| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | 2377221 = | 166 (0.870) | 30 (0.180) | 14/142 | NT | 18.1% | intergenic (+124/‑57) | USA300HOU_RS12205/glcU_2 | hypothetical protein/putative glucose uptake protein GlcU |
| ? | USA300TCH1516_ALE | 2377253 = | 124 (0.730) | intergenic (+156/‑25) | USA300HOU_RS12205/glcU_2 | hypothetical protein/putative glucose uptake protein GlcU | |||||
Only 100 of 261 total aligned reads displayed.
GCATGTATTGTGGGTTTTTCTACTTTTTGTAAATATTGAAAATTATAAGTAGTTGTTTTTTACTATTAGGGCAGAATGCTTTACAATAACATGCAAGTGTCAATTAAGGGGAGCACTTGCATAAATAGTATAGGAGAGTGAGTAGTCTTGCAATTTCTTGATTTCTTAATCGCACTTTTAC > USA300TCH1516_ALE/2377131‑2377311 | gCATGTATTGTGGGTTTTTCTACTTTTTGTAAATATTGAAAATTATAAGTAGTTGTTTTTTACTATTAGGGCAGAATGCTTTACAATAACa < 2:2908343/91‑1 (MQ=255)gCATGTATTGTGGGTTTTTCTACTTTTTGTAAATATTGAAAATTATAAGTAGTTGTTTTTTACTATTAGGGCAGAATGCTTTACAATAACa < 2:1814893/91‑1 (MQ=255) taagaacgacacttccccagaataaagctggtaaaagtgcgattaagaaatcaagaaattgcaagactactcactctcctatactatttAt < 2:2690904‑M1/2‑1 (MQ=255) taagaacgacacttccccagaataaagcaggtaaaagtgcgattaagaaatcaagaaattgcaagactactcactctcctatactatttAt > 2:151364‑M1/90‑91 (MQ=255) cATGTATTGTGGGTTTTTCTACTTTTTGTAAATATTGAAAATTATAAGTAGTTGTTTTTTACTATTAGGGCAGAATGCTTTACAATAACAt > 2:1173556/1‑91 (MQ=255) cATGTATTGTGGGTTTTTCTACTTTTTGTAAATATTGAAAATTATAAGTAGTTGTTTTTTACTATTAGGGCAGAATGCTTTACAATAACAt > 2:1173587/1‑91 (MQ=255) aagaacgacacttccccagaataaagcaggtaaaagtgcgattaagaaatcaagaaattgcaagactactcactctcctatactatttATg < 2:2296018‑M1/3‑1 (MQ=255) aagaacgacacttccccagaataaagcaggtaaaagtgcgattaagaaatcaagaaattgcaagactactcactctcctatactatttATg > 1:402023‑M1/89‑91 (MQ=255) aagaacgacacttccccagaataaagcaggtaaaagtgcgattaagaaatcaagaaattgcaagactactcactctcctatactatttATg > 1:2445357‑M1/89‑91 (MQ=255) aTGTATTGTGGGTTTTTCTACTTTTTGTAAATATTGAAAATTATAAGTAGTTGTTTTTTACTATTAGGGCAGAATGCTTTACAATAACATg > 2:1471631/1‑91 (MQ=255) aTGTATTGTGGGTTTTTCTACTTTTTGTAAATATTGAAAATTATAAGTAGTTGTTTTTTACTATTAGGGCAGAATGCTTTACAATAACATg > 1:2310778/1‑91 (MQ=255) tGTATTGTGGGTTTTTCTACTTTTTGTAAATATTGAAAATTATAAGTAGTTGTTTTTTACTATTAGGGCAGAATGCTTTACAATAACATGc > 1:1383702/1‑91 (MQ=255) agaacgacacttccccagaataaagcaggtaaaagtgcgattaagaaatcaagaaattgcaagactactcactctcctatactatttATGc > 2:219746‑M1/88‑91 (MQ=255) agaacgacacttccccagaataaagcaggtaaaagtgcgattaagaaatcaagaaattgcaagactactcactctcctatactatttATGc < 2:1085290‑M1/4‑1 (MQ=255) agaacgacacttccccagaataaagcaggtaaaagtgcgattaagaaatcaagaaattgcaagactactcactctcctatactatttATGc < 1:1173574‑M1/4‑1 (MQ=255) gaacgacacttccccagaataaagcaggtaaaagtgcgattaagaaatcaagaaattgcaagactactcactctcctatactatttATGCa > 2:58719‑M1/87‑91 (MQ=255) aacgacacttccccagaataaagcaggtaaaagtgcgattaagaaatcaagaaattgcaagactactcactctcctatactatttATGCaa < 2:348078‑M1/6‑1 (MQ=255) aacgacacttccccagaataaagcaggtaaaagtgcgattaagaaatcaagaaattgcaagactactcactctcctatactatttATGCaa > 1:379688‑M1/86‑91 (MQ=255) aTTGTGGGTTTTTCTACTTTTTGTAAATATTGAAAATTATAAGTAGTTGTTTTTTACTATTAGGGCAGAATGCTTTACAATAACATGCAAg > 2:399708/1‑91 (MQ=255) cgacacttccccagaataaagcaggtaaaagtgcgattaagaaatcaagaaattgcaagactactcactctcctatactatttATGCAAgt < 1:530024‑M1/8‑1 (MQ=255) gacacttccccagaataaagcaggtaaaagtgcgattaagaaatcaagaaattgcaagactactcactctcctatactatttATGCAAgtg < 1:1783456‑M1/9‑1 (MQ=255) gacacttccccagaataaagcaggtaaaagtgcgattaagaaatcaagaaattgcaagactactcactctcctatactatttATGCAAgtg < 2:1750763‑M1/9‑1 (MQ=255) gtgGGTTTTTCTACTTTTTGTAAATATTGAAAATTATAAGTAGTTGTTTTTTACTATTAGGGCAGAATGCTTTACAATAACATGCAAgtgt < 2:183983/91‑1 (MQ=255) ttttCTACTTTTTGTAAATATTGAAAATTATAAGTAGTTGTTTTTTACTATTAGGGCAGAATGCTTTACAATAACATGCAAGTGTCAATTa > 1:2130064/1‑91 (MQ=255) ttCTACTTTTTGTAAATATTGAAAAATATAAGTAGTTGTTTTTTACTATTAGGGCAGAATGCTTTACAATAACATGCAAGTGTCAATTAAg < 1:3606949/91‑1 (MQ=255) tCTACTTTTTGTAAATATTGAAAATTATAAGTAGTTGTTTTTTACTATTAGGGCAGAATGCTTTACAATAACATGCAAGTGTCAATTAAgg < 2:1567517/91‑1 (MQ=255) tCTACTTTTTGTAAATATTGAAAATTATAAGTAGTTGTTTTTTACTATTAGGGCAGAATGCTTTACAATAACATGCAAGTGTCAATTAAgg < 2:1290229/91‑1 (MQ=255) tCTACTTTTTGTAAATATTGAAAATTATAAGTAGTTGTTTTTTACTATTAGGGCAGAATGCTTTACAATAACATGCAAGTGTCAATTAAgg > 2:1316710/1‑91 (MQ=255) tCTACTTTTTGTAAATATTGAAAATTATAAGTAGTTGTTTTTTACTATTAGGGCAGAATGCTTTACAATAACATGCAAGTGTCAATTAAgg > 2:2318416/1‑91 (MQ=255) tCTACTTTTTGTAAATATTGAAAATTATAAGTAGTTGTTTTTTACTATTAGGGCAGAATGCTTTACAATAACATGCAAGTGTCAATTAAgg < 2:2235148/91‑1 (MQ=255) cTACTTTTTGTACATATTGAAAATTATAAGTAGTTGTTTTTTACTATTAGGGCAGAATGCTTTACAATAACATGCAAGTGTCAATTAAggg > 1:2994600/1‑91 (MQ=255) cTACTTTTTGTAAATATTGAAAATTATAAGTAGTTGTTTTTTACTATTAGGGCAGAATGCTTTACAATAACATGCAAGTGTCAATTAAggg > 1:3368618/1‑91 (MQ=255) tACTTTTTGTAAATATTGAAAATTATAAGTAGTTGTTTTTTACTATTAGGGCAGAATGCTTTACAATAACATGCAAGTGTCAATTAAgggg < 1:2912407/91‑1 (MQ=255) tACTTTTTGTAAATATTGAAAATTATAAGTAGTTGTTTTTTACTATTAGGGCAGAATGCTTTACAATAACATGCAAGTGTCAATTAAgggg < 2:1925315/91‑1 (MQ=255) tACTTTTTGTAAATATTGAAAATTATAAGTAGTTGTTTTTTACTATTAGGGCAGAATGCTTTACAATAACATGCAAGTGTCAATTAAgggg < 1:464908/91‑1 (MQ=255) gaataaagcaggtaaaagtgcgattaagaaatcaagaaattgcaagactactcactctcctatactatttATGCAAGTGTCAATTAAgggg > 1:2648968‑M1/71‑91 (MQ=255) aataaagcaggtaaaagtgcgattaagaaatcaagaaattgcaagactactcactctcctatactatttATGCAAGTGTCAATTAAGGGGa > 2:2421218‑M1/70‑91 (MQ=255) aataaagcaggtaaaagtgcgattaagaaatcaagaaattgcaagactactcactctcctatactatttATGCAAGTGTCAATTAAGGGGa > 2:124604‑M1/70‑91 (MQ=255) aCTTTTTGTAAATATTGAAAATTATAAGTAGTTGTTTTTTATTATTAGGGCAGAATGCTTTACAATAACATGCAAGTGTCAATTAAGGGGa > 2:2566672/1‑91 (MQ=255) cTTTTTGTAAATATTGAAAATTATAAGTAGTTGTTTTTTACTATTAGGGCAGAATGCTTTACAATAACATGCAAGTGTCAATTAAGGGGAg > 2:3252133/1‑91 (MQ=255) ataaagcaggtaaaagtgcgattaagaaatcaagaaattgcaagactactcactctcctatactatttATGCAAGTGTCAATTAAGGGGAg > 1:852164‑M1/69‑91 (MQ=255) taaagcaggtaaaagtgcgattaagaaatcaagaaattgcaagactactcactctcctatactatttATGCAAGTGTCAATTAAGGGGAGc > 1:1963161‑M1/68‑91 (MQ=255) taaagcaggtaaaagtgcgattaagaaatcaagaaattgcaagactactcactctcctatactatttATGCAAGTGTCAATTAAGGGGAGc > 2:2036389‑M1/68‑91 (MQ=255) tttGTAAATATTGAAAATTATAAGTAGTTGTTTTTTACTATTAGGGCAGAATGCTTTACAATAACATGCAAGTGTCAATTAAGGGGAGCAc < 2:2275310/91‑1 (MQ=255) tttGTAAATATTGAAAATTATAAGTAGTTGTTTTTTACTATTAGAGCAGAATGCCTTAGAATAACATGCCAGTGTCAATTAAGCGGAGCAc > 1:3190971/1‑91 (MQ=255) ttGTAAATATTGAAAATTATAAGTAGTTGTTTTTTACTATTAGGGCAGAATGCTTTACAATAACATGCAAGTGTCAATTAAGGGGAGCACt > 2:1690160/1‑91 (MQ=255) tGTAAATATTGAAAATTATAAGTAGTTGTTTTTTACTCTTAGGGCAGAATGCTTTACAATAACATGCAAGTGTCAATTAAGGGGAGCACtt > 1:1657536/1‑91 (MQ=255) tGTAAATATTGAAAATTATAAGTAGTTGTTTTTTACTATTAGGGCAGAATGCTTTACAATAACATGCAAGTGTCAATTAAGGGGAGCACtt > 1:2765603/1‑91 (MQ=255) gcaggtaaaagtgcgattaagaaatcaagaaattgcaagactactcactctcctatactatttATGCAAGTGTCAATTAAGGGGAGCACtt > 2:2183517‑M1/64‑91 (MQ=255) caggtaaaagtgcgattaagaaatcaagaaattgcaagactactcactctcctatactatttATGCAAGTGTCAATTAAGGGGAGCACTTg > 1:3812482‑M1/63‑91 (MQ=255) tAAATATTGAAAATTATAAGTAGTTGTTTTTTACTATTAGGGCAGAATGCTTTACAATAACATGCAAGTGTCAATTAAgggg > 1:893390/1‑82 (MQ=255) tAAATATTGAAAATTATAAGTAGTTGTTTTTTACTATTAGGGCAGAATGCTTTACAATAACATGCAAGTGTCAATTAAGGGGAGCACTTGc > 1:2587034/1‑91 (MQ=255) aggtaaaagtgcgattaagaaatcaagaaattgcaagactactcactctcctatactatttATGCAAGTGTCAATTAAGGGGAGCACTTGc > 1:3559272‑M1/62‑91 (MQ=255) ggtaaaagtgcgattaagaaatcaagaaattgcaagactactcactctcctatactatttATGCAAGTGTCAATTAAGGGGAGCACTTGCa > 1:710385‑M1/61‑91 (MQ=255) aaaTATTGAAAATTATAAGTAGTTGTTTTTTACTATTAGGGCAGAATGCTTTACAATAACATGCAAGTGTCAATTAAGGGGAGCACTTGCa > 1:1930184/1‑91 (MQ=255) taaaagtgcgattaagaaatcaagaaattgcaagactactcactctcctatactatttATGCAAGTGTCAATTAAGGGGAGCACTTGCATa > 1:1587481‑M1/59‑91 (MQ=255) tatTGAAAATTATAAGTAGTTGTTTTTTACTATTAGGGCAGAATGCTTTACAATAACATGCAAGTGTCAATTAAGGGGAGCACTTGCATaa < 1:604534/91‑1 (MQ=255) aaaagtgcgattaagaaatcaagaaattgcaagactactcactctcctatactatttATGCAAGTGTCAATTAAGGGGAGCACTTGCATaa > 2:2022026‑M1/58‑91 (MQ=255) gAAAATTATAAGTAGTTGTTTTTTACTATTAGGGCAGAATGCTTTACAATAACATGCAAGTGTCAATTAAGGGGAGCACTTGCATAAATAg < 1:338484/91‑1 (MQ=255) gAAAATTATAAGTAGTTGTTTTTTACTATTAGGGCAGAATGCTTTACAATAACATGCAAGTGTCAATTAAGGGGAGCACTTGCATAAATAg > 1:2039625/1‑91 (MQ=255) aaaTTATAAGTAGTTGTTTTTTACTATTAGGGCAGAATGCTTTACAATAACATGCAAGTGTCAATTAAGGGGAGCACTTGCATAAATAGta < 2:923007/91‑1 (MQ=255) aaTTATAAGTAGTTGTTTTTTACTATTAGGGCAGAATGCTTTACAATAACATGCAAGTGTCAATTAAGGGGAGCACTTGCATAAATAGtat < 2:3324574/91‑1 (MQ=255) aTTATAAGTAGTTGTTTTTTACTATTAGGGCAGAATGCTTTACAATAACATGCAAGTGTCAATTAAGGGGAGCACTTGCATAAATAGtata < 2:1422943/91‑1 (MQ=255) ttATAAGTAGTTGTTTTTTACTATTAGGGCAGAATGCTTTACAATAACATGCAAGTGTCAATTAAGGGGAGCACTTGCATAAATAGTATAg < 2:3674179/91‑1 (MQ=255) tataAGTAGTTGTTTTTTACTATTAGGGCAGAATGCTTTACAATAACATGCAAGTGTCAATTAAGGGGAGCACTTGCATAAATAGTATAgg > 1:3161275/1‑91 (MQ=255) aaGTAGTTGTTTTTTACTATTAGGGCAGAATGCTTTACAATAACATGCAAGTGTCAATTAAGGGGAGCACTTGCATAAATAGTATAGgaga < 1:2267844/91‑1 (MQ=255) aaGTAGTTGTTTTTTACTATTAGGGCAGAATGCTTTACAATAACATGCAAGTGTCAATTAAGGGGAGCACTTGCATAAATAGTATAGgaga < 1:1505146/91‑1 (MQ=255) agtagtTGTTTTTTACTATTAGGGCAGAATGCTTTACAATAACATGCAAGTGTCAATTAAGGGGAGCACTTGCATAAATAGTATAGGagag > 1:2200187/1‑91 (MQ=255) agtagtTGTTTTTTACTATTAGGGCAGAATGCTTTACAATAACATGCAAGTGTCAATTAAGGGGAGCACTTGCATAAATAGTATAGGagag > 2:778473/1‑91 (MQ=255) gtagtTGTTTTTTACTATTAGGGCAGAATGCTTTACAATAACATGCAAGTGTCAATTAAGGGGAGCACTTGCATAAATAGTATAGGAgagt > 2:719624/1‑91 (MQ=255) gtagtTGTTTTTTACTATTAGGGCAGAATGCTTTACAATAACATGCAAGTGTCAATTAAGGGGAGCACTTGCATAAATAGTATAGGAgagt > 2:2604491/1‑91 (MQ=255) gtagtTGTTTTTTACTATTAGGGCAGAATGCTTTACAATAACATGCAAGTGTCAATTAAGGGGAGCACTTGCATAAATAGTATAGGAgagt < 1:579489/91‑1 (MQ=255) tagtTGTTTTTTACTATTAGGGCAGAATGCTTTACAATAACATGCAAGTGTCAATTAAGGGGAGCACTTGCATAAATAGTATAGGAgagtg < 1:1149377/91‑1 (MQ=255) agtTGTTTTTTACTATTAGGGCAGAATGCTTTACAATAACATGCAAGTGTCAATTAAGGGGAGCACTTGCATAAATAGTATAGGAgagtga < 2:1725133/91‑1 (MQ=255) gttTTTTACTATTATGTCAGAATGCTTTACAATAACATGCAAGTGTCAATTAAGGGGAGCACTTGCATAAATAGTATAGGAGAGTGagtag > 2:1630326/1‑91 (MQ=255) gttTTTTACTATTAGGGCAGAATGCTTTACAATAACATGCAAGTGTCAATTAAGGGGAGCACTTGCATAAATAGTATAGGAGAGTGagtag < 2:2383364/91‑1 (MQ=255) ttttACTATTAGGGCAGAATGCTTTACAATAACATGCAAGTGTCAATTAAGGGGAGCACTTGCATAAATAGTATAGGAGAGTGAGTAGTCt > 1:914837/1‑91 (MQ=255) tACTATTAGGGCAGAATGCTTTACAATAACATGCAAGTGTCAATTAAGGGGAGCACTTGCATAAATAGTATAGGAGAGTGAGTAGTCTTGc > 2:463626/1‑91 (MQ=255) aCTATTAGGGCAGAATGCTTTACAATAACATGCAAGTGTCAATTAAGGGGAGCACTTGCATAAATAGTATAGGAGAGTGAGTAGTCTTGCa > 2:45831/1‑91 (MQ=255) tATTAGGGCAGAATGCTTTACAATAACATGCAAGTGTCAATTAAGGGGAGCACTTGCATAAATAGTATAGGAGAGTGAGTAGTCTTGCAAt > 1:665400/1‑91 (MQ=255) aTTAGGGCAGAATGCTTTACAATAACATGCAAGTGTCAATTAAGGGGAGCACTTGCATAAATAGTATAGGAGAGTGAGTAGTCTTGCAAtt > 1:183484/1‑91 (MQ=255) ttAGGGCAGAATGCTTTACAATAACATGCAAGTGTCAATTAAGGGGAGCACTTGCATAAATAGTATAGGAGAGTGAGTAGTCTTGCAAttt < 2:422146/91‑1 (MQ=255) ttAGGGCAGAATGCTTTACAATAACATGCAAGTGTCAATTAAGGGGAGCACTTGCATAAATAGTATAGGAGAGTGAGTAGTCTTGCAAttt < 1:2842916/91‑1 (MQ=255) tAGGGCAGAATGCTTTACAATAACATGCAAGTGTCAATTAAGGGGAGCACTTGCATAAATAGTATAGGAGAGTGAGTAGTCTTGCAATTTc > 1:1215583/1‑91 (MQ=255) tAGGGCAGAATGCTTTACAATAACATGCAAGTGTCAATTAAGGGGAGCACTTGCATAAATAGTATAGGAGAGTGAGTAGTCTTGCAATTTc < 2:3184109/91‑1 (MQ=255) tAGGGCAGAATGATTTACAATAACATGCAAGTGTCAATTAAGGGGAGCACTTGCATAAATAGTATAGGAGAGTGAGTAGTCTTGCAATTTc > 1:2978260/1‑91 (MQ=255) aGAATGCTTTACAATAACATGCAAGTGTCAATTAAGGGGAGCACTTGCATAAATAGTATAGGAGAGTGAGTAGTCTTGCAATTTCTTGAtt > 2:3001126/1‑91 (MQ=255) aaTGCTTTACAATAACATGCAAGTGTCAATTAAGGGGAGCACTTGCATAAATAGTATAGGAGAGTGAGTAGTCTTGCAATTTCTTGATTTc > 2:1019246/1‑91 (MQ=255) gCTTTACAATAACATGCAAGTGTCAATTAAGGGGAGCACTTGCATAAATAGTATAGGAGAGTGAGTAGTCTTGCAATTTCTTGATTTCTTa > 1:2695374/1‑91 (MQ=255) gCTTTACAATAACATGCAAGTGTCAATTAAGGGGAGCACTTGCATAAATAGTATAGGAGAGTGAGTAGTCTTGCAATTTCTTGATTTCTTa > 1:989866/1‑91 (MQ=255) cTTTACAATAACATGCAAGTGTCAATTAAGGGGAGCACTTGCATAAATAGTATAGGAGAGTGAGTAGTCTTGCAATTTCTTGATTTCTTaa > 1:3258402/1‑91 (MQ=255) cTTTACAATAACATGCAAGTGTCAATTAAGGGGAGCACTTGCATAAATAGTATAGGAGAGTGAGTAGTCTTGCAATTTCGTGATTTCTTaa > 1:3520212/1‑91 (MQ=255) ttACAATAACATGCAAGTGTCAATTAAGGGGAGCACTTGCATAAATAGTATAGGAGAGTGAGTAGTCTTGCAATTTCTTGATTTCTTAATc > 1:2408314/1‑91 (MQ=255) ttACAATAACATGCAAGTGTCAATTAAGGGGAGCACTTGCATAAATAGTATAGGAGAGTGAGTAGTCTTGCAATTTCTTGATTTCTTAATc > 2:2631405/1‑91 (MQ=255) tAACATGCAAGTGTCAATTAAGGGGAGCACTTGCATAAATAGTATAGGAGAGTGAGTAGTCTTGCAATTTCTTGATTTCTTAATCGCACtt < 2:2861669/91‑1 (MQ=255) aaCATGCAAGTGTCAATTAAGGGGAGCACTTGCATAAATAGTATAGGAGAGTGAGTAGTCTTGCAATTTCTTGATTTCTTAATCGCACttt < 1:1745286/91‑1 (MQ=255) aCATGCAAGTGTCAATTAAGGGGAGCACTTGCATAAATAGTATAGGAGAGTGAGTAGTCTTGCAATTTCTTGATTTCTTAATCGCACtttt > 1:222457/1‑91 (MQ=255) cATGCAAGTGTCAATTAAGGGGAGCACTTGCATAAATAGTATAGGAGAGTGAGTAGTCTTGCAATTTCTTGATTTCTTAATCGCACTTTTa > 1:1702773/1‑91 (MQ=255) cATGCAAGTGTCAATTAAGGGGAGCACTTGCATAAATAGTATAGGAGAGTGAGTAGTCTTGCAATTTCTTGATTTCTTAATCGCACTTTTa > 1:1089430/1‑91 (MQ=255) ATGCAAGTGTCAATTAAGGGGAGCACTTGCATAAATAGTATAGGAGAGTGAGTAGTCTTGCAATTTCTTGATTTCTTAATCGCACTTTTAc < 2:2818671‑M1/91‑1 (MQ=255) | GCATGTATTGTGGGTTTTTCTACTTTTTGTAAATATTGAAAATTATAAGTAGTTGTTTTTTACTATTAGGGCAGAATGCTTTACAATAACATGCAAGTGTCAATTAAGGGGAGCACTTGCATAAATAGTATAGGAGAGTGAGTAGTCTTGCAATTTCTTGATTTCTTAATCGCACTTTTAC > USA300TCH1516_ALE/2377131‑2377311 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |