| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | = 2719380 | 139 (0.730) | 6 (0.040) | 5/136 | NT | 4.5% | coding (324/705 nt) | cpnA | Cyclopentanol dehydrogenase |
| ? | USA300TCH1516_ALE | = 2719397 | 138 (0.850) | coding (341/705 nt) | cpnA | Cyclopentanol dehydrogenase | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 231 total aligned reads displayed.
CATTAACAATGCAGGTATATCTGGTCAATTTTCAGCACCTTCCAAATTGACACCTCGTGACGTTGAAGAAGTATATCAAACGAATGTATTCGGTATCGTACGAATGATGAATACATTCGTCCCTCTCTTAGAAAAATCTGAACAACCTGTTGTCGTCAACGTATCAAGTGGTTTAGGTTCA > USA300TCH1516_ALE/2719290‑2719470 | tttAACAATGCAGGTATATCTGGTCAATTTTCATCACCTTACAAATTGACACCTCGTGACGTTGAAGAAGTATATCAAACGAATGTATTCg < 1:603305/90‑1 (MQ=255) aTTAACAATGCAGGTATATCTGGTCAATTTTCAGCACCTTCCAAATTGACACCTCGTGACGTTGAAGAAGTATATCAAACGAATGTATTCg > 2:2879556/1‑91 (MQ=255) aTTAACAATGCAGGTATATCTGGTCAATTTTCAGCACCTTCCAAATTGACACCTCGTGACGTTGAAGAAGTATATCAAACGAATGTATTCg > 1:3595471/1‑91 (MQ=255) aTTAACAATGCAGGTATATCTGGTCAATTTTCAGCACCTTCCAAATTGACACCTCGTGACGTTGAAGAAGTATATCAAACGAATGTATTCg > 1:1458621/1‑91 (MQ=255) ttAACAATGCAGGTATATCTGGTCAATTTTCAGCACCTTCCAAATTGACACCTCGTGACGTTGAAGAAGTATATCAAACGAATGTATTCgg < 1:455021/91‑1 (MQ=255) aaCAATGCAGGTATATCTGGTCAATTTTCAGCACCTTCCAAATTGACACCTCGTGACGTTGAAGAAGTATATCAAACGAATGTATTCGGTa < 2:2503851/91‑1 (MQ=255) aCAATGCAGGTATATCTGGTCAATTTTCAGCACCTTCCAAATTGACACCTCGTGACGTTGAAGAAGTATATCAAACGAATGTATTCGGTAt > 1:327031/1‑91 (MQ=255) aCAATGCAGGTATATCTGGTCAATTTTCAGCACCTTACAAATTGCCACCTCGTGACGTTGAAGAAGTATATCAAACGAATGTATTCGGTAt < 2:3052648/91‑1 (MQ=255) aaTGCAGGTATATCTGGTCAATTTTCAGCACCTTCCAAATTGACACCTCGTGACGTTGAAGAAGTATATCAAACGAATGTATTCGGTATCg < 2:3735391/91‑1 (MQ=255) aTGCAGGTATATCTGGTCAATTTTCAGCACCTTCCAAATTGACACCTCGTGACGTTGAAGAAGTATATCAAACGAATGTATTCGGTATCGt < 1:3793462/91‑1 (MQ=255) cAGGTATATCTGGTCAATTTTCAGCACCTTCCAAATTGACACCTCGTGACGTTGAAGAAGTATATCAAACGAATGTATTCGGTATCGTACg < 2:3261557/91‑1 (MQ=255) aGGTATATCTGGTCAATTTTCAGCACCTTCCAAATTGACACCTCGTGACGTTGAAGAAGTATATCAAACGAATGTATTCGGTATCGTACGa > 1:3754791/1‑91 (MQ=255) ggTATATCTGGTCAATTTTCAGCACCTTCCAAATTGACACCTCGTGACGTTGAAGAAGTATATCAAACGAATGTATTCGGTATCGTACGaa < 2:377378/91‑1 (MQ=255) ggTATATCTGGTCAATTTTCAGCACCTTCCAAATTGACACCTCGTGACGTTGAAGAAGTATATCAAACGAATGTATTCGGTATCGTACGaa < 2:3439437/91‑1 (MQ=255) gTATATCTGGTCAATTTTCAGCACCTTCCAAATTGACACCTCGTGACGTTGAAGAAGTATATCAAACGAATGTATTCGGTATCGTACGAat > 2:3227183/1‑91 (MQ=255) atatCTGGTCAATTTTCAGCACCTTCCAAATTGACACCTCGTGACGTTGAAGACGTATATCAAACGAATGTATTCGGTATCGTACGAatga > 2:1169517/1‑91 (MQ=255) atatCTGGTCAATTTTCAGCACCTTCCAAATTGACACCTCGTGACGTTGAAGAAGTATATCAAACGAATGTATTCGGTATCGTACGAatga > 1:2088054/1‑91 (MQ=255) tatCTGGTCAATTTTCAGCACCTTCCAAATTGACACCTCGTGACGTTGAAGAAGTATATCAAACGAATGTATTCGGTATCGTACGAatgat > 1:516330/1‑91 (MQ=255) tatCTGGTCAATTTTCAGCACCTTCCAAATTGACACCTCGTGACGTTGAAGAAGTATATCAAACGAATGTATTCGGTATCGTACGAatgat < 2:1697737/91‑1 (MQ=255) tatCTGGTCAATTTTCAGCACCTTCCAAATTGACACCTCGTGACGTTGAAGAAGTATATCAAACGAATGTATTCGGTATCGTACGAatgat > 2:29497/1‑91 (MQ=255) tatCTGGTCAAGTTTCAGCACCGGCCAGATTGACACCTCGTGACGTTGATGAAGTATATGAAACGAATGTATTCGGTATCGTACGAatgat < 2:2952196/91‑1 (MQ=255) aTCTGGTCAATTTTCAGCACCTTCCAAATTGACACCTCGTGACGTTGAAGAAGTATATCAAACGAATGTATTCGGTATCGTACGAATGATg < 2:2539606‑M2/91‑2 (MQ=255) cTGGTCAATTTTCAGCACCTTCCAAATTGACACCTCGTGACGTTGAAGAAGTATATCAAACGAATGTATTCatcattcgtacgataccgaa < 1:620960‑M1/91‑21 (MQ=255) tGGTCAATTTTCAGCACCTTCCAAATTGACACCTCGTGACGTTGAAGAAGTATGTCAAACGAATGTATTCatcattcgtacgataccgaat < 1:1185989‑M1/91‑22 (MQ=255) tGGTCAATTTTCAGCACCTTCCAAATTGACACCTCGTGACGTTGAAGAAGTATATCAAACGAATGTATTCGGTATCGTACGAATGATgaat < 2:1057916‑M2/91‑5 (MQ=255) gTCAATTTTCAGCACCTTCCAAATTGACACCTCGTGACGTTGAAGAAGTATATCAAACGAATGTATTCGGTATCGTACGAATGATgaatac < 2:1654772‑M2/91‑7 (MQ=255) gTCAATTTTCAGCACCTTCCAAATTGACACCTCGTGACGTTGAAGAAGTATATCAAACGAATGTATTCGGTATCGTACGAATGATgaatac < 1:264534‑M2/91‑7 (MQ=255) gTCAATTTTCAGCACCTTCCAAATTGACACCTCGTGACGTTGAAGAAGTATATCAAACGAATGTATTCGGTATCGTACGAATGATgaatac < 2:1867753‑M2/91‑7 (MQ=255) cAATTTTCAGCACCTTCCAAATTGACACCTCGTGACATTGAAGAAGTATATCAAACGAATGTATTCGGTATCGTACGAATGATgaatacat > 2:3064645‑M2/1‑83 (MQ=255) aTTTTCAGCACCTTCCAAATTGACACCTCGTGACGTTGAAGAAGTATATCAAACGAATGTATTCGGTATCGTACGAATGATgaatacattc < 2:125883‑M2/91‑11 (MQ=255) ttttCAGCACCTTCCAAATTGACACCTCGTGACGTTGAAGAAGTATATCAAACGAATGTATTCGGTATCGTACGAATGATgaatacattcg < 1:3072426‑M2/91‑12 (MQ=255) ttttCAGCACCTTCCAAATTGACACCTCGTGACGTTGAAGAAGTATATCAAACGAATGTATTCGGTATCGTACGAATGATgaatacattcg > 2:1047495‑M2/1‑80 (MQ=255) ttttCAGCACCTTCCAAATTGACACCTCGTGACGTTGAAGAAGTATATCAAACGAATGTATTCGGTATCGTACGAATGATgaatacattcg > 2:3312541‑M2/1‑80 (MQ=255) tttCAGCACCTTCCAAATTGACACCTCGTGACGTTGAAGAAGTATATCAAACGAATGTATTCGGTATCGTACGAATGATgaatacattcgt < 1:863790‑M2/91‑13 (MQ=255) gCACCTTCCAAATTGACACCTCGTGACGTTGAAGAAGTATATCAAACGAATGTATTCGGTATCGTACGAATGATGAATACATTCGTCCctc > 1:2701407/1‑91 (MQ=255) gCACCTTCCAAATTGACACCTCGTGACGTTGAAGAAGTATATCAAACGAATGTATTCGGTATCGTACGAATGATGAATACATTCGTCCctc > 2:473051/1‑91 (MQ=255) gCACCTTCCAAATTGACACCTCGTGACGTTGAAGAAGTATATCAAACGAATGTATTCGGTATCGTACGAATGATGAATACATTCGTCCctc > 1:3425695/1‑91 (MQ=255) gCACCTTCCAAATTGACACCTCGTGACGTTGAAGAAGTATATCAAACGAATGTATTCGGTATCGTACGAATGATGAATACATTCGTCCctc > 1:2406852/1‑91 (MQ=255) cACCTTCCAAATTGACACCTCGTGACGTTGAAGAAGTATATCAAACGAATGTATTCGGTATCGTACGAATGATGAATACATTCGTCCctct > 1:2054463/1‑91 (MQ=255) cACCTTCCAAATTGACACCTCGTGACGTTGAAGAAGTATATCAAACGAATGTATTCGGTATCGTACGAATGATGAATACATTCGTCCctct > 1:2306920/1‑91 (MQ=255) cACCTTCCAAATTGACACCTCGTGACGTTGAAGAAGTATATCAAACGAATGTATTCGGTATCGTACGAATGATGAATACATTCGTCCctct > 1:1648181/1‑91 (MQ=255) ccTTCCAAATTGACACCTCGTGACGTTGAAGAAGTATATCAAACGAATGTATTCGGTATCGTACGAATGATGAATACATTCGTCCctctct < 2:2137856/91‑1 (MQ=255) tCCAAATTGACACCTCGTGACGTTGAAGAAGTATATCAAACGAATGTATTCGGTATCGTACGAATGATGAATACATTCGTCCCTCTCTTAg > 1:3620646/1‑91 (MQ=255) aaaTTGACACCTCGTGACGTTGAAGAAGTATATCAAACGAATGTATTCGGTATCGTACGAATGATGAATACATTCGTCCCTCTCTTAGaaa < 1:3533806/91‑1 (MQ=255) aTTGACACCTCGTGACGTTGAAGAAGTATATCAAACGAATGTATTCGGTATCGTACGAATGATGAATACATTCGTCCCTCTCTTAGaaaaa > 2:673769/1‑91 (MQ=255) tGACACCTCGTGACGTTGAAGAAGTATATCAAACGAATGTATTCGGTATCGTACGAATGATGAATACATTCGTCCCTCTCTTAGAAAAATc < 2:3237303/91‑1 (MQ=255) tGACACCTCGTGACGTTGAAGAAGTATATCAAACGAATGTATTCGGTATCGTACGAATGATGAATACATTCGTCCCTCTCTTAGAAAAATc < 2:3613640/91‑1 (MQ=255) gACACCTCGTGACGTTGAAGAAGTATATCAAACGCATGTATTCGGTATCGTACGAACGATGAATACATTCGTACCTCTCTTAGAAAAATCt > 2:19659/1‑91 (MQ=255) gACACCTCGTGACGTTGAAGAAGTATATCAAACGAATGTATTCGGTATCGTACGAATGATGAATACATTCGTCCCTCTCTTAGAAAAATCt > 1:3573801/1‑91 (MQ=255) cacCTCGTGACGTTGAAGAAGTATATCAAACGAATGTATTCGGTATCGTACGAATGATGAATACATTCGTCCCTCTCTTAGAAAAATCTGa < 1:420968/91‑1 (MQ=255) acCTCGTGACGTTGAAGAAGTATATCAAACGAATGTATTCGGTATCGTACGAATGATGAATACATTCGTCCCTCTCTTAGAAAAATCTGaa > 2:2159494/1‑91 (MQ=255) ccTCGTGACGTTGAAGAAGTATATCAAACGAATGTATTCGGTATCGTACGAATGATGAATACATTCGTCCCTCTCTTAGAAAAATCTGaac < 1:1491807/91‑1 (MQ=255) tCGTGACGTTGAAGAAGTATATCAAACGAATGTATTCatcattcgtacgataccgaatacattcgtttgatatacttcttcaacgtcacga < 2:512434‑M1/91‑55 (MQ=255) gACGTTGAAGAAGTATATCAAACGAATGTATTCGGTATCGTACGAATGATGAATACATTCGTCCCTCTCTTAGAAAAATCTGAACAACCtg > 2:3853433/1‑91 (MQ=255) aCGTTGAAGAAGTATATCAAACGAATGTATTCGGTATCGTACGAATGATGAATACATTCGTCCCTCTCTTAGAAAAATCTGAACAACCtgt < 1:3045641/91‑1 (MQ=255) cGTTGAAGAAGTATATCAAACGAATGTATTCGGTATCGTACGAATGATGAATACATTCGTCCCTCTCTTAGAAAAATCTGAACAACCtgtt > 2:1014165/1‑91 (MQ=255) tGAAGAAGTATATCAAACGAATGTATTCGGTATCGTACGAATGATGAATACATTCGTCCCTCTCTTAGAAAAATCTGAACAACCTGTTgtc > 1:84594/1‑91 (MQ=255) gaagaaGTATATCAAACGAATGTATTCGGTATCGTACGAATGATGAATACATTCGTCCCTCTCTTAGAAAAATCTGAACAACCTGTTgtcg > 2:2322127/1‑91 (MQ=255) aagaagTATATCAAACGAATGTATTCGGTATCGTACGAATGATGAATACATTCGTCCCTCTCTTAGAAAAATCTGAACAACCTGTTgtcgt < 2:3199946/91‑1 (MQ=255) aagaagTATATCAAACGAATGTATTCGGTATCGTACGAATGATGAATACATTCGTCCCTCTCTTAGAAAAATCTGAACAACCTGTTgtcgt < 1:3378000/91‑1 (MQ=255) agaagTATATCAAACGAATGTATTCGGTATCGTACGAATGATGAATACATTCGTCCCTCTCTTAGAAAAATCTGAACAACCTGTTgtcgtc > 1:2777724/1‑91 (MQ=255) gaagTATATCAAACGAATGTATTCGGTATCGTACGAATGATGAATACATTCGTCCCTCTCTTAGAAAAATCTGAACAACCTGTTGTCGTCa > 2:3627122/1‑91 (MQ=255) gTATATCAAACGAATGTATTCGGTATCGTACGAATGATGAATACATTCGTCCCTCTCTTAGAAAAATCTGAACAACCTGTTGTCGTCAACg > 1:2307140/1‑91 (MQ=255) atCAAACGAATGTATTCGGTATCGTACGAATGATGAATACATTCGTCCCTCTCTTAGAAAAATCTGAACAACCTGTTGTCGTCAACGTATc < 1:3405529/91‑1 (MQ=255) tCAAACGAATGTATTCGGTATCGTACGAATGATGAATACATTCGTCCCTCTCTTAGAAAAATCTGAACAACCTGTTGTCGTCAACGTATCa > 2:604489/1‑91 (MQ=255) tCAAACGAATGTATTCGGTATCGTACGAATGATGAATACATTCGTCCCTCTCTTAGAAAAATCTGAACAACCTGTTGTCGTCAACGTATCa > 1:133098/1‑91 (MQ=255) tCAAACGAATGTATTCGGTATCGTACGAATGATGAATACATTCGTCCCTCTCTTAGAAAAATCTGAACAACCTGTTGTCGTCAACGTATCa < 2:2190009/91‑1 (MQ=255) cAAACGAATGTATTCGGTATCGTACGAATGATGAATACATTCGTCCCTCTCTTAGAAAAATCTGAACAACCTGTTGTCGTCAACGTATCaa < 1:881921/91‑1 (MQ=255) aaaCGAATGTATTCGGTATCGTACGAATGATGAATACATTCGTCCCTCTCTTAGAAAAATCTGAACAACCTGTTGTCGTCAACGTATCAAg < 1:29497/91‑1 (MQ=255) aCGAATGTATTCatcattcgtacgataccgaatacattcgtttgatatacttcttcaacgtcacgaggtgtcaatttggaaggtgctgaaa > 2:3660941‑M1/1‑12 (MQ=255) cGAATGTATTCatcattcgtacgataccgaatacattcgtttgatatacttcttcaacgtcacgaggtgtcaatttggaaggtgctgaaaa < 1:762632‑M1/91‑81 (MQ=255) gAATGTATTCatcattcgtacgataccgaatacattcgtttgatatacttcttcaacgtcacgaggtgtcaatttggaaggtgctgaaaat > 1:2395267‑M1/1‑10 (MQ=255) aaTGTATTCGGTATCGTACGAATGATGAATACATTCGTCCCTCTCTTAGAAAAATCTGAACAACCTGTTGTCGTCAACGTATCAAGTGGtt < 2:1527079/91‑1 (MQ=255) aaTGTATTCGGTATCGTACGAATGATGAATACATTCGTCCCTCTCTTAGAAAAATCTGAACAACCTGTTGTCGTCAACGTATCAAGTGGtt > 1:1294909/1‑91 (MQ=255) tGTATTCatcattcgtacgataccgaatacattcgtttgatatacttcttcaacgtcacgaggtgtcaatttggaaggtgctgaaaattga > 2:1800339‑M1/1‑7 (MQ=255) tGTATTCGGTATCGTACGAATGATgaatacattcgtttgatatacttcttcaacgtcacgaggtgtccatttggaaggtgctgaaaattga < 2:308778‑M2/91‑68 (MQ=255) tGTATTCGGTATCGTACGAATGATGAATACATTCGTCCCTCTCTTAGAAAAATCTGAACAACCTGTTGTCGTCAACGTATCAAGTGGTTTa > 1:712720/1‑91 (MQ=255) tGTATTCGGTATCGTACGAATGATGAATACATTCGTCCCTCTCTTAGAAAAATCTGAACAACCTGTTGTCGTCAACGTATCAAGTGGTTTa > 1:820162/1‑91 (MQ=255) tGTATTCGGTATCGTACGAATGATGAATACATTCGTCCCTCTCTTAGAAAAATCTGAACAACCTGTTGTCGTCAACGTATCAAGTGGTTTa > 1:2638772/1‑91 (MQ=255) tGTATTCGGTATCGTACGAATGATGAATACATTCGTCCCTCTCTTAGAAAAATCTGAACAACCTGTTGTCGTCAACGTATCAAGTGGTTTa < 2:175142/91‑1 (MQ=255) gTATTCatcattcgtacgataccgaatacattcgtttgatatacttcttcaacgtcacgaggtgtcaatttggaaggtgctgaaaattgac < 1:30260‑M1/91‑86 (MQ=255) gTATTCatcattcgtacgataccgaatacattcgtttgatatacttcttcaacgtcacgaggtgtcaatttggaaggtgctgaaaattgac < 2:1167411‑M1/91‑86 (MQ=255) gTATTCatcattcgtacgataccgaatacattcgtttgatatacttcttcaacgtcacgaggtgtcaatttggaaggtgctgaaaattgac < 1:2714934‑M1/91‑86 (MQ=255) gTATTCatcattcgtacgataccgaatacattcgtttgatatacttcttcaacgtcacgaggtgtcaatttggaaggtgctgaaaattgac < 1:2268505‑M1/91‑86 (MQ=255) gTATTCGGTATCGTACGAATGATgaatacattcgtttgatatacttcttcaacgtcacgaggtgtcaatttggaaggtgctgagaattgac < 2:1292451‑M2/91‑69 (MQ=255) gTATTCGGTATCGTACGAATGATGAATACATTCGTCCCTCTCTTAGAAAAATCTGAACAACCTGTTGTCGTCAACGTATCAAGTGGTTTAg < 1:1326659/91‑1 (MQ=255) gTATTCGGTATCGTACGAATGATGAATACATTCGTCCCTCTCTTAGAAAAATCTGAACAACCTGTTGTCGTCAACGTATCAAGTGGTTTAg < 2:2156355/91‑1 (MQ=255) gTATTCGGTATCGTACGAATGATGAATACATTCGTCCCTCTCTTAGAAAAATCTGAACAACCTGTTGTCGTCAACGTATCAAGTGGTTTAg < 1:559692/91‑1 (MQ=255) gTATTCGGTATCGTACGAATGATGAATACATTCGTCCCTCTCTTAGAAAAATCTGAACAACCTGTTGTCGTCAACGTATCAAGTGGTTTAg < 2:2268505/91‑1 (MQ=255) tATTCatcattcgtacgataccgaatacattcgtttgatatacttcttcaacgtcacgaggtgtcaatttggaaggtgctgaaaattgacc > 1:1208295‑M1/1‑5 (MQ=255) tATTCGGTATCGTACGAATGATGAATACATTCGTCCCTCTCTTAGAAAAATCTGAACAACCTGTTGTCGTCAACGTATCAAGTGGTTTAgg < 2:2695667/91‑1 (MQ=255) tATTCGGTATCGTACGAATGATGAATACATTCGTCCCTCTCTTAGAAAAATCTGAACAACCTGTTGTCGTCAACGTATCAAGTGGTTTAgg > 1:110774/1‑91 (MQ=255) aTTCGGTATCGTACGAATGATGAATACATTCGTCCCTCTCTTAGAAAAATCTGAACAACCTGTTGTCGTCAACGTATCAAGTGGTTTAGGt > 2:755725/1‑91 (MQ=255) aTTCGGTATCGTACGAATGATGAATACATTCGTCCCTCTCTTAGAAAAATCTGAACAACCTGTTGTCGTCAACGTATCAAGTGGTTTAGGt > 2:3743185/1‑91 (MQ=255) aTTCGGTATCGTACGAATGATGAATACATTCGTCCCTCTCTTAGAAAAATCTGAACAACCTGTTGTCGTCAACGTATCAAGTGGTTTAGGt > 2:3403934/1‑91 (MQ=255) ttCatcattcgtacgataccgaatacattcgtttgatatacttcttcaacgtcacgaggtgtcaatttggaaggtgctgaaaattgaccag > 2:241511‑M1/1‑3 (MQ=255) ttCatcattcgtacgataccgaatacattcgtttgatatacttcttcaacgtcacgaggtgtcaatttggaaggtgctgaaaattgaccag > 1:114330‑M1/1‑3 (MQ=255) ttCGGTATCGTACGAATGATgaatacattcgtttgatatacttcttcaacgtcacgaggtgtcaatttggaaggtgctgaaaattgaccag < 1:638411‑M2/91‑72 (MQ=255) ttCGGTATCGTACGAATGATGAATACATTCGTCCCTCTCTTAGAAAAATCTGAACAACCTGTTGTCGTCAACGTATCAAGTGGTTTAGGtt > 2:1402449/1‑91 (MQ=255) cGGTATCGTACGAATGATGAATACATTCGTCCCTCTCTTAGAAAAATCTGAACAACCTGTTGTCGTCAACGTATCAAGTGGTTTAGGTTCa > 2:2034464/1‑91 (MQ=255) | CATTAACAATGCAGGTATATCTGGTCAATTTTCAGCACCTTCCAAATTGACACCTCGTGACGTTGAAGAAGTATATCAAACGAATGTATTCGGTATCGTACGAATGATGAATACATTCGTCCCTCTCTTAGAAAAATCTGAACAACCTGTTGTCGTCAACGTATCAAGTGGTTTAGGTTCA > USA300TCH1516_ALE/2719290‑2719470 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |