| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | = 1586059 | 238 (1.250) | 16 (0.090) | 5/148 | NT | 6.6% | intergenic (‑52/+75) | USA300HOU_RS07770/USA300TCH1516_01451 | hypothetical protein/hypothetical protein |
| ? | USA300TCH1516_ALE | = 1586098 | 235 (1.330) | intergenic (‑91/+36) | USA300HOU_RS07770/USA300TCH1516_01451 | hypothetical protein/hypothetical protein | |||||
Only 100 of 337 total aligned reads displayed.
TATATATTCTTTCAGCTGTTTTTTTGTTAATTTCATATAAAGACCCCCTTTCATAAAAGTTTATCCGCGTTGCAAGCGAAGGGCCCCCGCCGGTACCCGGCGAAAAAACATTTTAAGCCAATGGGCAGGGGGCTATAAAATTTTATTTAAATGTTTTTTTATTTAAATTTTTAGAACT > USA300TCH1516_ALE/1585972‑1586149 | tatataTTCTTTCAGCTGTTTTTTTGTTAATTTCATATAAAGACCCCCTTTCATAAAAGTTTATCCGCGTTGCAAGCGAAGGGCCCccgcc < 2:1033442/91‑1 (MQ=255) tatatTCTTTCAGCTGTTTTTTTGTTAATTTCATATAAAGACCCCCTTTCATAAAAGTTTATCCGCGTTGCAAGCGAAGGGCCCCCGCCgg > 1:403793/1‑91 (MQ=255) tatatTCTTTCAGCTGTTTTTTTGTTAATTTCATATAAAGACCCCCTTTCATAAAAGTTTATCCGCGTTGCAAGCGAAGGGCCCCCGCCgg < 1:647017/91‑1 (MQ=255) tatTCTTTCAGCTGTTTTTTTGTTAATTTCATATAAAGACCCCCTTTCATAAAAGTTTATCCGCGTTGCAAGCGAAGGGCCCCCGCCGGtt > 2:3200993/1‑90 (MQ=255) atTCTTTCAGCTGTTTTTTTGTTAATTTCATATAAAGACCCCCTTTCATAAAAGTTTATCCGCGTTGCAAGCGAAGGGCCCCCGCCgggta < 2:3084344/91‑4 (MQ=255) ttCGTTCAGCTGTTTTTTTGTTAATTTCATATAAAGACCCCCTTTCATAAAAGTTTATCCGCGTTGCAAGCGAAGGGCCCCCGCCGGTAcc < 1:3009092/91‑1 (MQ=255) cTTTCAGCTGTTTTTTTGTTAATTTCATATAAAGACCCCCTTTCATAAAAGTTTATCCGCGTTGCAAGCGAAGGGCCCCCGCCGGTACCCg > 1:171342/1‑91 (MQ=255) ttCAGCTGTTTTTTTGTTTATTTCATATAAAGACCCCCTTTCATAAAAGTTTATCCGCGTTGCAAGCGAAGGGCCCCCGCCGGTACCCGGc > 2:1437034/1‑91 (MQ=255) tCAGCTGTTTTTTTGTTAATTTCATATAAAGACCCCCTTTCATAAAAGTTTATCCGCGTTGCAAGCGAAGGGCCCCCGCCGGTACCCGGCg > 1:2342257/1‑91 (MQ=255) cAGCTGTTTTTTTGTTAATTTCATATAAAGACCCCCTTTCATAAAAGTTTATCCGCGTTGCAAGCGAAGGGCCCCCGCCGGTACCCGGCGa < 1:1178730/91‑1 (MQ=255) cAGCTGTTTTTTTGTTAATTTCATATAAAGACCCCCTTTCATAAAAGTTTATCCGCGTTGCAAGCGAAGGGCCCCCGCCGGTACCCGGCGa > 2:1599816/1‑91 (MQ=255) cAGCTATTTTTTTGTTAATTTCATATAAAGACCCCCTTTCATAAAAGTTTATCCGCGTTGCAAGCGAAGGGCCCCCGCCGGTACCCGGCGa < 2:1126015/91‑1 (MQ=255) gCTGTTTTTTTGTTAATTTCATATAAAGACCCCCTTTCATAAAAGTTTATCCGCGTTGCAAGCGAAGGGCCCCCGCCGGTACCCGGCGaaa < 1:127187/91‑1 (MQ=255) gCTGTTTTTTTGTTAATTTCATATAAAGACCCCCTTTCATAAAAGTTTATCCGCGTTGCAAGCGAAGGGCCCCCGCCGGTACCCGGCGaaa > 1:2711920/1‑91 (MQ=255) gCTGTTTTTTTGTTAATTTCATATAAAGACCCCCTTTCATAAAAGTTTATCCGCGTTGCAAGCGAAGGGCCCCCGCCGGTACCCGGCGaaa < 1:2213437/91‑1 (MQ=255) cTGTTTTTTTGTTAATTTCATATAAAGACCCCCTTTCATAAAAGTTTATCCGCGTTGCAAGCGAAGGGCCCCCGCCGGTACCCGGCGaaaa < 1:1024012/91‑1 (MQ=255) tttttttGTTAATTTCATATAAAGACCCCCTTTCATAAAAGTTTATCCGCGTTGCAAGCGAAGGGCCCCCGCCGGTACCCGGCGAAAAAAc > 1:520858/1‑91 (MQ=255) tttttttGTTAATTTCATATAAAGACCCCCTTTCATAAAAGTTTATCCGCGTTGCAAGCGAAGGGCCCCCGCCGGTACCCGGCGAAAAAAc < 1:3547630/91‑1 (MQ=255) ttGTTATTTTTATATAAAGACCCCCTTTCATAAAAGTTTATCCGCGTTGCAAGCGAAGGGCCCCCGCCGGTACCCGGCGAAAAAACAtttt > 2:1478252/1‑91 (MQ=255) tGTTAATTTCATATACAGACCCCCTTTCATAAAAGTTTATCCGCGTTGCAAGCGAAGGACCCCCGCCGGTACCCGGCGAAAAAACATTTTa > 1:3316104/1‑91 (MQ=255) tGTTAATTTCATATAAAGACCCCCTTTCATAAAAGTTTATCCGCGTTGCAAGCGAAGGGCCCCCGCCGGTACCCGGCGAAAAAACATTTTa > 2:2925460/1‑91 (MQ=255) gTTAATTTCATATAAAGACCCCCTTTCATAAAAGTTTATCCGCGTTGCAAGCGAAGGGCCCCCGCCGGTACCCGGCGAAAAAACATTTTaa < 1:840776/91‑1 (MQ=255) ttAATTTCATATAAAGACCCCCTTTCATAAAAGTTTATCCGCGTTGCAAGCGAAGGGCCCCCGCCGGTACCCGGCGAAAAAACATTTTAAg > 1:2428772/1‑91 (MQ=255) tAATTTCATATAAAGACCCCCTTTCATAAAAGTTTATCCGCGTTGCAAGCGAAGGGCCCCCGCCGGTACCCGGCGAAAAAACATTTTAAGc > 1:3333449/1‑91 (MQ=255) ttttCATATAAAGACCCCCTTTCATAAAAGTTTATCCGCGTTGCAAGCGAAGGGCCCCCGCCGGTACCCGGCGAAAAAACATTTTAAGCCa > 2:2998706/2‑91 (MQ=255) aTTTCATATAAAGACCCCCTTTCATAAAAGTTTATCCGCGTTGCAAGCGAAGGGCCCCCGCCGGTACCCGGCGAAAAAACATTTTAAGCCa < 1:3679590/91‑1 (MQ=255) tttCATATAAAGACCCCCTTTCATAAAAGTTTATCCGCGTTGCAAGCGAAGGGCCCCCGCCGGTACCCGGCGAAAAAACATTTTAAGCCaa < 1:704365/91‑1 (MQ=255) tCATATAAAGACCCCCTTTCATAAAAGTTTATCCGCGTTGCAAGCGAAGGGCCCCCGCCGGTACCCGGCGAAAAAACATTTTAAGCCAATg < 2:1901839/91‑1 (MQ=255) cATATAAAGACCCCCTTTCATAAAAGTTTATCCGCGTTGCAAGCGAAGGGCCCCCGCCGGTACCCGGCGAAAAAACATTTTAAGCCAATgg < 2:2140531/91‑1 (MQ=255) atatAAAGACCCCCTTTCATAAAAGTTTATCCGCGTTGCAAGCGAAGGGCCCCCGCCGGTACCCGGCGAAAAAACATTTTAAGCCAATggg < 2:1737574/91‑1 (MQ=255) atatAAAGACCCCCTTTCATAAAAGTTTATCCGCGTTGCAAGCGAAGGGCCCCCGCCGGTACCCGGCGAAAAAACATTTTAAGCCAATggg > 2:3518665/1‑91 (MQ=255) atatAAAGACCCCCTTTCATAAAAGTTTATCCGCGTTGCAAGCGAAGGGCCCCCGCCGGTACCCGGCGAAAAAACATTTTAAGCCAATggg > 1:3745440/1‑91 (MQ=255) tataAAGACCCCCTTTCATAAAAGTTTATCCGCGTTGCAAGCGAAGGGCCCCCGCCGGTACCCGGCGAAAAAACATTTTAAGCCAATGGGc > 1:2140938/1‑91 (MQ=255) tataAAGACCCCCTTTCATAAAAGTTTATCCGCGTTGCAAGCGAAGGGCCCCCGCCGGTACCCGGCGAAAAAACATTTTAAGCCAATGGGc > 1:886763/1‑91 (MQ=255) tataAAGACCCCCTTTCATAAAAGTTTATCCGCGTTGCAAGCGAAGGGCCCCCGCCGGTACCCGGCGAAAAAACATTTTAAGCCAATGGGc > 1:886975/1‑91 (MQ=255) tataAAGACCCCCTTTCATAAAAGTTTATCCGCGTTGCAAGCGAAGGGCCCCCGCCGGTACCCGGCGAAAAAACATTTTAAGCCAATGGGc > 1:1882194/1‑91 (MQ=255) ataAAGACCCCCTTTCATAAAAGTTTATCCGCGTTGCAAGCGAAGGGCCCCCtgcccattggcttaaaatgttttttcgccgggtaccggc < 2:3657414‑M1/91‑40 (MQ=255) aaaGACCCCCTTTCATAAAAGTTTATCCGCGTTGCAAGCGAAGGGCCCCCtgcccattggcttaaaatgttttttcgccgggtaccggcgg < 1:2505394‑M1/91‑42 (MQ=255) aaaGACCCCCTTTCATAAAAGTTTATCCGCGTTGCAAGCGAAGGGCCCCCGCCGGTACCCGGCGAAAAAACATTTTAAGCCAATGGGCAgg < 2:2299021‑M2/91‑3 (MQ=255) aaaGACCCCCTTTCATAAAAGTTTATCCGCGTTGCAAGCGAAGGGCCCCCGCCGGTACCCGGCGAAAAAACATTTTAAGCCAATGGGCAgg < 2:2196226‑M2/91‑3 (MQ=255) aaaGACCCCCTTTCATAAAAGTTTATCCGCGTTGCAAGCGAAGGGCCCCCGCCGGTACCCGGCGAAAAAACATTTTAAGCCAATGGGCAgg < 2:1926606‑M2/91‑3 (MQ=255) aaaGACCCCCTTTCATAAAAGTTTATCCGCGTTGCAAGCGAAGGGCCCCCGCCGGTACCCGGCGAAAAAACATTTTAAGCCAATGGGCAgg < 2:889806‑M2/91‑3 (MQ=255) aaGACCCCCTTTCATAAAAGTTTATCCGCGTTGCAAGCGAAGGGCCCCCGCCGGTACCCGGCGAAAAAACATTTTAAGCCAATGGGCAggg < 1:2775641‑M2/91‑4 (MQ=255) tatccccctttCATAAAAGTTTATCCGCGTTGCAAGCGAAGGGCCCCCtgcccatcggcttaaaatgttttttcgccgggtaccggcgggg < 1:2545611‑M1/88‑44 (MQ=255) aGACCCCCTTTCATAAAAGTTTATCCGCGTTGCAAGCGAAGGGCCCCCtgcccattggcttaaaatgttttttcgccgggtaccggcgggg < 1:3840124‑M1/91‑44 (MQ=255) aGACCCCCTTTCATAAAAGTTTATCCGCGTTGCAAGCGAAGGGCCCCCGCCGGTACCCGGCGAAAAAACATTTTAAGCCAATGGGCAgggg > 1:1961327‑M2/1‑87 (MQ=255) tccccctTTCATAAAAGTTTATCCGCGTTGCAAGCGAAGGGCCCCCtgcccatcggcttaaaatgttttttcgccgggtaccggcgggggc < 2:2004288‑M1/90‑46 (MQ=255) aCCCCCTTTCATAAAAGTTTATCCGCGTTGCAAGCGAAGGGCCCCCGCCGGTACCCGGCGAAAAAACATTTTAAGCCAATGGGCAgggggc > 2:3786098‑M2/1‑85 (MQ=255) ccccTTTCATAAAAGTTTATCCGCGTTGCAAGCGAAGGGCCCCCGCCGGTACCCGGCGAAAAAACATTTTAAGCCAATGGGCAgggggtaa < 1:2304267‑M2/91‑9 (MQ=255) ccccTTTCATAAAAGTTTATCCGCGTTGCAAGCGAAGGGCCCCCGCCGGTACCCGGCGAAAAAACATTTTAAGCCAATGGGCAGGGGGCta < 2:2687107/91‑1 (MQ=34) cccTTTCATAAAAGTTTATCCGCGTTGCAAGCGAAGGGCCCCCGCCGGTACCCGGCGAAAAAACATTTTAAGCCAATGGGCAGGGGGCtat > 1:1187865/1‑91 (MQ=33) cccTTTCATAAAAGTTTATCCGCGTTGCAAGCGAAGGGCCCCCGCCGGTACCCGGCGAAAAAACATTTTAAGCCAATGGGCAGGGGGCtat > 2:649499/1‑91 (MQ=34) ccTTTCATAAAAGTTTATCCGCGTTGCAAGCGAAGGGCCCCCGCCGGTACCCGGCGACAAAACATTTTAAGCCAATGGGCAGGGGGCtata > 1:3176330/1‑91 (MQ=18) ccTTTCATAAAAGTTTATCCGCGTTGCAAGCGAAGGGCCCCCGCCGGTACCCGGCGAAAAAACATTTTAAGCCAATGGGCAGGGGGCtata < 1:2941641/91‑1 (MQ=34) cTTTCATAAAAGTTTATCCGCGTTGCAAGCGAAGGGCCCCCGCCGGTACCCGGCGAAAAAACATTTTAAGCCAATGGGCAGGGGGCTATaa > 1:3574415/1‑91 (MQ=34) tttCATAAAAGTTTATCCGCGTTGCAAGCGAAGGGCCCCCGCCGGTACCCGGCGAAAAAACATTTTAAGCCAATGGGCAGGGGGCTATaaa > 1:1150085/1‑91 (MQ=34) tttCATAAAAGTTTATCCGCGTTGCAAGCGAAGGGCCCCCGCCGGTACCCGGCGAAAAAACATTTTAAGCCAATGGGCAGGGGGCTATaaa > 2:410789/1‑91 (MQ=34) tttCATAAAAGTTTATCCGCGTTGCAAGCGAAGGGCCCCCGCCGGTACCCGGCGAAAAAACATTTTAAGCCAATGGGCAGGGGGCTATaaa < 1:1942175/91‑1 (MQ=34) tCATAAAAGTTTATCCGCGTTGCAAGCGAAGGGCCCCCGCCGGTACCCGGCGAAAAAACATTTTAAGCCAATGGGCAGGGGGCTATAAAAt > 2:1368204/1‑91 (MQ=34) tCATAAAAGTTTATCCGCGTTGCAAGCGAAGGGCCCCCGCCGGTACCCGGCGAAAAAACATTTTAAGCCAATGGGCAGGGGGCTATAAAAt > 2:690952/1‑91 (MQ=33) cATAAAAGTTTATCCGCGTTGCAAGCGAAGGGCCCCCGCCGGTACCCGGCGAAAAAACATTTTAAGCCAATGGGCAGGGGGCTATAAAAtt < 1:630487/91‑1 (MQ=34) aTAAAAGTTTATCCGCGTTGCAAGCGAAGGGCCCCCGCCGGTACCCGGCGAAAAAACATTTTAAGCCAATGGGCAGGGGGCTATAAAAttt > 1:3471437/1‑91 (MQ=34) aTAAAAGTTTATCCGCGTTGCAAGCGAAGGGCCCCCGCCGGTACCCGGCGAAAAAACATTTTAAGCCAATGGGCAGGGGGCTATAAAAttt > 2:2521645/1‑91 (MQ=34) aaaGTTTATCCGCGTTGCAAGCGAAGGGCCCCCGCCGGTACCCGGCGAAGAAACATTTTAAGCCAATGGGCAGGGGGCTATAAAATtttat < 1:3367570/91‑1 (MQ=21) aaaGTTTATCCGCGTTGCAAGCGAAGGGCCCCCGCCGGTACCCGGCGAAAAAACATTTTAAGCCAATGGGCAGGGGGCTATAAAATtttat > 2:2179709/1‑91 (MQ=34) aGTTTATCCGCGTTGCAAGCGAAGGGCCCCCGCCGGTACCTGGTGAAAAAACATTTTAAGCCAATGGGCAGGGGGCTATAAAATtttattt > 2:717324/1‑91 (MQ=16) gTTTATCCGCGTTGCAAGCGAAGGGCCCCCGCCGGTACCCGGCGAAAAAACATTTTAAGCCAATGGGCAGGGGGCTATAAAATtttattta > 1:161340/1‑91 (MQ=34) gTTTATCCGCGTTGCAAGCGAAGGGCCCCCGCCGGTACCCGGCGAAAAAACATTTTAAGCCAATGGGCAGGGGGCTATAAAATtttattta < 2:2075978/91‑1 (MQ=34) gTTTATCCGCGTTGCAAGCGAAGGGCCCCCGCCGGTACCCGGCGAAAAAACATTTTAAGCCAATGGGCAGGGGGCTATAAAATtttattta < 1:3727308/91‑1 (MQ=34) tttATCCGCGTTGCAAGCGAAGGGCCCCCGCCGGTACCCGGCGAAAAAACATTTTAAGCCAATGGGCAGGGGGCTATAAAATTTTATTTaa < 1:1837494/91‑1 (MQ=34) ttATCCGCGTTGCAAGCGAAGGGCCCCCGCCGGTACCCGGCGAAAAAACATTTTAAGCCAATGGGCAGGGGGCTATAAAATTTTATTTaaa < 1:1458110/91‑1 (MQ=33) tgaTCCGCGTTGCAAGCGAAGGGCCCCCGCCGGTAACCGGAAAAAAAACATTTTAAGCCAATGGGCAGGGGGCTATAAAATTTTATTTaaa < 2:595419/89‑1 (MQ=11) tATCCGCGTTGCAAGCGAAGGGCCCCCGCCGGTACCCGGCGAAAAAACATTTTAAGCCAATGGGCAGGGGGCTATAAAATTTTATTTAAAt > 1:959429/1‑91 (MQ=34) tATCCGCGTTGCAAGCGAAGGGCCCCCGCCGGTACCCGGCGAAAAAACATTTTAAGCCAATGGGCAGGGGGCTATAAAATTTTATTTAAAt > 1:615914/1‑91 (MQ=34) tATCCGCGTTGCAAGCGAAGGGCCCCCGCCGGTACCCGGCGAAAAAACATTTTAAGCCAATGGGCAGGGGGCTATAAAATTTTATTTAAAt > 1:1374512/1‑91 (MQ=34) tATCCGCGTTGCAAGCGAAGGGCCCCCGCCGGTACCCGGCGAAAAAACATTTTAAGCCAATGGGCAGGGGGCTATAAAATTTTATTTAAAt > 1:3407315/1‑91 (MQ=34) tCCGCGTTGCAAGCGAAGGGCCCCCGCCGGTACCCGGCGAAAAAACATTTTAAGCCAATGGGCAGGGGGCTATAAAATTTTATTTAAATGt < 2:2047366/91‑1 (MQ=37) ccGCGTTGCAAGCGAAGGGCCCCCGCCGGTACCCGGCGAAAAAACATTTTAAGCCAATGGGCAGGGGGCTATAAAATTTTATTTAAATGtt > 1:1904207/1‑91 (MQ=38) cgcgTTGCAAGCGAAGGGCCCCCGCCGGTACCCGGCGAAAAAACATTTTAAGCCAATGGGCAGGGGGCTATAAAATTTTATTTAAATGttt > 1:740808/1‑91 (MQ=39) gcgTTGCAAGCGAAGGGCCCCCGCCGGTACCCGGCGAAAAAACATTTTAAGCCAATGGGCAGGGGGCTATAAAATTTTATTTAAATGtttt < 2:3701720/91‑1 (MQ=39) gTTGCAAGCGAAGGGCCCCCGCCGGTACCCGGCGAAAAAACATTTTAAGCCAATGGGCAGGGGGCTATAAAATTTTATTTAAATGtttttt < 2:2646334/91‑1 (MQ=255) aaGCGAAGGGCCGCCGCCGGTACGCGGCGAAAAAACATTTTAAGCCATTGGGCAGGGGGCTATAAAATTTTATTTAAATGTTTTtttattt < 2:3644750/91‑1 (MQ=255) aaGCGAAGGGCCCCCGCCGGTACCTGGCGAAAAAACATTTTAAGCCAATGGGCAGGGGGCTATAAAATTTTATTTAAATGTTTTtttattt < 2:3614961/91‑1 (MQ=255) aGCGAAGGGCCCCCGCCGGTACCCGGCGAAAAAACATTTTAAGCCAATGGGCAGGGGGCTATAAAATTTTATTTAAATGTTTTtttattta > 1:1676086/1‑91 (MQ=255) gCGAAGGGCCCCCGCCGGTACCCGGCGAAAAAACATTTTAAGCCAATGGGCAGGGGGCTATAAAATTTTATTTAAATGTTTTTTTATTTaa > 2:2791047/1‑91 (MQ=255) gCGAAGGGCCCCCGCCGGTACCCGGCGAAAAAACATTTTAAGCCAATGGGCAGGGGGCTATAAAATTTTATTTAAATGTTTTTTTATTTaa > 1:2817089/1‑91 (MQ=255) gAAGGGCCCCCGCCGGTACCCGGCGAAAAAACATTTTAAGCCAATGGGCAGGGGGCTATAAAATTTTATTTAAATGTTTTTTTATTTAAAt > 2:1197745/1‑91 (MQ=255) gggCCCCCGCCGGTACCCGGCGAAAAAACATTTTAAGCCACTGGGCAGGGGGCTATAAAATTTTATTTAAATGTTTTTTTATTTAAAtttt > 2:3333251/1‑91 (MQ=255) gCCCCCtgcccattggcttaaaatgttttttcgccgggtaccggcgggggcccttcgcttgcaacgcggataaacttttatgaaagggggt > 1:588864‑M1/1‑6 (MQ=255) gCCCCCGCCGGTACCCGGCGAAAAAACATTTTAAGCCAATGGGCAGGGGGCTATAAAATTTTATTTAAATGTTTTTTTATTTAAATTTTTa > 2:1635867/1‑91 (MQ=255) gCCCCCGCCGGTACCCGGCGAAAAAACATTTTAAGCCAATGGGCAGGGGGCTATAAAATTTTATTTAAATGTTTTTTTATTTAAATTTTTa > 2:3149086/1‑91 (MQ=255) cccccGCCGGTACCCGGCGAAAAAACATTTTAAGCCGATGGGCAgggggcccttcgcttgcaacgcggataaacttttatgaaagggggat < 1:2755941‑M2/91‑48 (MQ=255) cccccGCCGGTACCCGGCGAAAAAACATTTTAAGCCAATGGGCAGGGGGCTATAAAATTTTATTTAAATGTTTTTTTATTTATATTTTTAg > 2:2227678/1‑91 (MQ=255) cccccGCCGGTACCCGGCGAAAAAACATTTTAAGCCAATGGGCAGGGGGCTATAAAATTTTATTTAAATGTTTTTTTATTTAAATTTTTAg > 2:842989/1‑91 (MQ=255) cccccGCCGGTACCCGGCGAAAAAACATTTTAAGCCAATGGGCAGGGGGCTATAAAATTTTATTTAAATGTTTTTTTATTTAAATTTTTAg < 1:1007085/91‑1 (MQ=255) ccccGCCGGTACCCGGCGAAAAAACATTTTAAGCCGATGGGCAgggggcccttcgcttgcaacgcggataaacttttatgaaagggggata < 1:1397435‑M2/91‑49 (MQ=255) ccccGCCGGTACCCGGCGAAAAAACATTTTAAGCCAATGGGCAgggggcccttcgcttgcaacgcggataaacttttatgaaagggggtct < 1:3840554‑M2/91‑49 (MQ=255) ccccGCCGGTACCCGGCGAAAAAACATTTTAAGCCAATGGGCAGGGGGCTATAAAATTTTATTTAAATGTTTTTTTATTTAAATTTTTAGa > 2:2435125/1‑91 (MQ=255) ccccGCCGGTACCCGGCGAAAAAACATTTTAAGCCAATGGGCAGGGGGCTATAAAATTTTATTTAAATGTTTTTTTATTTAAATTTTTAGa > 2:2256/1‑91 (MQ=255) cccGCCGGTACCCGGCGAAAAAACATTTTAAGCCAATGGGCAGGGGGCTATAAAATTTTATTTAAATGTTTTTTTATTTAAATTTTTAGaa > 2:1668107/1‑91 (MQ=255) | TATATATTCTTTCAGCTGTTTTTTTGTTAATTTCATATAAAGACCCCCTTTCATAAAAGTTTATCCGCGTTGCAAGCGAAGGGCCCCCGCCGGTACCCGGCGAAAAAACATTTTAAGCCAATGGGCAGGGGGCTATAAAATTTTATTTAAATGTTTTTTTATTTAAATTTTTAGAACT > USA300TCH1516_ALE/1585972‑1586149 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |