa < 1:844529/91‑1 (MQ=255) aGATCTAGAAATTATACTTTTCGGTGACGAAAAAAAGTATAATCTGAACCATGAACGAATCGAATTTAGACATTGTTCTGAAAAGATTGaa > 1:2655564/1‑91 (MQ=255) aGATCTAGAAATTATACTTTTCGGTGACGAAAAAAAGTATAATCTGAACCATGAACGAATCGAATTTAGACATTGTTCTGAAAAGATTGaa > 1:376013/1‑91 (MQ=255) aGATCTAGAAAATATACTTTTCGGTGACGAAAAAAAGTATAATCTGAACCATGAACGAATCGAATTTAGACATTGTTCTGAAAAGATTGaa < 1:3164494/91‑1 (MQ=255) tCTAGAAATTATACTTTTCGGTGACGAAAaaaagtataattactagatctttaaagtcttcaacagccttttgtacggcttctaatacgat < 1:3361379‑M2/91‑63 (MQ=255) cTAGATATTATACTTTTCGGTGACGAAAAAAAGTATAATCTGAACCATGAACGAATCGAATTTAGACATTGTTCTGAAAAGATTGAAATgg < 2:3584484/91‑1 (MQ=255) cTAGAAATTATACTTTTCGGTGACGAAAAAAAGTATAATCTGAACCATGAACGAATCGAATTTAGACATTGTTCTGAAAAGATTGAAATgg < 2:141553/91‑1 (MQ=255) cTAGAAATTATACTTTTCGGTGACGAAAAAAAGTATAATCTGAACCATGAACGAATCGAATTTAGACATTGTTCTGAAAAGATTGAAATgg > 2:613910/1‑91 (MQ=255) aaTTATACTTTTCGGTGACGAAAaaaagtataatttctagatctttaaagtcttcaacagccttttgtacggcttctaatacgatatcagg < 1:2325886‑M2/91‑69 (MQ=255) aaTTATACTTTTCGGTGACGAAAAAAAGTATAATCTGAACCATGAACGAATCGAATTTAGACATTGTTCTGAAAAGATTGAAATGGAAGAt > 1:864416/1‑91 (MQ=255) aTTATACTTTTtttcgtcaccgaaaagtataatttctagatctttaaagtcttcaacagccttttgtacggcttctaatacgatatcaggt > 2:2824020‑M1/1‑11 (MQ=255) aTTATACTTTTtttcgtcaccgaaaagtataatttctagatctttaaagtcttcaacagccttttgtacggcttctaatacgatatcaggc > 2:1638674‑M1/1‑11 (MQ=255) ttATACTTTTtttcgtcaccgaaaagtataatttctagatctttaaagtcttcaacagccttttgtacggcttctaatacgatatcaggcg < 1:2186386‑M1/91‑82 (MQ=255) ttATACTTTTCGGTGACGAAAAAAAGTATAATCTGAACCATGAACGAATCGAATTTAGACATTGTTCTGAAAAGATTGAAATGGAAGATGa > 1:2366149/1‑91 (MQ=255) ttATACTTTTCGGTGACGAAAAAAAGTATAATCTGAACCATGAACGAATCGAATTTAGACATTGTTCTGAAAAGATTGAAATGGAAGATGa > 2:3671667/1‑91 (MQ=255) tataCTTTTtttcgtcaccgaaaagtataatttctagatctttaaagtcttcaacagccttttgtacggcttctaatacgatatcaggcgc < 2:2569258‑M1/91‑83 (MQ=255) tataCTTTTtttcgtcaccgaaaagtataatttctagatctttaaagtcttcaacagccttttgtacggcttctaatacgatatcaggcgc > 1:1328745‑M1/1‑9 (MQ=255) tataCTTTTCGGTGACGAAAAAAAGTATAATCTGAACCATGAACGAATCGAATTTAGACATTGTTCTGAAAAGATTGAAATGGAAGATGAg > 2:3241773/1‑91 (MQ=255) ataCTTTTtttcgtcaccgaaaagtataatttctagatctttaaagtcttcaacagccttttgtacggcttctaatacgatatcaggcgca > 1:3154905‑M1/1‑8 (MQ=255) ataCTTTTCGGTGACGAAAagtataatttctagatctttaaagtcttcaacagccttttgtacggcttctaatacgatatcaggcgcattt < 1:1492127‑M2/91‑73 (MQ=255) ataCTTTTCGGTGACGAAAagtataatttctagatctttaaagtcttcaacagccttttgtacggcttctaatacgatatcaggcgcattg < 1:1085589‑M2/91‑73 (MQ=255) ataCTTTTCGGTGACGAAAAAAAGTATAATCTGAACCATGAACGAATCGAATTTAGACATTGTTCTGAAAAGATTGAAATGGAAGATGAGc > 2:2053971/1‑91 (MQ=255) ataCTTTTCGGTGACGAAAAAAAGTATAATCTGAACCATGAACGAATCGAATTTAGACATTGTTCTGAAAAGATTGAAATGGAAGATGAGc > 1:2911257/1‑91 (MQ=255) ataCTTTTCGGTGACGAAAAAAAGTATAATCTGAACCATGAACGAATCGAATTTAGACATTGTTCTGAAAAGATTGAAATGGAAGATGAGc < 2:1505342/91‑1 (MQ=255) taCTTTTtttcgtcaccgaaaagtataatttctagatctttaaagtcttcaacagccttttgtacggcttctaatacgatatcaggcgaca < 1:78962‑M1/91‑85 (MQ=255) taCTTTTCGGTGACGAAAaaaaggtataatttctagatctttaaagtcttcaacagccttttgtacggcttctaatacgatatcaggcgca < 2:1700300‑M2/91‑74 (MQ=255) cTTTTCGGTGACGAAAAAAAGTATAATCTGAACCATGAACGAATCGAATTTAGACATTGTTCTGAAAAGATTGAAATGGAAGATGAGCCTg > 2:2029917/1‑91 (MQ=255) ttttCGGTGACGAAAAAAAGTATAATCTGAACCATGAACGAATCGAATTTAGACATTGTTCTGAAAAGATTGAAATGGAAGATGAGCCTGt < 1:3201670/91‑1 (MQ=255) ttttttcgtcaccgaaaagtataatttctagatctttaaagtcttcaacagccttttgtacggcttctaatacgatatcaggcgcattgtc > 1:3591275‑M1/1‑3 (MQ=255) tttttcgtcaccgaaaagtataatttctagatctttaaagtcttcaacagccttttgtacggcttctaatacgatatcaggcgcattgtcg < 2:148309‑M1/91‑90 (MQ=255) tttttcgtcaccgaaaagtataatttctagatctttaaagtcttcaacagccttttgtacggcttctaatacgatatcaggcgcattgtcg < 1:272911‑M1/91‑90 (MQ=255) tttttcgtcaccgaaaagtataatttctagatctttaaagtcttcaacagccttttgtacggcttctaatacgatatcaggcgcattgtcg < 1:2498422‑M1/91‑90 (MQ=255) ttttcgtcaccgaaaagtataatttctagatctttaaagtcttcaacagccttttgtacggcttctaatacgatatcaggcgcattgtcgc > 1:2923285‑M1/1‑1 (MQ=255) ttttcgtcaccgaaaagtataatttctagatctttaaagtcttcaacagccttttgtacggcttctaatacgatatcaggcgcattgtcgc < 1:3537012‑M1/91‑91 (MQ=255) | ATATGATGGGTGGCGACAATGCGCCTGATATCGTATTAGAAGCCGTACAAAAGGCTGTTGAAGACTTTAAAGATCTAGAAATTATACTTTTCGGTGACGAAAAAAAGTATAATCTGAACCATGAACGAATCGAATTTAGACATTGTTCTGAAAAGATTGAAATGGAAGATGAGCCTGTTAG > USA300TCH1516_ALE/1242582‑1242762 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |