| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | 1572911 = | 154 (0.810) | 14 (0.080) | 7/148 | NT | 9.7% | coding (4606/6201 nt) | USA300HOU_RS07705 | Glycyl‑glycine endopeptidase ALE‑1 |
| ? | USA300TCH1516_ALE | 1572951 = | 118 (0.670) | coding (4566/6201 nt) | USA300HOU_RS07705 | Glycyl‑glycine endopeptidase ALE‑1 | |||||
Only 100 of 197 total aligned reads displayed.
GCCAATCTTTCTTTTTCGTACCTCCATGAAACTTTGGTAAAACACCCATACGCTGTAACTTCAGAGTGTCATTAGCATTTATTACGCTATCCCCAACTCCTAGTGGAACAACCACATCTCGTCCTTGGGGTGCATGGAATGTTCCGTCAGCCCTGTGAATTACTTCTTGAACTCCACCACC > USA300TCH1516_ALE/1572821‑1573001 | tttgctgtattaaatgatagaggttctggaaacgccccaggtggtggagttcaagaagtaattcacagggctgacggaacattccatgcac > 2:2260445‑M1/91‑91 (MQ=255)gCCAATCTTTCTTTTTCGTACCTCCATGAAACTTTGGTAAAACACCCATACGCTGTAACTTCAGAGTGTCATTAGCATTTATTACGCTATc < 1:777225/91‑1 (MQ=255)gCCAATCTTTCTTTTTCGTACCTCCATGAAACTTTGGTAAAACACCCATACGCTGTAACTTCAGAGTGTCATTAGCATTTATTACGCTATc < 1:850948/91‑1 (MQ=255) ttgctgtattaaatgatagaggttctggaaacgccccaggtggtggagttcaagaagtaattcacagggctgacggaacattccatgcacc < 2:1770272‑M1/2‑1 (MQ=255) ccAATCTTTCTTTTTCGTACCTCCATGAAACTTTGGTAAAACACCCATACGCTGTAACTTCAGAGTGTCATTAGCATTTATTACGCTATcc < 2:1607504/91‑1 (MQ=255) tgctgtattaaatgatagaggttctggaaacgccccaggtggtggagttcaagaagtaattcacagggctgacggaacattccatgcaccc < 2:2579478‑M1/3‑1 (MQ=255) ctgtattaaatgatagaggttctggaaacgccccaggtggtggagttcaagaagtaattcacagggctgacggaacattccatgcaCCCCa > 2:761186‑M1/87‑91 (MQ=255) aTCTTTCTTTTTCGTACCTCCATGAAACTTTGGTAAAACACCCATACGCTGTAACTTCAGAGTGTCATTAGCATTTATTACGCTATCCCCa < 1:837812/91‑1 (MQ=255) aTCTTTCTTTTTCGTACCTCCATGAAACTTTGGTAAAACACCCATACGCTGTAACTTCAGAGTGTCATTAGCATTTATTACGCTATCCCCa < 2:1489678/91‑1 (MQ=255) ctttctttTTCGTACCTCCATGAAACTTTGGTAAAACACCCATACGCTGTAACTTCAGAGTGTCATTAGCATTTATTACGCTATCCCCAAc < 1:380521/91‑1 (MQ=255) ctttctttTTCGTACCTCCATGAAACTTTGGTAAAACACCCATACGCTGTAACTTCAGAGTGTCATTAGCATTTATTACGCTATCCCCAAc < 1:989235/91‑1 (MQ=255) tttctttTTCGTACCTCCATGAAACTTTGGTAAAACACCCATACGCTGTAACTTCAGAGTGTCATTAGCATTTATTACGCTATCCCCAACt > 1:3593402/1‑91 (MQ=255) tttctttTTCGTACCTCCATGAAACTTTGGTAAAACACCCATACGCTGTAACTTCAGAGTGTCATTAGCATTTATTACGCTATCCCCAACt > 2:2129042/1‑91 (MQ=255) ttctttTTCGTACCTCCATGAAACTTTGGTAAAACACCCATACGCTGTAACTTCAGAGTGTCATTAGCATTTATTACGCTATCCCCAACTc < 1:1356854/91‑1 (MQ=255) ttctttTTCGTACCTCCATGAAACTTTGGTAAAACACCCATACGCTGTAACTTCAGAGTGTCATTAGCATTTATTACGCTATCCCCAACTc < 2:1300995/91‑1 (MQ=255) tctttTTCGTACCTCCATGAAACTTTGGTAAAACACCCATACGCTGTAACTTCAGAGTGTCATTAGCATTTATTACGCTATCCCCAACTcc > 2:3109434/1‑91 (MQ=255) tctttTTCGTACCTCCATGAAACTTTGGTAAAACACCCATACGCTGTAACTTCAGAGTGTCATTAGCATTTATTACGCTATCCCCAACTcc > 1:1509172/1‑91 (MQ=255) tctttTTCGTACCTCCATGAAACTTTGGTAAAACACCCATACGCTGTAACTTCAGAGTGTCATTAGCATTTATTACGCTATCCCCAACTcc > 2:2163135/1‑91 (MQ=255) tctttTTCGTACCTCCATGAAACTTTGGTAAAACACCCATACGCTGTAACTTCAGAGTGTCATTAGCATTTATTACGCTATCCCCAACTcc > 1:1578455/1‑91 (MQ=255) ctttTTCGTACCTCCATGAAACTTTGGTAAAACACCCATACGCTGTAACTTCAGAGTGTCATTAGCATTTATTACGCTATCCCCAACTCCt > 1:2845786/1‑91 (MQ=255) ttttCGTACCTCCATGAAACTTTGGTAAAACACCCATACGCTGTAACTTCAGAGTGTCATTAGCATTTATTACGCTATCCCCAACTCCTAg < 2:1879104/91‑1 (MQ=255) ttttCGTACCTCCATGAAACTTTGGTAAAACACCCATACGCTGTAACTTCAGAGTGTCATTAGCATTTATTACGCTATCCCCAACTCCTAg < 2:769808/91‑1 (MQ=255) tCGTACCTCCATGAAACTTTGGTAAAACACCCATACGCTGTAACTTCAGAGTGTCATTAGCATTTATTACGCTATCCCCAACTCCTAGTgg > 2:1120403/1‑91 (MQ=255) tCGTACCTCCATGAAACTTTGGTAAAACACCCATACGCTGTAACTTCAGAGTGTCATTAGCATTTATTACGCTATCCCCAACTCCTAGTgg < 1:1923963/91‑1 (MQ=255) cGTACCTCCATGAAACTTTGGTAAAACACCCATACGCTGTAACTTCAGAGTGTCATTAGCATTTATTACGCTATCCCCAACTCCTAGTGGa > 2:2892452/1‑91 (MQ=255) gTACCTCCATGAAACTTTGGTAAAACACCCATACGCTGTAACTTCAGAGTGTCATTAGCATTTATTACGCTATCCCCAACTCCTAGTGGaa < 2:1242996/91‑1 (MQ=255) gTACCTCCATGAAACTTTGGTAAAACACCCATACGCTGTAACTTCAGAGTGTCATTAGCATTTATTACGCTATCCCCAACTCCTAGTGGaa > 2:2630082/1‑91 (MQ=255) tACCTCCATGAAACTTTGGTAAAACACCCATACGCTGTAACTTCAGAGTGTCATTAGCATTTATTACGCTATCCCCAACTCCTAGTGGaac > 2:1056660/1‑91 (MQ=255) tACCTCCATGAAACTTTGGTAAAACACCCATACGCTGTAACTTCAGAGTGTCATTAGCATTTATTACGCTATCCCCAACTCCTAGTGGaac < 2:450811/91‑1 (MQ=255) ccTCCATGAAACTTTGGTAAAACACCCATACGCTGTAACTTCAGAGTGTCATTAGCATTTATTACGCTATCCCCAACTCCTAGTGGaacaa > 2:532396/1‑91 (MQ=255) ccTCCATGAAACTTTGGTAAAACACCCATACGCTGTAACTTCAGAGTGTCATTAGCATTTATTACGCTATCCCCAACTCCTAGTGGaacaa > 1:1455393/1‑91 (MQ=255) ccATGAAACTTTGGTAAAACACCCATACGCTGTAACTTCAGAGTGTCATTAGCATTTATTACGCTATCCCCAACTCCTAGTGGAACAACca > 2:726553/1‑91 (MQ=255) cATGAAACTTTGGTAAAACACCCATACGCTGTAACTTCAGAGTGTCATTAGCATTTATTACGCTATCCCCAACTCCTAGTGGAACAACcac < 1:2201593/91‑1 (MQ=255) tGAAACTTTGGTAAAACACCCATACGCTGTAACTTCAGAGTGTCATTAGCATTTATTACGCTATCCCCAACTCCTAGTGGAACAACCACAt < 2:2802818/91‑1 (MQ=255) aaaCTTTGGTAAAACACCCATACGCTGTAACTTCAGAGTGTCATTAGCATTTATTACGCTATCCCCAACTCCTAGTGGAACAACCACAtct > 1:102057/1‑91 (MQ=255) aacgccccaggtggtggagttcaagaagtaattcacagggctgacggaacattccatgcaCCCCAACTCCTAGTGGAACAACCACATCTCg > 1:2378039‑M1/61‑91 (MQ=255) aCTTTGGTAAAACACCCATACGCTGTAACTTCAGAGTGTCATTAGCATTTATTACGCTATCCCCAACTCCTAGTGGAACAACCACATCTCg < 1:311565/91‑1 (MQ=255) cTTTGGTAAAACACCCATACGCTGTAACTTCAGAGTGTCATTAGCATTTATTACGCTATCCCCAACTCCTAGTGGAACAACCACATCTCGt > 1:228945/1‑91 (MQ=255) acgccccgggtggtggagttcaagaagtaattcacagggctgacggaacattccatgcaCCCCAACTCCTAGTGGAACAACCACATCTCGt > 2:1931368‑M1/60‑91 (MQ=255) acgccccaggtggtggagttcaagaagtaattcacagggctgacggaacattccatgcaCCCCAACTCCTAGTGGAACAACCACATCTCGt > 1:263359‑M1/60‑91 (MQ=255) acgccccaggtggtggagttcaagaagtaatgcacagtgctgacggaacattccatgcaCCCCAACTCCTAGGGGAACAACCACATCTCGt > 1:2524009‑M1/60‑91 (MQ=255) ttGGTAAAACACCCATACGCTGTAACTTCAGAGTGTCATTAGCATTTATTACGCTATCCCCAACTCCTAGTGGAACAACCACATCTCGTcc > 2:269535/1‑91 (MQ=255) ttGGTAAAACACCCATACGCTGTAACTTCAGAGTGTCATTAGCATTTATTACGCTATCCCCAACTCCTAGTGGAACAACCACATCTCGTcc > 2:3512897/1‑91 (MQ=255) tGGTAAAACACCCATACGCTGTAACTTCAGAGTGTCATTAGCATTTATTACGCTATCCCCAACTCCTAGTGGAACAACCACATCTCGTCCt > 2:432413/1‑91 (MQ=255) tGGTAAAACACCCATACGCTGTAACTTCAGAGTGTCATTAGCATTTATTACGCTATCCCCAACTCCTAGTGGAACAACCACATCTCGTCCt > 2:1909421/1‑91 (MQ=255) tGGTAAAACACCCATACGCTGTAACTTCAGAGTGTCATTAGCATTTATTACGCTATCCCCAACTCCTAGTGGAACAACCACATCTCGTCCt > 2:3799381/1‑91 (MQ=255) ccccaggtggtggagttcaagaagtaattcacagggctgacggaacattccatgcaCCCCAACTCCTAGTGGAACAACCACATCTCGTCCt > 2:1184918‑M1/57‑91 (MQ=255) gTAAAACACCCATACGCTGTAACTTCAGAGTGTCATTAGCATTTATTACGCTATCCCCAACTCCTAGTGGAACAACCACATCTCGTCCTTg > 2:3752347/1‑91 (MQ=255) gTAAAACACCCATACGCTGTAACTTCAGAGTGTCATTAGCATTTATTACGCTATCCCCAACTCCTAGTGGAACAACCACATCTCGTCCTTg > 1:115659/1‑91 (MQ=255) ccaggtggtggagttcaagaagtaattcacagggctgacggaacattccatgcaCCCCAACTCCTAGTGGAACAACCACATCTCGTCCTTg > 1:1010264‑M1/55‑91 (MQ=255) aaaaCACCCATACGCTGTAACTTCAGAGTGTCATTAGCATTTATTACGCTATCCCCAACTCCTAGTGGAACAACCACATCTCGTCCTTggg < 2:3762013/91‑1 (MQ=255) aaaaCACCCATACGCTGTAACTTCAGAGTGTCATTAGCATTTATTACGCTATCCCCAACTCCTAGTGGAACAACCACATCTCGTCCTTggg > 2:2176359/1‑91 (MQ=255) aaaCACCCATACGCTGTAACTTCAGAGTGTCATTAGCATTTATTACGCTATCCCCAACTCCTAGTGGAACAACCACATCTCGTCCTTgggg > 1:3460140/1‑91 (MQ=255) aaCACCCATACGCTGTAACTTCAGAGTGTCATTAGCATTTATTACGCTATCCCCAACTCCTAGTGGAACAACCACATCTCGTCCTTGGGGt < 1:949840/91‑1 (MQ=255) acacCCATACGCTGTAACTTCAGAGTGTCATTAGCATTTATTACGCTATCCCCAACTCCTAGTGGAACAACCACATCTCGTCCTTGGGGTg > 1:3796763/1‑91 (MQ=255) acCCATACGCTGTAACTTCAGAGTGTCATTAGCATTTATTACGCTATCCCCAACTCCTAGTGGAACAACCACATCTCGTCCTTGGGGTGCa > 1:2724615/1‑91 (MQ=255) cccATACGCTGTAACTTCAGAGTGTCATTAGCATTTATTACGCTATCCCCAACTCCTAGTGGAACAACCACATCTCGTCCTTGGGGTGCAt > 2:3295424/1‑91 (MQ=255) cATACGCTGTAACTTCAGAGTGTCATTAGCATTTATTACGCTATCCCCAACTCCTAGTGGAACAACCACATCTCGTCCTTGGGGTGCATgg > 2:2941412/1‑91 (MQ=255) cATACGCTGTAACTTCAGAGTGTCATTAGCATTTATTACGCTATCCCCAACTCCTAGTGGAACAACCACATCTCGTCCTTGGGGTGCATgg < 1:2214467/91‑1 (MQ=255) aTACGCTGTAACTTCAGAGTGTCATTAGCATTTATTACGCTATCCCCAACTCCTAGTGGAACAACCACATCTCGTCCTTGGGGTGCATGGa < 2:559859/91‑1 (MQ=255) tACGCTGTAACTTCAGAGTGTCATTAGCATTTATTACGCTATCCCCAACTCCTAGTGGAACAACCACATCTCGTCCTTGGGGTGCATGGaa < 2:1993763/91‑1 (MQ=255) cGCTGTAACTTCAGAGTGTCATTAGCATTTATTACGCTATCCCCAACTCCTAGTGGAACAACCACATCTCGTCCTTGGGGTGCATGGAATg > 2:589092/1‑91 (MQ=255) cGCTGTAACTTCAGAGTGTCATTAGCATTTATTACGCTATCCCCAACTCCTAGTGGAACAACCACATCTCGTCCTTGGGGTGCATGGAATg < 2:3176174/91‑1 (MQ=255) cTGTAACTTCAGAGTGTCATTAGCATTTATTACGCTATCCCCAACTCCTAGTGGAACAACCACATCTCGTCCTTGGGGTGCATGGAATGtt < 2:3124988/91‑1 (MQ=255) cTGTAACTTCAGAGTGTCATTAGCATTTATTACGCTATCCCCAACTCCTAGTGGAACAACCACATCTCGTCCTTGGGGTGCATGGAATGtt < 1:2785886/91‑1 (MQ=255) gTAACTTCAGAGTGTCATTAGCATTTATTACGCTATCCCCAACTCCTAGTGGAACAACCACATCTCGTCCTTGGGGTGCATGGAATGTTcc > 2:383378/1‑91 (MQ=255) gTAACTTCAGAGTGTCATTAGCATTTATTACGCTATCCCCAACTCCTAGTGGAACAACCACATCTCGTCCTTGGGGTGCATGGAATGTTcc > 1:3553358/1‑91 (MQ=255) aaCTTCAGAGTGTCATTAGCATTTATTACGCTATCCCCAACTCCTAGTGGAACAACCACATCTCGTCCTTGGGGTGCATGGAATGTTCCGt < 1:2152862/91‑1 (MQ=255) aaCTTCAGACTGTCATTAGCATTTATTACGCTATCCCCAACTCCTAGTGGAACAACCACATCTCGTCCTTGGGGTGCATGGAATGTTCCGt < 1:3482052/91‑1 (MQ=255) ttCAGAGTGTCATTAGCATTTATTACGCTATCCCCAACTCCTAGTGGAACAACCACATCTCGTCCTTGGGGTGCATGGAATGTTCCGTCAg > 2:1022239/1‑91 (MQ=255) tCAGAGTGTCATTAGCATTTATTACGCTATCCCCAACTCCTAGTGGAACAACCACATCTCGTCCTTGGGGTGCATGGAATGTTCCGTCAGc > 1:4673/1‑91 (MQ=255) agagTGTCATTAGCATTTATTACGCTATCCCCAACTCCTAGTGGAACAACCACATCTCGTCCTTGGGGTGCATGGAATGTTCCGGCAGccc > 2:1610445/1‑91 (MQ=255) gagTGTCATTAGCATTTATTACGCTATCCCCAACTCCTAGTGGAACAACCACATCTCGTCCTTGGGGTGCATGGAATGTTCCGTCAGCCCt < 1:3505568/91‑1 (MQ=255) tgtCATTAGCATTTATTACGCTATCCCCAACTCCTAGTGGAACAACCACATCTCGTCCTTGGGGTGCATGGAATGTTCCGTCAGCCCtgtg > 2:988046/1‑91 (MQ=255) tgtCATTAGCATTTATTACGCTATCCCCAACTCCTAGTGGAACAACCACATCTCGTCCTTGGGGTGCATGGAATGTTCCGTCAGCCCtgtg < 1:2892452/91‑1 (MQ=255) tgtCATTAGCATTTATTACGCTATCCCCAACTCCTAGTGGAACAACCACATCTCGTCCTTGGGGTGCATGGAATGTTCCGTCAGCCCtgtg < 1:2163135/91‑1 (MQ=255) tCATTAGCATTTATTACGCTATCCCCAACTCCTAGTGGAACAACCACATCTCGTCCTTGGGGTGCCTGGAATGTTCCGTCAGCCCTGTGaa > 1:1769203/1‑91 (MQ=255) tCATTAGCATTTATTACGCTATCCCCAACTCCTAGTGGAACAACCACATCTCGTCCTTGGGGTGCATGGAATGTTCCGTCAGCCCTGTGaa > 1:3822022/1‑91 (MQ=255) cATTAGCATTTATTACGCTATCCCCAACTCCTAGTGGAACAACCACATCTCGTCCTTGGGGTGCATGGAATGTTCCGTCAGCCCTGTGAAt < 1:566484/91‑1 (MQ=255) cATTAGCATTTATTACGCTATCCCCAACTCCTAGTGGAACAACCACATCTCGTCCTTGGGGTGCATGGAATGTTCCGTCAGCCCTGTGAAt < 1:3336708/91‑1 (MQ=255) cATTAGCATTTATTACGCTATCCCCAACTCCTAGTGGAACAACCACATCTCGTCCTTGGGGTGCATGGAATGTTCCGTCAGCCCTGTGAAt > 1:3048507/1‑91 (MQ=255) ttAGCATTTATTACGCTATCCCCAACTCCTAGTGGAACAACCACATCTCGTCCTTGGGGTGCATGGAATGTTCCGTCAGCCCTGTGAATTa < 1:3385974/91‑1 (MQ=255) tAGCATTTATTACGCTATCCCCAACTCCTAGTGGAACAACCACATCTCGTCCTTGGGGTGCATGGAATGTTCCGTCAGCCCTGTGAATTAc < 1:112378/91‑1 (MQ=255) tAGCATTTATTACGCTATCCCCAACTCCTAGTGGAACAACCACATCTCGTCCTTGGGGTGCATGGAATGTTCCGTCAGCCCTGTGAATTAc < 1:112206/91‑1 (MQ=255) tAGCATTTATTACGCTATCCCCAACTCCTAGTGGAACAACCACATCTCGTCCTTGGGGTGCATGGAATGTTCCGTCAGCCCTGTGAATTAc < 2:2272200/91‑1 (MQ=255) aGCATTTATTACGCTATCCCCAACTCCTAGTGGAACAACCACATCTCGTCCTTGGGGTGCATGGAATGTTCCGTCAGCGCTGTGAATTAct < 1:2979569/91‑1 (MQ=255) aGCATTTATTACGCTATCCCCAACTCCTAGTGGAACAACCACATCTCGTCCTTGGGGTGCATGGAATGTTCCGTCAGCCCTGTGAATTAct > 2:2495912/1‑91 (MQ=255) gCATTTATTACGCTATCCCCAGCTCCTAGTGGAACAACCACATCTCGTCCTTGGGGTGCATGGAATGTTCCGTCAGCCCTGTGAATTActt < 2:3494875/91‑1 (MQ=255) aTTTATTACGCGATCCCCAACTCCTAGTGGAACAACCACATCTCGTCCTTGGGGTGCATGGAATGTTCCGTCAGCCCTGTGAATTActtct < 1:3512897/91‑1 (MQ=255) tttATTACGCTATCCCCAACTCCTAGTGGAACAACCACATCTCGTCCTTGGGGTGCATGGAATGTTCCGTCAGCCCTGTGAATTActtctt < 1:3316310/91‑1 (MQ=255) attaCGCTATCCCCAACTCCTAGTGGAACAACCACATCTCGTCCTTGGGGTGCATGGAATGTTCCGTCAGCCCTGTGAATTACTTCTTGaa < 1:1697733/91‑1 (MQ=255) attaCGCTATCCCCAACTCCTAGTGGAACAACCACATCTCGTCCTTGGGGTGCATGGAATGTTCCGTCAGCCCTGTGAATTACTTCTTGaa > 2:1043559/1‑91 (MQ=255) attaCGCGACCCCCAACTCCTAGGGGAACAACCCGGTCTCGTCCTCGGGGTGCATGAAACGTTCCGGCAGCCCTGTGAATTACTTCTTGaa < 2:46676/91‑1 (MQ=255) aCGCTATCCCCAACTCCTAGTGGAACAACCACATCTCGTCCTTGGGGTGCATGGAATGTTCCGTCAGCCCTGTGAATTACTTCTTGAACTc > 1:3092214/1‑91 (MQ=255) aCGCTATCCCCAACTCCTAGTGGAACAACCACATCTCGTCCTTGGGGTGCATGGAATGTTCCGTCAGCCCTGTGAATTACTTCTTGAACTc > 2:606095/1‑91 (MQ=255) aCGCTATCCCCAACTCCTAGTGGAACAACCACATCTCGTCCTTGGGGTGCATGGAATGTTCCGTCAGCCCTGTGAATTACTTCTTGAACTc > 1:3834565/1‑91 (MQ=255) cGCTATCCCCAACTCCTAGTGGAACAACCACATCTCGTCCTTGGGGTGCATGGAATGTTCCGTCAGCCCTGTGAATTACTTCTTGAACTcc > 1:1535401/1‑91 (MQ=255) gCTATCCCCAACTCCTAGTGGAACAACCACATCTCGTCCTTGGGGTGCATGGAATGTTCCGTCAGCCCTGTGAATTACTTCTTGAACTcca < 2:478755/91‑1 (MQ=255) gCTATCCCCAACTCCTAGTGGAACAACCACATCTCGTCCTTGGGGTGCATGGAATGTTCCGTCAGCCCTGTGAATTACTTCTTGAACTcca < 2:2391127/91‑1 (MQ=255) cTATCCCCAACTCCTAGTGGAACAACCACATCTCGTCCTTGGGGTGCATGGAATGTTCCGTCAGCCCTGTGAATTACTTCTTGAACTccac < 1:1348688/91‑1 (MQ=255) | GCCAATCTTTCTTTTTCGTACCTCCATGAAACTTTGGTAAAACACCCATACGCTGTAACTTCAGAGTGTCATTAGCATTTATTACGCTATCCCCAACTCCTAGTGGAACAACCACATCTCGTCCTTGGGGTGCATGGAATGTTCCGTCAGCCCTGTGAATTACTTCTTGAACTCCACCACC > USA300TCH1516_ALE/1572821‑1573001 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |