| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | 2422230 = | 212 (1.110) | 8 (0.050) | 7/148 | NT | 4.1% | coding (871/1125 nt) | hpxO | FAD‑dependent urate hydroxylase |
| ? | USA300TCH1516_ALE | 2422269 = | 174 (0.990) | coding (832/1125 nt) | hpxO | FAD‑dependent urate hydroxylase | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 249 total aligned reads displayed.
CACGTATTTTATCATAACGCTGTAATGCTTTTTCAAAGTCGTATGCGTTAAAACAATTTACTAATACGATAGCATCTTCCATTGCTTGTCCAGCACCTTGCCCCATATTAGGCGTTGTCGCATGTGCTGCATCTCCTAGTAAAATAGTACGACCATAAACAAAAGATTTGAGTGGTTTCAA > USA300TCH1516_ALE/2422140‑2422320 | acttATTTTATCATAACGCTGTAATGCTTTTTCAAAGTCGTATGCGTTAAAACAATTTACTAATACGATAGCATCTTCCATTGCTTGTCCa < 1:1382156/88‑1 (MQ=255) gTATTTTATCATAACGCTGTAATGCTTTTTCAAAGTCGTATGCGTTAAAACAATTTACTAATACGATAGCATCTTCCATTGCTTGTCCAGc > 2:2899477/1‑91 (MQ=255) gTATTTTATCATAACGCTGTAATGCTTTTTCAAAGTCGTATGCGTTAAAACAATTTACTAATACGATAGCATCTTCCATTGCTTGTCCAGc > 2:3569079/1‑91 (MQ=255) gaaacaggtatcttattgcataatatttatgatttgaaaccactcaaatcttttgtttatggtcgtactattttactaggagatgCAGCAc < 1:95206‑M1/6‑1 (MQ=255) aTTTTATCATAACGCTGTAATGCTTTTTCAAAGTCGTATGCGTTAAAACAATTTACTAATACGATAGCATCTTCCATTGCTTGTCCAGCAc > 1:1021683/1‑91 (MQ=255) ttATCATAACGCTGTAATGCTTTTTCAAAGTCGTATGCGTTAAAACAATTTACTAATACGATAGCATCTTCCATTGCTTGTCCAGCACCtt > 1:848770/1‑91 (MQ=255) tATCATAACGCTGTAATGCTTTTTCAAAGTCGTATGCGTTAAAACAATTTACTAATACGATAGCATCTTCCATTGCTTGTCCAGCACCTTg < 2:2667843/91‑1 (MQ=255) tATCATAACGCTGTAATGCTTTTTCAAAGTCGTATGCGTTAAAACAATTTACTAATACGATAGCATCTTCCATTGCTTGTCCAGCACCTTg < 2:1529067/91‑1 (MQ=255) aTCATAACGCTGTAATGCTTTTTCAAAGTCGTATGCGTTAAAACAATTTACTAATACGATAGCATCTTCCATTGCTTGTCCAGCACCTTGc > 2:388201/1‑91 (MQ=255) aTCATAACGCTGTAATGCTTTTTCAAAGTCGTATGCGTTAAAACAATTTACTAATACGATAGCATCTTCCATTGCTTGTCCAGCACCTTGc > 1:2661529/1‑91 (MQ=255) aTCATAACGCTGTAATGCTTTTTCAAAGTCGTATGCGTTAAAACAATTTACTAATACGATAGCATCTTCCATTGCTTGTCCAGCACCTTGc > 2:1882750/1‑91 (MQ=255) tCATAACGCTGTAATGCTTTTTCAAAGTCGTATGCGTTAAAACAATTTACTAATACGATAGCATCGTCCATTGCTTGTCCAGCACCTTGcc < 2:169056/91‑1 (MQ=255) cATAACGCTGTAATGCTTTTTCAAAGTCGTATGCGTTAAAACAATTTACTAATACGATAGCATCTTCCATTGCTTGTCCAGCACCTTGccc < 2:1456218/91‑1 (MQ=255) aTAACGCTGTAATGCTTTTTCAAAGTCGTATGCGTTAAAACAATTTACTAATACGATAGCATCTTCCATTGCTTGTCCAGCACCTTGcccc < 1:1585253/91‑1 (MQ=255) aTAACGCTGTAATGCTTTTTCAAAGTCGTATGCGTTAAAACAATTTACTAATACGATAGCATCTTCCATTGCTTGTCCAGCACCTTGcccc < 2:77591/91‑1 (MQ=255) aTAACGCTGTAATGCTTTTTCAAAGTCGTATGCGTTAAAACAATTTACTAATACGATAGCATCTTCCATTGCTTGGCCAGCACCTTGcccc < 1:1748099/91‑1 (MQ=255) tAACGCTGTAATGCTTTTTCAAAGTCGTATGCGTTAAAACAATTTACTAATACGATAGCATCTTCCATTGCTTGTCCAGCACCTTGCCCCa > 1:3137973/1‑91 (MQ=255) tAACGCTGTAATGCTTTTTCAAAGTCGTATGCGTTAAAACAATTTACTAATACGATAGCATCTTCCATTGCTTGTCCAGCACCTTGCCCCa > 2:2514408/1‑91 (MQ=255) tAACGCTGTAATGCTTTTTCAAAGTCGTATGCGTTAAAACAATTTACTAATACGATAGCATCTTCCATTGCTTGTCCAGCACCTTGCCCCa < 1:2752712/91‑1 (MQ=255) tcttattgcataatatttatgatttgaaaccactcaaatcttttgtttatggtcgtactattttactaggagatgcag > 1:1669649‑M1/76‑78 (MQ=255) aaCGCTGTAATGCTTTTTCAAAGTCGTATGCGTTAAAACAATTTACTAATACGATAGCATCTTCCATTGCTTGTCCAGCACCTTGCCCCat > 2:1978252/1‑91 (MQ=255) aaCGCTGTAATGCTTTTTCAAAGTCGTATGCGTTAAAACAATTTACTAATACGATAGCATCTTCCATTGCTTGTCCAGCACCTTGCCCCat > 1:2017670/1‑91 (MQ=255) aCGCTGTAATGCTTTTTCAAAGTCGTATGCGTTAAAACAATTTACTAATACGATAGCATCTTCCATTGCTTGTCCAGCACCTTGCCCCata < 2:634101/91‑1 (MQ=255) cGCTGTAATGCTTTTTCAAAGTCGTATGCGTTAAAACAATTTACTAATACGATAGCATCTTCCATTGCTTGTCCAGCACCTTGCCCCatat < 1:3356429/91‑1 (MQ=255) gCTGTAATGCTTTTTCAAAGTCGTATGCGTTAAAACAATTTACTAATACGATAGCATCTTCCATTGCTTGTCCAGCACCTTGCCCCATAtt > 1:352864/1‑91 (MQ=255) gCTGTAATGCTTTTTCAAAGTCGTATGCGTTAAAACAATTTACTAATACGATAGCATCTTCCATTGCTTGTCCAGCACCTTGCCCCATAtt < 2:1715828/91‑1 (MQ=255) gCTGTAATGCTTTTTCAAAGTCGTATGCGTTAAAACAATTTACTAATACGATAGCATCTTCCATTGCTTGTCCAGCACCTTGCCCCATAtt < 2:2436430/91‑1 (MQ=255) gCTGTAATGCTTTTTCAAAGTCGTATGCGTTAAAACAATTTACTAATACGATAGCATCTTCCATTGCTTGTCCAGCACCTTGCCCCATAtt < 2:1399958/91‑1 (MQ=255) gTAATGCTTTTTCAAAGTCGTATGCGTTAAAACAATTTACTAATACGATAGCATCTTCCATTGCTTGTCCAGCACCTTGCCCCATATTAgg > 2:1356895/1‑91 (MQ=255) gTAATGCTTTTTCAAAGTCGTATGCGTTAAAACAATTTACTAATACGATAGCATCTTCCATTGCTTGTCCAGCACCTTGCCCCATATTAgg < 1:2365563/91‑1 (MQ=255) tAATGCTTTTTCAAAGTCGTATGCGTTAAAACAATTTACTAATACGATAGCATCTTCCATTGCTTGTCCAGCACCTTGCCCCATATTAGGc < 1:2044261/91‑1 (MQ=255) aaTGCTTTTTCAAAGTCGTATGCGTTAAAACAATTTACTAATACGATAGCATCTTCCATTGCTTGTCCAGCACCTTGCCCCATATTAGGCg < 2:11022/91‑1 (MQ=255) aaTGCTTTTTCAAAGTCGTATGCGTTAAAACAATTTACTAATACGATAGCATCTTCCATTGCTTGTCCAGCACCTTGCCCCATATTAGGCg > 1:1330411/1‑91 (MQ=255) cTTTTTCAAAGTCGTATGCGTTAAAACAATTTACTAATACGATAGCATCTTCCATTGCTTGTCCAGCACCTTGCCCCATATTAGGCGTTGt < 1:2818340/91‑1 (MQ=255) tttttCAAAGTCGTATGCGTTAAAACAATTTACTAATACGATAGCATGTTCCATTGCTTGTCCAGCACCTTGCCCCATATTAGGCGTTGTc < 2:2995895/91‑1 (MQ=255) tttttCAAAGTCGTATGCGTTAAAACAATTTACTAATACGATAGCATCTTCCATTGCTTGTCCAGCACCTTGCCCCATATTAGGCGTTGTc < 1:2203981/91‑1 (MQ=255) tttttCAAAGTCGTATGCGTTAAAACAATTTACTAATACGATAGCATCTTCCATTGCTTGTCCAGCACCTTGCCCCATATTAGGCGTTGTc < 2:2438652/91‑1 (MQ=255) tatttatgatttgaaaccactcaaatcttttgtttatggtcgtactattttactaggagatgCAGCACCTTGCCCCATATTAGGCGTTGTc > 2:955236‑M1/63‑91 (MQ=255) ttttCAAAGTCGTATGCGTTAAAACAATTTACTAATACGATAGCATCTTCCATTGCTTGTCCAGCACCTTGCCCCATATTAGGCGTTGTCg > 2:2911046/1‑91 (MQ=255) atttatgatttgaaaccactcaaatcttttgtttatggtcgtactattttactaggagatgCAGCACCTTGCCCCATATTAGGCGTTGTCg > 2:3498346‑M1/62‑91 (MQ=255) tttCAAAGTCGTATGCGTTAAAACAATTTACTAATACGATAGCATCTTCCATTGCTTGTCCAGCACCTTGCCCCATATTAGGCGTTGTCGc < 1:1486725/91‑1 (MQ=255) cAAAGTCGTATGCGTTAAAACAATTTACTAATACGATAGCATCTTCCATTGCTTGTCCAGCACCTTGCCCCATATTAGGCGTTGTCGCAtg > 1:2746207/1‑91 (MQ=255) atgatttgaaaccactcaaatcttttgtttatggtcgtactattttactaggagatgCAGCACCTTGCCCCATATTAGGCGTTGTCGCAtg > 1:3838822‑M1/58‑91 (MQ=255) tgatttgaaaccactcaaatcttttgtttatggtcgtactattttactaggagatgCAGCACCTTGCCCCATATTAGGCGTTGTCGCAtgt > 1:2716776‑M1/57‑91 (MQ=255) gatttgaaaccactcaaatcttttgtttatggtcgtactattttactaggagatgCAGCACCTTGCCCCATATTAGGCGTTGTCGCAtgtg > 2:738595‑M1/56‑91 (MQ=255) aGTCGTATGCGTTAAAACAATTTACTAATACGATAGCATCTTCCATTGCTTGTCCAGCACCTTGCCCCATATTAGGCGTTGTCGCATGtgc > 2:3354497/1‑91 (MQ=255) aGTCGTATGCGTTAAAACAATTTACTAATACGATAGCATCTTCCATTGCTTGTCCAGCACCTTGCCCCATATTAGGCGTTGTCGCATGtgc < 2:2367090/91‑1 (MQ=255) aGTCGTATGCGTTAAAACAATTTACTAATACGATAGCATCTTCCATTGCTTGTCCAGCACCTTGCCCCATATTAGGCGTTGTCGCATGtgc < 1:696452/91‑1 (MQ=255) aGTCGTATGCGTTAAAACAATTTACTAATACGATAGCATCTTCCATTGCTTGTCCAGCACCTTGCCCCATATTAGGCGTTGTCGCATGtgc < 1:538050/91‑1 (MQ=255) tCGTATGCGTTAAAACAATTTACTAATACGATAGCATCTTCCATTGCTTGTCCAGCACCTTGCCCCATATTAGGCGTTGTCGCATGtgctg < 1:2141801/91‑1 (MQ=255) cGTATGCGTTAAAACAATTTACTAATACGATAGCATCTTCCATTGCTTGTCCAGCACCTTGCCCCATATTAGGCGTTGTCGCATGtgctgc < 2:2152470/91‑1 (MQ=255) gTATGCGTTAAAACAATTTACTAATACGATAGCATCTTCCATTGCTTGTCCAGCACCTTGCCCCATATTAGGCGTTGTCGCATGTGCTGCa < 1:2955614/91‑1 (MQ=255) tATGTGTTAAAACAATTTACTAATACGATAGCATCTTCCATTGCTTGTCCAGCACCTTGCCCCATATTAGGCGTTGTCGCATGTGCTGCAt > 2:47317/1‑91 (MQ=255) tGCGTTAAAACAATTTACTAATACGATAGCATCTTCCATTGCTTGTCCAGCACCTTGCCCCATATTAGGCGTTGTCGCATGTGCTGCAtct > 1:1789460/1‑91 (MQ=255) gCGTTAAAACAATTTACTAATACGATAGCATCTTCCATTGCTTGTCCAGCACCTTGCCCCATATTAGGCGTTGTCGCATGTGCTGCAtctc < 2:2746207/91‑1 (MQ=255) gCGTTAAAACAATTTACTAATACGATAGCATCTTCCATTGCTTGTCCAGCACCTTGCCCCATATTAGGCGTTGTCGCATGTGCTGCAtctc < 1:1715980/91‑1 (MQ=255) gCGTTAAAACAATTTACTAATACGATAGCATCTTCCATTGCTTGTCCAGCACCTTGCCCCATATTAGGCGTTGTCGCATGTGCTGCAtctc > 1:1618331/1‑91 (MQ=255) gCGTTAAAACAATTTACTAATACGATAGCATCTTCCATTGCTTGTCCAGCACCTTGCCCCATATTAGGCGTTGTCGCATGTGCTGCAtctc < 1:1882750/91‑1 (MQ=255) tAAAACAATTTACTAATACGATAGCATCTTCCATTGCTTGTCCAGCACCTTGCCCCATATTAGGCGTTGTCGCATGTGCTGCATCTCCTAg < 1:379122/91‑1 (MQ=255) aaaaCAATTTACTAATGCGATAGCATCTTCCATTGCTTGTCCAGCACCTTGCCCCATATTAGGCGTTGTCGCATGTGCTGCATCTCCTAGt < 2:1752864/91‑1 (MQ=255) aaaaCAATTTACTAATACGATAGCATCTTCCATTGCTTGTCCAGCACCTTGCCCCATATTAGGCGTTGTCGCATGTGCTGCATCTCCTAGt > 1:2551179/1‑91 (MQ=255) aaaaCAATTTACTAATACGATAGCATCTTCCATTGCTTGTCCAGCACCTTGCCCCATATTAGGCGTTGTCGCATGTGCTGCATCTCCTAGt > 2:1545665/1‑91 (MQ=255) aaaCAATTTACTAATACGATAGCATCTTCCATTGCTTGTCCAGCACCTTGCCCCATATTAGGCGTTGTCGCATGTGCTGCATCTCCTAGTa < 2:1234293/91‑1 (MQ=255) aaCAATTTACTAATACGATAGCATCTTCCATTGCTTGTCCAGCACCTTGCCCCATATTAGGCGTTGTCGCATGTGCTGCATCTCCTAGTaa > 2:2799205/1‑91 (MQ=255) aaCAATTTACTAATACGATAGCATCTTCCATTGCTTGTCCAGCACCTTGCCCCATATTAGGCGTTGTCGCATGTGCTGCATCTCCTAGTaa < 1:2903294/91‑1 (MQ=255) aCAATTTACTAATACGATAGCATCTTCCATTGCTTGTCCAGCACCTTGCCCCATATTAGGCGTTGTCGCATGTGCTGCATCTCCTAGTaaa < 1:1006462/91‑1 (MQ=255) aCAATTTACTAATACGATAGCATCTTCCATTGCTTGTCCAGCACCTTGCCCCATATTAGGCGTTGTCGCATGTGCTGCATCTCCTAGTaaa < 1:1712936/91‑1 (MQ=255) aCAATTTACTAATACGATAGCATCTTCCATTGCTTGTCCAGCACCTTGCCCCATATTAGGCGTTGTCGCATGTGCTGCATCTCCTAGTaaa > 1:3574858/1‑91 (MQ=255) aaTTTACTAATACGATAGCATCTTCCATTGCTTGTCCAGCACCTTGCCCCATATTAGGCGTTGTCGCATGTGCTGCATCTCCTAGTAAAAt > 2:2609414/1‑91 (MQ=255) aTTTACTAATACGATAGCATCTTCCATTGCTTGTCCAGCACCTTGCCCCATATTAGGCGTTGTCGCATGTGCTGCATCTCCTAGTAAAATa > 2:3698922/1‑91 (MQ=255) aTTTACTAATACGATAGCATCTTCCATTGCTTGTCCAGCACCTTGCCCCATATTAGGCGTTGTCGCATGTGCTGCATCTCCTAGTAAAATa > 1:3301124/1‑91 (MQ=255) tttACTAATACGATAGCATCTTCCATTGCTTGTCCAGCACCTTGCCCCATATTAGGCGTTGTCGCATGTGCTGCATCTCCTAGTAAAATAg < 1:3473947/91‑1 (MQ=255) tttACTAATACGATAGCATCTTCCATTGCTTGTCCAGCACCTTGCCCCATATTAGGCGTTGTCGCATGTGCTGCATCTCCTAGTAAAATAg < 2:113933/91‑1 (MQ=255) tttACTAATACGATAGCATCTTCCATTGCTTGTCCAGCACCTTGCCCCATATTAGGCGTTGTCGCATGTGCTGCATCTCCTAGTAAAATAg < 2:2332166/91‑1 (MQ=255) ttACTAATACGATAGCATCTTCCATTGCTTGTCCAGCACCTTGCCCCATATTAGGCGTTGTCGCATGTGCTGCATCTCCTAGTAAAATAGt > 2:313067/1‑91 (MQ=255) aCTAATACGATAGCATCTTCCATTGCTTGTCCAGCACCTTGCCCCATATTAGGCGTTGTCGCATGTGCTGCATCTCCTAGTAAAATAGTAc > 2:3278985/1‑91 (MQ=255) aCTAATACGATAGCATCTTCCATTGCTTGTCCAGCACCTTGCCCCATATTAGGCGTTGTCGCATGTGCTGCATCTCCTAGTAAAATAGTAc < 2:2870632/91‑1 (MQ=255) cTAATACGATAGCATCTTCCATTGCTTGTCCAGCACCTTGCCCCATATTAGGCGTTGTCGCATGTGCTGCATCTCCTAGTAAAATAGTACg > 2:2079703/1‑91 (MQ=255) cTAATACGATAGCATCTTCCATTGCTTGTCCAGCACCTTGCCCCATATTAGGCGTTGTCGCATGTGCTGCATCTCCTAGTAAAATAGTACg > 1:94506/1‑91 (MQ=255) cTAATACGATAGCATCTTCCATTGCTTGTCCAGCACCTTGCCCCATATTAGGCGTTGTCGCATGTGCTGCATCTCCTAGTAAAATAGTACg > 2:1260744/1‑91 (MQ=255) tAATACGATAGCATCTTCCATTGCTTGTCCAGCACCTTGCCCCATATTAGGCGTTGTCGCATGTGCTGCATCTCCTAGTAAAATAGTACGa > 1:3562789/1‑91 (MQ=255) aCGATAGCATCTTCCATTGCTTGTCCAGCACCTTGCCCCATATTAGGCGTTGTCGCATGTGCTGCATCTCCTAGTAAAATAGTACGACCAt > 1:370347/1‑91 (MQ=255) gATAGCATCTTCCATTGCTTGTCCAGCACCTTGCCCCATATTAGGCGTTGTCGCATGTGCTGCATCTCCTAGTAAAATAGTACGACCATaa < 1:2445053/91‑1 (MQ=255) aTAGCATCTTCCATTGCTTGTCCAGCACCTTGCCCCATATTAGGCGTTGTCGCATGTGCTGCATCTCCTAGTAAAATAGTACGACCATaaa < 1:513302/91‑1 (MQ=255) tAGCATCTTCCATTGCTTGTCCAGCACCTGGCCCCATATTAGGCGTTGTCGCATGTGCTGCATCTCCTAGTAAAATAGTACGACCATAAAc < 2:2688196/91‑1 (MQ=255) gCATCTTCCATTGCTTGTCCAGCACCTTGCCCCATATTAGGCGTTGTCGCATGTGCTGCATCTCCTAGTAAAATAGTACGACCATAAACaa < 1:2255645/91‑1 (MQ=255) gCATCTTCCATTGCTTGTCCAGCACCTTGCCCCATATTAGGCGTTGTCGCATGTGCTGCATCTCCTAGTAAAATAGTACGACCATAAACaa < 1:1975063/91‑1 (MQ=255) cATCTTCCATTGCTTGTCCAGCACCTTGCCCCATATTAGGCGTTGTCGCATGTGCTGCATCTCCTAGTAAAATAGTACGACCATAAACaaa < 1:3863257/91‑1 (MQ=255) cATCTTCCATTGCTTGTCCAGCACCTTGCCCCATATTAGGCGTTGTCGCATGTGCTGCATCTCCTAGTAAAATAGTACGACCATAAACaaa > 1:2150365/1‑91 (MQ=255) cATCTTCCATTGCTTGTCCAGCACCTTGCCCCATATTAGGCGTTGTCGCATGTGCTGCATCTCCTAGTAAAATAGTACGACCATAAACaaa > 2:90267/1‑91 (MQ=255) ttCCATTGCTTGTCCAGCACCTTGCCCCATATTAGGCGTTGTCGCATGTGCTGCATCTCCTAGTAAAATAGTACGACCATAAACAAAAGAt < 2:1659601/91‑1 (MQ=255) ttCCATTGCTTGTCCAGCACCTTGCCCCATATTAGGCGTTGTCGCATGTGCTGCATCTCCTAGTAAAATAGTACGACCATAAACAAAAGAt > 2:1378813/1‑91 (MQ=255) ttCCATTGCTTGTCCAGCACCTTGCCCCATATTAGGCGTTGTCGCATGTGCTGCATCTCCTAGTAAAATAGTACGACCATAAACAAAAGAt < 2:3846986/91‑1 (MQ=255) ccATTGCTTGTCCAGCACCTTGCCCCATATTAGGCGTTGTCGCATGTGCTGCATCTCCTAGTAAAATAGTACGACCATAAACAAAAGAttt < 1:750707/91‑1 (MQ=255) cATTGCTTGTCCAGCACCTTGCCCCATATTAGGCGTTGTCGCATGTGCTGCATCTCCTAGTAAAATAGTACGACCATAAACAAAAGATTTg < 1:2165143/91‑1 (MQ=255) ttGCTTGTCCAGCACCTTGCCCCATATTAGGCGTTGTCGCATGTGCTGCATCTCCTAGTAAAATAGTACGACCATAAACAAAAGATTTGAg > 2:1867803/1‑91 (MQ=255) cTTGTCCAGCACCTTGCCCCATATTAGGCGTTGTCGCATGTGCTGCATCTCCTAGTAAAATAGTACGACCATAAACAAAAGATTTGAGTgg > 1:1176529/1‑91 (MQ=255) ttGTCCAGCACCTTGCCCCATATTAGGCGTTGTCGCATGTGCTGCATCTCCTAGTAAAATAGTACGACCATAAACAAAAGATTTGAGTGGt < 1:2527409/91‑1 (MQ=255) tGTCCAGCACCTTGCCCCATATTAGGCGTTGTCGCATGTGCTGCATCTCCTAGTAAAATAGTACGACCATAAACAAAAGATTTGAGTGGtt > 1:2597849/1‑91 (MQ=255) CAGCACCTTGCCCCATATTAGGCGTTGTCGCATGTGCTGCATCTCCTAGTAAAATAGTACGACCATAAACAAAAGATTTGAGTGGTTTCaa < 2:2233301‑M1/91‑1 (MQ=255) | CACGTATTTTATCATAACGCTGTAATGCTTTTTCAAAGTCGTATGCGTTAAAACAATTTACTAATACGATAGCATCTTCCATTGCTTGTCCAGCACCTTGCCCCATATTAGGCGTTGTCGCATGTGCTGCATCTCCTAGTAAAATAGTACGACCATAAACAAAAGATTTGAGTGGTTTCAA > USA300TCH1516_ALE/2422140‑2422320 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |