| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | = 2252663 | 137 (0.720) | 13 (0.070) | 7/148 | NT | 8.4% | intergenic (+99/+53) | luxS/USA300HOU_RS11525 | S‑ribosylhomocysteine lyase/hypothetical protein |
| ? | USA300TCH1516_ALE | = 2252697 | 158 (0.900) | intergenic (+133/+19) | luxS/USA300HOU_RS11525 | S‑ribosylhomocysteine lyase/hypothetical protein | |||||
Only 100 of 312 total aligned reads displayed.
CAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAACTGCA > USA300TCH1516_ALE/2252573‑2252753 | caatcaaGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCG > 2:440080‑M1/1‑91 (MQ=255) aatcaaGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGa > 1:2984952/1‑91 (MQ=255) atcaaGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCACAGTCAAAAAATCGca > 2:3314731‑M1/1‑89 (MQ=255) atcaaGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGaa < 1:707503/91‑1 (MQ=255) atcaaGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGaa < 1:904481/91‑1 (MQ=255) tAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGa > 2:450700/1‑91 (MQ=255) tAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGa < 1:327733/91‑1 (MQ=255) aaTCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGaa > 1:1061717/1‑91 (MQ=255) aaTCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGaa > 1:2799433/1‑91 (MQ=255) aTCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGaaa > 1:1337061/1‑91 (MQ=255) aTCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGaaa < 1:1355525/91‑1 (MQ=255) aGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAg < 2:2379681/91‑1 (MQ=255) aGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAg < 2:1017170/91‑1 (MQ=255) aGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAg < 2:648650/91‑1 (MQ=255) gAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGt < 1:2101667/91‑1 (MQ=255) AAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTa < 2:154604‑M1/91‑1 (MQ=255) AAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTa < 1:3177398‑M1/91‑1 (MQ=255) AAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTaa < 1:1590717‑M1/91‑1 (MQ=255) aagcagttggacaatggcgattgtaaaatcattgttcgactgcttttTATTATGCTTCAAAGTCAAAAAATCGCACAACTGAAAAAGTaaa > 2:1111111‑M2/48‑91 (MQ=255) AGCAGTCGAACAATGATTTTACAATCGCCATTGTTCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTaaaa < 2:3525448‑M1/91‑1 (MQ=255) AGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGACAAAAAATCGAACAAATGAAAAAGTaaaa < 1:1433800‑M1/91‑1 (MQ=255) gcagttggacaatggcgattgtaaaatcattgttcgactgcttttTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAAt > 2:3392363‑M2/46‑91 (MQ=255) GCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAAt < 2:3730916‑M1/91‑1 (MQ=255) GCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAAt < 1:851312‑M1/91‑1 (MQ=255) GCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAAt < 2:175593‑M1/91‑1 (MQ=255) GCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAAt < 2:2206697‑M1/91‑1 (MQ=255) CAGTCGAACAATGATTTTACAATCGCCATTGTTCAACTGCTTTTTATTCTGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATc < 2:3804063‑M1/91‑1 (MQ=255) CAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATc < 1:3432853‑M1/91‑1 (MQ=255) AGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCt < 2:1326825‑M1/91‑1 (MQ=255) GTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCtt > 2:1448285‑M1/1‑91 (MQ=255) GTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCtt < 2:1132907‑M1/91‑1 (MQ=255) TCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCttt > 2:2296492‑M1/1‑91 (MQ=255) TCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCttt < 1:3144529‑M1/91‑1 (MQ=255) TCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCttt > 2:1385679‑M1/1‑91 (MQ=255) tggacaatggcgattgtaaaatcattgttcgactgcttttTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTa > 1:3391431‑M2/41‑91 (MQ=255) ggacaatggcgattgtaaaatcattgttcgactgcttttTATTATGCTTCAAAGTCAAAAAATCAAACAAATGAAAAAGTAAAATCTTTaa > 1:14578‑M2/40‑91 (MQ=255) gAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTaa < 2:564213/91‑1 (MQ=255) gAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTaa < 1:118656/91‑1 (MQ=255) gacaatggcgattgtaaaatcattgttcgactgcttttTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAAc > 2:1573787‑M2/39‑91 (MQ=255) aCAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACa > 2:3076391/1‑91 (MQ=255) aaTGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACAtt < 2:2867351/91‑1 (MQ=255) tGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTg < 1:2329691/91‑1 (MQ=255) ttttACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGgacaaatgttaaagattttactttttcatttgttc < 1:1043972‑M1/91‑36 (MQ=255) ttttACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCc > 2:3666537‑M2/1‑90 (MQ=255) ttACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGgacaaatgttaaagattttactttttcatttgttcga < 2:900384‑M1/91‑38 (MQ=255) ttACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCcga > 1:2551895‑M2/1‑88 (MQ=255) tACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCcgat < 2:2560684‑M2/91‑5 (MQ=255) aCAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGgacaaatgttaaagattttactttttcatttgttcgatt < 2:1953469‑M1/91‑40 (MQ=255) aaTCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGattta > 2:3248058/1‑91 (MQ=255) tCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGatttatt < 1:575098/91‑1 (MQ=255) tCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGatttatt < 2:2451263/91‑1 (MQ=255) tCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGatttatt < 2:205883/91‑1 (MQ=255) tCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGatttatt > 1:1000446/1‑91 (MQ=255) ttGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTgagag > 2:3845626/1‑90 (MQ=255) tGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAAc < 1:1941536/91‑1 (MQ=255) tGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAAc > 1:3760107/1‑91 (MQ=255) tCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCa < 1:610812/91‑1 (MQ=255) ccAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCAc < 2:1214911/91‑1 (MQ=255) ccAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCAc < 1:3544111/91‑1 (MQ=255) ccAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCAc < 1:1157184/91‑1 (MQ=255) cAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACt < 1:2171554/91‑1 (MQ=255) aaCTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACta > 1:1721124/1‑91 (MQ=255) aaCTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACta < 2:2749272/91‑1 (MQ=255) aaCTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACta < 2:1988452/91‑1 (MQ=255) ctgcttttTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACtata < 1:307643‑M2/83‑1 (MQ=255) ctgcttttTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTCAACATTTGTCCGATTTATTTGAGAACCACtata > 1:182573‑M2/9‑91 (MQ=255) tgcttttTATTATGCTTCAAAGTCACAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATaa < 1:3627807‑M2/84‑1 (MQ=255) cttttTATTATGCTTCAAAGTCAAAAAATCAAAAAAAAAAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAAtt < 2:2683922‑M2/86‑1 (MQ=255) cttttTATTATGCTTCAAAGTCAAAAAAGCGAAAAAAAAAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAAtt < 2:3622163‑M2/86‑1 (MQ=255) tttTATTATGCTTCAAAGTCAAAAAATCGAACAAATTAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCActataaaatt < 2:3058766‑M2/88‑5 (MQ=255) ttTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCt < 1:1327333‑M2/89‑1 (MQ=255) ttTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCt < 1:137796‑M2/89‑1 (MQ=255) tTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCtt < 1:3017503‑M2/90‑1 (MQ=255) tTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCtt > 1:2960482‑M2/2‑91 (MQ=255) ttatGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAAt < 2:676873/91‑1 (MQ=255) tGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAg < 1:1053404/91‑1 (MQ=255) gCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGt > 2:905689/1‑91 (MQ=255) aaGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCAtt < 1:1870528/91‑1 (MQ=255) aaGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCAtt < 2:78023/91‑1 (MQ=255) aGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTa < 2:168884/91‑1 (MQ=255) cAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAaca < 1:3196161/91‑1 (MQ=255) cAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAaca > 2:213477/1‑91 (MQ=255) aaaaaaTCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCcgattttttgactttgaagcataataaaaagcagttggacaatggcga < 1:1494226‑M2/91‑49 (MQ=255) aaaaaaTCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAacac < 2:3177398/91‑1 (MQ=255) aaaaaaTCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAacac > 2:2981637/1‑91 (MQ=255) aaaaaaTCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAacac > 1:2657437/1‑91 (MQ=255) aaaaTCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGa < 1:818353/91‑1 (MQ=255) aaaaTCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGa < 1:3819880/91‑1 (MQ=255) aaaTCGgacaaatgttaaagattttactttttcatttgttcgattttttgactttgaagcataataaaaagcagttggacaatggcgattg > 1:2473640‑M1/1‑6 (MQ=255) aaaTCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGaa > 2:396724/1‑91 (MQ=255) aaTCGgacaaatgttaaagattttactttttcatttgttcga > 1:3436987‑M1/1‑5 (MQ=255) aaTCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCcgattttttgactttgaagcataataaaaagcagttggacaatggcgattgt < 1:3502146‑M2/91‑53 (MQ=255) aaTCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAAc < 1:461661/91‑1 (MQ=255) aTCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCcgattttttaactttgaagcataataaaaagcagttggacaatggcgattgta < 1:3865864‑M2/91‑54 (MQ=255) aTCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAACt > 2:590332/1‑91 (MQ=255) tCGgacaaatgttaaagattttactttttcatttgttcgattttttgactttgaagcataataaaaagcagttggacaatggcgattgaac < 2:2858146‑M1/91‑89 (MQ=255) tCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCcgattttttgactttgaagcataataaaaagcagttggacaatggcgattgtaa < 2:901398‑M2/91‑55 (MQ=255) tCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCcgatt < 2:3436987‑M2/42‑6 (MQ=255) cGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAACTGc < 2:188586/91‑1 (MQ=255) ggacaaatgttaaagattttactttttcatttgttcgattttttgactttgaagcataataaaaagcagttggacaatggcgattgtaaaa > 1:2839760‑M1/1‑1 (MQ=255) | CAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAACTGCA > USA300TCH1516_ALE/2252573‑2252753 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |