| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | = 2057471 | 169 (0.890) | 26 (0.170) | 10/132 | NT | 14.5% | intergenic (+228/+64) | USA300HOU_RS10370/USA300HOU_RS10375 | hypothetical protein/hypothetical protein |
| ? | USA300TCH1516_ALE | = 2057483 | 167 (1.070) | intergenic (+240/+52) | USA300HOU_RS10370/USA300HOU_RS10375 | hypothetical protein/hypothetical protein | |||||
Only 100 of 293 total aligned reads displayed.
CCCAGCATATGCTTTATATAGCTTGCTGGGGGTTTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTCCTCTTCAAATAGTCTTTATTTAAATTGGATTATGTTATTGGATTTTCTTACCTACAAAAA > USA300TCH1516_ALE/2057381‑2057560 | ccAGCATATGCTTTATATAGCTTGCTGGGGGTTTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTa < 2:692460/91‑1 (MQ=255) gCATATGCTTTATATAGCTTGCTGGGGGTTTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTaaaa > 2:1862508/1‑91 (MQ=255) gCATATGCTTTATATAGCTTGCTGGGGGTTTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTaaaa > 1:2651090/1‑91 (MQ=255) cATATGCTTTATATAGCTTGCTGGGGGTTTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAAt > 2:2150051/1‑91 (MQ=255) tatGCTTTATATAGCTTGCTGGGGGTTTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTttgagta < 2:2502689‑M1/91‑8 (MQ=255) atGCTTTATATAGCTTGCTGGGGGTTTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTAc < 2:2264629/91‑1 (MQ=255) atGCTTTATATAGCTTGCTGGGGGTTTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTAc < 2:2066216/91‑1 (MQ=255) atGCTTTATATAGCTTGCTGGGGGTTTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTAc < 2:1561604/91‑1 (MQ=255) atGCTTTATATAGCTTGCTGGGGGTTTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTAc < 2:615413/91‑1 (MQ=255) tGCTTTATATAGCTTGCTGGGGGTTTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTttgagtaat > 2:1298191‑M1/1‑82 (MQ=255) tGCTTTATATAGCTTGCTGGGGGTTTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACt < 2:387073/91‑1 (MQ=255) cTTTATATAGCTTGCTGGGGGTTTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCa < 1:1504006/91‑1 (MQ=255) cTTTATATAGCTTGCTGGGGGTTTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCa < 2:3547810/91‑1 (MQ=255) gtatatagCTTGCTGGGGGTTTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAa > 2:2354465‑M2/2‑90 (MQ=255) tatataGCTTGCTGGGGGTTTCTCATACAGTATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTttgagtaattttac < 2:1159210‑M1/91‑15 (MQ=255) tatataGCTTGCTGGGGGTTTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTttgagtaattttac < 1:817737‑M1/91‑15 (MQ=255) tatataGCTAGCTGGGGGTTTCTCATACAATATGGATAGAGCATCTTGCATGTATACACAAATAGGCTATTAAAAGTAAAATTAATCAAAc > 2:2664331/1‑91 (MQ=255) atataGCTTGCTGGGGGTTTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTttgagtaattttact < 2:2711380‑M1/91‑16 (MQ=255) atataGCTTGCTGGGGGTTTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTttgagtaattttact < 1:3590419‑M1/91‑16 (MQ=255) atataGCTTGCTGGGGGTTTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTttgagtaattttact < 2:2764689‑M1/91‑16 (MQ=255) atataGCTTGCTGGGGGTTTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAact > 1:297552‑M2/1‑88 (MQ=255) atataGCTTGCTGGGGGTTTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGGAAAATTACTCAAact > 2:1739072‑M2/1‑88 (MQ=255) ataGCTTGCTGGGGGTTTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAacttt < 2:103380‑M2/91‑6 (MQ=255) ataGCTTGCTGGGGGTTTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAacttt < 1:2854331‑M2/91‑6 (MQ=255) taGCTTGCTGGGGGTTTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAactttg < 2:1393867‑M2/91‑7 (MQ=255) aGCTTGCTGGGGGTTTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAactttga < 1:212432‑M2/91‑8 (MQ=255) aGCTTGCTGGGGGTTTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAactttga > 1:2215924‑M2/1‑84 (MQ=255) aGCTTGCTGGGGGTTTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAactttga < 1:1325779‑M2/91‑8 (MQ=255) gCTTGCTGGGGGTTTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAactttgaa > 2:1115272‑M2/1‑83 (MQ=255) cTTGCTGGGGGTTTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTttgagtaattttactttgaat < 2:2754841‑M1/91‑22 (MQ=255) cTTGCTGGGGGTTTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTttgagtaattttactttgaat < 1:2640038‑M1/91‑22 (MQ=255) cTTGCTGGGGGTTTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAactttgaat < 1:1785942‑M2/91‑10 (MQ=255) gCTGGGGGTTTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTttgagtaattttactttgaatagc < 1:3237327‑M1/91‑25 (MQ=255) gCTGGGGGTTTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTttgagtaattttactttgaatagc < 1:978080‑M1/91‑25 (MQ=255) gCTGGGGGTTTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTttgagtaattttactttgaatagc < 1:1298191‑M1/91‑25 (MQ=255) tGGGGGTTTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAactttgaatagcct > 2:2937772‑M2/1‑77 (MQ=255) ggggTTTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCttt > 1:1462222/1‑91 (MQ=255) gggTTTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTc > 2:409086/1‑91 (MQ=255) ggTTTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTcc < 2:3673532/91‑1 (MQ=255) ggTTTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTcc > 2:1587651/1‑91 (MQ=255) gTTTCTCATACAATATGTATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTCct < 1:3330713/91‑1 (MQ=255) gTTTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTttgagtaattttactttgaatagcctatttg < 1:3272194‑M1/91‑32 (MQ=255) ttCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTCctct > 1:3572673/1‑91 (MQ=255) ttCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTCctct < 1:1776602/91‑1 (MQ=255) tctcATACAAGATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTCCTCtt < 2:348607/91‑1 (MQ=255) tcATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTCCTCTTCa < 1:207917/91‑1 (MQ=255) tcATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTCCTCTTCa < 2:3277875/91‑1 (MQ=255) cATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTCCTCTTCaa < 1:1962616/91‑1 (MQ=255) cATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTCCTCTTCaa < 1:3003622/91‑1 (MQ=255) cATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTCCTCTTCaa > 2:3095410/1‑91 (MQ=255) aTACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTCCTCTTCaaa < 2:3318712/91‑1 (MQ=255) tACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTCCTCTTCAAAt < 2:1198717/91‑1 (MQ=255) tACAATATGCATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTCCTCTTCAAAt < 1:3483629/91‑1 (MQ=255) atatGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAactttgaa < 1:3853774‑M2/68‑9 (MQ=255) atGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTCCTCTTCAAATAGTCtt > 1:551881/1‑91 (MQ=255) tGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTCCTCTTCAAATAGTCttt < 2:3534680/91‑1 (MQ=255) aTCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTCCTCTTCAAATAGTCtttatt < 1:896565/91‑1 (MQ=255) aTCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTCCTCTTCAAATAGTCtttatt > 2:1915966/1‑91 (MQ=255) cGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTCCTCTTCAAATAGTCtttattta < 1:700992/91‑1 (MQ=255) cGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTCCTCTTCAAATAGTCtttattta > 1:3815149/1‑91 (MQ=255) aGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTCCTCTTCAAATAGTCTTTATTTaaa > 2:133652/1‑91 (MQ=255) aTCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTCCTCTTCAAATAGTCTTTATTTaactcg > 2:1450942/1‑87 (MQ=255) aTCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTCCTCTTCAAATAGTCTTTATTTAAATTg < 2:1120671/91‑1 (MQ=255) aTCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTCCTCTTCAAATAGTCTTTATTTAAATTg > 1:585919/1‑91 (MQ=255) aTCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTCCTCTTCAAATAGTCTTTATTTAAATTg > 2:1653147/1‑91 (MQ=255) tCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTCCTCTTCAAATAGTCTTTATTTAAATTgg > 1:2618010/1‑91 (MQ=255) tCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTCCTCTTCAAATAGTCTTTATTTAAATTgg > 2:1268115/1‑91 (MQ=255) ttGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAactttgaatagcctatttgtttatacatgcaagatgctcgatccata < 2:541459‑M2/91‑48 (MQ=255) ttGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTCCTCTTCAAATAGTCTTTATTTAAATTGGAt < 1:2715942/91‑1 (MQ=255) tGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTCCTCTTCAAATAGTCTTTATTTAAATTGGAtt > 1:3596189/1‑91 (MQ=255) cATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTCCTCTTCAAATAGTCTTTATTTAAATTGGATTAt > 2:872639/1‑91 (MQ=255) ataAACAAATAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTCCTCTTCAAATAGTCTTTATTTAAATTGGATTATGTTAt < 2:2436202/91‑1 (MQ=255) ataAACAAATAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTCCTCTTCAAATAGTCTTTATTTAAATTGGATTATGTTAt < 2:1087555/91‑1 (MQ=255) ataAACAAATAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTCCTCTTCAAATAGTCTTTATTTAAATTGGATTATGTTAt > 2:1709802/1‑91 (MQ=255) taAACAAATAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTCCTCTTCAAATAGTCTTTATTTAAATTGGATTATGTTAtt < 1:103380/91‑1 (MQ=255) taAACAAATAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTCCTCTTCAAATAGTCTTTATTTAAATTGGATTATGTTAtt < 2:585919/91‑1 (MQ=255) taAACAAATAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTCCTCTTCAAATAGTCTTTATTTAAATTGGATTATGTTAtt > 1:788243/1‑91 (MQ=255) aaCAAATAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTCCTCTTCAAATAGTCTTTATTTAAATTGGATTATGTTATTgg > 2:2589636/1‑91 (MQ=255) aaCAAATAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTCCTCTTCAAATAGTCTTTATTTAAATTGGATTATGTTATTgg > 1:1117756/1‑91 (MQ=255) aaCAAATAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTCCTCTTCAAATAGTCTTTATTTAAATTGGATTATGTTATTgg > 1:2792485/1‑91 (MQ=255) aCAAATAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTCCTCTTCAAATAGTCTTTATTTAAATTGGATTATGTTATTGGa > 1:1272605/1‑91 (MQ=255) aaTAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTCCTCTTCAAATAGTCTTTATTTAAATTGGATTATGTTATTGGAttt > 1:2304064/1‑91 (MQ=255) tAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTATCCTCTTCAAATAGTCTTTATTTAAATTGGATTATGTTATTGGATTTTc > 1:3369264/1‑91 (MQ=255) aGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTCCTCTTCAAATAGTCTTTATTTACATTGGATTATGTTATTGGATTTTCt > 1:2172768/1‑91 (MQ=255) ggCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTCCTCTTCAAATAGTCTTTATTTAAATTGGATTATGTTATTGGATTTTCtt > 2:3356724/1‑91 (MQ=255) gCTATTCAAAGTttgagtaattttactttgaatagcctatttgtttatacatgcaagatgctcgatccatattgtatgagaaacccccagc < 1:1662724‑M1/91‑80 (MQ=255) gCTATTCAAAGTAAAATTACTCAAactttgaatagcctatttgtttatacatgcaagatgctcgatccatattgtatgagaaacccccagc < 1:979707‑M2/91‑68 (MQ=255) gCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTCCTCTTGAAATAGTCTTTATTTAAATTGGATTATGTTATTGGAttttatca > 1:3074349/1‑87 (MQ=255) gCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTCTCCTCTTCAAATAGTCTTTATTTAAATTGGATTATGTTATTGGATTTTCTTa > 1:192353/1‑91 (MQ=255) aTTCAAAGTAAAATTACTCAAactttgaatagcctatttgtttatacatgcaagatgctcgatccatattgtatgagaaacccccagcaag < 2:2755004‑M2/91‑71 (MQ=255) ttCAAAGTttgagtaattttactttgaatagcctatttgtttatacatgcaagatgctcgatccatattgtatgagaaacccccagcaagc > 1:1483379‑M1/1‑8 (MQ=255) ttCAAAGTttgagtaattttactttgaatagcctatttgtttatacatgcaagatgctcgatccatat > 2:3853774‑M1/1‑8 (MQ=255) ttCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTCCTCTTCAAATAGTCTTTATTTAAATTGGATTATGTTATTGGATTTTCTTACCTa > 2:819195/1‑91 (MQ=255) tCAAAGTttgagtaattttactttgaatagcctatttgtttatacatgcaagatgctcgatccatattgtatgagaaacccccagcaagct > 1:2215617‑M1/1‑7 (MQ=255) aaaGTttgagtaattttactttgaatagcctatttgtttatacatgcaagatgctcgatccatattgtatgagaaacccccagcaagctat < 1:2853354‑M1/91‑87 (MQ=255) aaGTttgagtaattttactttgaatagcctatttgtttatacatgcaagatgctcgatccatattgtatgagaaacccccagcaagctata > 1:1401237‑M1/1‑4 (MQ=255) aaGTttgagtaattttactttgaatagcctatttgtttatacatgcaagatgctcgatccatattgtatgagaaacccccagcaagctata < 1:374378‑M1/91‑88 (MQ=255) aaGTAAACTTACTCAAACTTTGAATAGCCTTTCCTCTTCAAATAGTCTTTATTTAAATTGGATTATGTTATTGGATTTTCTTACCTACaaa < 2:3457764/91‑1 (MQ=255) aGTAAAATTACTCAAactttgaatagcctatttgtttatacatgcaagatgctcgatccatattgtatgagaaacccccagcaagctatat < 2:3749528‑M2/91‑77 (MQ=255) gTAAAATTACTCAAACTTTGAATAGCCTTTCCTCTTCAAATAGTCTTTATTTAAATTGGATTATGTTATTGGATTTTCTTACCTACaaaaa < 1:2400884/91‑1 (MQ=255) | CCCAGCATATGCTTTATATAGCTTGCTGGGGGTTTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTCCTCTTCAAATAGTCTTTATTTAAATTGGATTATGTTATTGGATTTTCTTACCTACAAAAA > USA300TCH1516_ALE/2057381‑2057560 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |