| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | = 2830738 | 176 (0.920) | 9 (0.050) | 8/144 | NT | 5.0% | coding (1927/2046 nt) | lipA_2 | Lipase 1 |
| ? | USA300TCH1516_ALE | = 2830760 | 184 (1.070) | coding (1905/2046 nt) | lipA_2 | Lipase 1 | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 230 total aligned reads displayed.
CAGTTTTCACTAAATCGTCTGCTAAATGATGCCAAAAATCTTGTAATTCTTCTCTTGTGCGCACTGTATCAGAACTGTCTTGTCCTACAAAGTCAACATGATCCCAATCATGTTTTGTAGGCGTCACTTGCCAAATGCCTTTTTGAATTTTATCTGTCGCTTTTGTATAAGCTTGATTAA > USA300TCH1516_ALE/2830648‑2830827 | aGTTTTCACTAAATCGTCTGCTAAATGATGCCAAAAATCTTGTAATTCTTCTCTTGTGCGCACTGTATCAGAACTGTCTTGTCCTACAAAg > 2:1542041/1‑91 (MQ=255) gTTTTCACTAAATCGTCTGCTAAATGATGCCAAAAATCTTGTAATTCTTCTCTTGTGCGCACTGTATCAGAACTGTCTTGTCCTACAAAGt > 1:2463182/1‑91 (MQ=255) ttCACTAAATCGTCTGCTAAATGATGCCAAAAATCTTGTAATTCTTCTCTTGTGCGCACTGTATCAGAACTGTCTTGTCCTACAAAGTCaa > 2:546382/1‑91 (MQ=255) ttCACTAAATCGTCTGCTAAATGATGCCAAAAATCTTGTAATTCTTCTCTTGTGCGCACTGTATCAGAACTGTCTTGTCCTACAAAGTCaa > 1:2036210/1‑91 (MQ=255) aCTAAATCGTCTGCTAAATGATGCCAAAAATCTTGTAATTCTTCTCTTGTGCGCACTGTATCAGAACTGTCTTGTCCTACAAAGTCAACAt > 1:1465923/1‑91 (MQ=255) aCTAAATCGTCTGCTAAATGATGCCAAAAATCGTGTAATTCTTCTCTTGTGCGCACTGTATCAGAACTGTCTTGTCCTACAAAGTCAACAt < 2:1154472/91‑1 (MQ=255) cTAAATCGTCTGCTAAATGATGCCAAAAATCTTGTAATTCTTCTCTTGTGCGCACTGTATCAGAACTGTCTTGTCCTACAAAGTCAACATg < 1:1080303/91‑1 (MQ=255) cTAAATCGTCTGCTAAATGATGCCAAAAATCTTGTAATTCTTCTCTTGTGCGCACTGTATCAGAACTGTCTTGTCCTACAAAGTCAACATg < 1:818162/91‑1 (MQ=255) tAAATCGTCTGCTAAATGATGCCAAAAATCTTGTAATTCTTCTCTTGTGCGCACTGTATCAGAACTGTCTTGTCCTACAAAGTCAACATGa > 2:3521719/1‑91 (MQ=255) aaaTCGTCTGCTAAATGATGCCAAAAATCTTGTAATTCTTCTCTTGTGCGCACTGTATCAGAACTGTCTTGTCCTACAAAGTCAACATGAt < 2:3624336/91‑1 (MQ=255) tCGTCTGCTAAATGATGCCAAAAATCTTGTAATTCTTCTCTTGTGCGCACTGTATCAGAACTGTCTTGTCCTACAAAGTCAACATGAttgg < 2:2557074/91‑4 (MQ=255) cGTCTGCTAAATGATGCCAAAAATCTTGTAATTCTTCTCTTGTGCGCACTGTATCAGAACTGTCTTGTCCTACAAAGTCAACATGATCCCa > 1:2200360/1‑91 (MQ=255) cGTCTGCTAAATGATGCCAAAAATCTTGTAATTCTTCTCTTGTGCGCACTGTATCAGAACTGTCTTGTCCTACAAAGTCAACATGATCCCa < 1:637614/91‑1 (MQ=255) gTCTGCTAAATGATGCCAAAAATCTTGTAATTCTTCTCTTGTGCGCACTGTATCAGAACTGTCTTGTCCTACAAAGTCAACATGATCCCaa < 2:1259841/91‑1 (MQ=255) tCTGCTAAATGATGCCAAAAATCTTGTAATTCTTCTCTTGTGCGCACTGTATCAGAACTGTCTTGTCCTACAAAGTCAACATGATCCCAAt > 2:3724950/1‑91 (MQ=255) tCTGCTAAATGATGCCAAAAATCTTGTAATTCTTCTCTTGTGCGCACTGTATCAGAACTGTCTTGTCCTACAAAGTCAACATGATCCCAAt < 2:1492041/91‑1 (MQ=255) tCTGCTAAATGATGCCAAAAATCTTGTAATTCTTCTCTTGTGCGCACTGTATCAGAACTGTCTTGTCCTACAAAGTCAACATGATCCCAAt < 2:1051956/91‑1 (MQ=255) cTGCTAAATGATGCCAAAAATCTTGTAATTCTTCTCTTGTGCGCACTGTATCAGAACTGTCTTGTCCTACAAAGTCAACATGATCCCAATc > 1:2641615/1‑91 (MQ=255) tGCTAAATGATGCCAAAAATCTTGTAATTCTTCTCTTGTGCGCACTGTATCAGAACTGTCTTGTCCTACAAAGTCAACATGATCCCAATCa > 1:2349696/1‑91 (MQ=255) tGCTAAATGATGCCAAAAATCTTGTAATTCGTCTCTTGTGCGCACTGTATCAGAACTGTCGTGTCCTCCAAAGTCAACATGATCCCCATCa > 1:322927/1‑91 (MQ=255) tAAATGATGCCAAAAATCTTGTAATTCTTCTCTTGTGCGCACTGTATCAGAACTGTCTTGTCCTACAAAGTCAACATGATCCCAATCATGt < 1:451754/91‑1 (MQ=255) atgCCAAAAATCTTGTAATTCTTCTCTTGTGCGCACTGTATCAGAACTGGCTTGTCCTACAAAGTCAACATGATCCCAATCATGTtttgta > 2:3661495‑M2/1‑85 (MQ=255) tgCCAAAAATCTTGTAATTCTTCTCTTGTGCGCACTGTATCAGAACTGTCTTGTCCTACAAAGTCAACATGATCCCAATCATGTtttgtag < 1:2763492‑M2/91‑8 (MQ=255) cAAAAATCTTGTAATTCTTCTCTTGTGCGCACTGTATCAGAACTGTCTTGTCCTACAAAGTCAACATGATCCCAATCATGTTTTGTAGGCg < 1:1970567/91‑1 (MQ=255) cAAAAATCTTGTAATTCTTCTCTTGTGCGCACTGTATCAGAACTGTCTTGTCCTACAAAGTCAACATGATCCCAATCATGTTTTGTAGGCg > 1:2806723/1‑91 (MQ=255) aaaaaTCTTGTACTTCTTCTCTTGTGCGCACTGTATCAGAACTGTCTTGTCCTACAAAGTCAACATGATCCCAATCATGTTTTGTAGGCGt > 1:2995548/1‑91 (MQ=255) aaaaaTCTTGTAATTCTTCTCTTGTGCGCACTGTATCAGAACTGTCTTGTCCTACAAAGTCAACATGATCCCAATCATGTTTTGTAGGCGt > 2:120848/1‑91 (MQ=255) aaaaaTCTTGTAATTCTTCTCTTGTGCGCACTGTATCAGAACTGTCTTGTCCTACAAAGTCAACATGATCCCAATCATGGTTTGTAGGCGt > 1:1065949/1‑91 (MQ=255) aaaaaTCTTGTAATTCTTCTCTTGTGCGCACTCTATCAGAACTGTCTTGTCCTACAAAGTCAACATGATCCCAATCATGTTTTGTAGGCGt > 2:3803279/1‑91 (MQ=255) aaTCTTGTAATTCTTCTCTTGTGCGCACTGTATCAGAACTGTCTTGTCCTACAAAGTCAACATGATCCCAATCATGTTTTGTAGGCGTCAc > 1:3094024/1‑91 (MQ=255) aaTCTTGTAATTCTTCTCTTGTGCGCACTGTATCAGAACTGTCTTGTCCTACAAAGTCAACATGATCCCAATCATGTTTTGTAGGCGTCAc > 2:2407146/1‑91 (MQ=255) aaTCTTGTAATTCTTCTCTTGTGCGCACTGTATCAGAACTGTCTTGTCCTACAAAGTCAACATGATCCCAACCATGTCTTGTAGGCGTCAc > 2:2562866/1‑91 (MQ=255) cTTGTAATTCTTCTCTTGTGCGCACTGTATCAGAACTGTCTTGTCCTACAAAGTCAACATGATCCCAATCATGTTTTGTAGGCGTCACTTg < 2:499774/91‑1 (MQ=255) cTTGTAATTCTTCTCTTGTGCGCACTGTATCAGAACTGTCTTGTCCTACAAAGTCAACATGATCCCAATCATGTTTTGTAGGCGTCACTTg > 2:3389018/1‑91 (MQ=255) tGTAATTCTTCTCTTGTGCGCACTGTATCAGAACTGTCTTGTCCTACAAAGTCAACATGATCCCAATCATGTtttgtaggacaagacagtt < 1:2603057‑M2/91‑20 (MQ=255) tGTAATTCTTCTCTTGTGCGCACTGTATCAGAACTGTCTTGTCCTACAAAGTCAACATGATCCCAATCATGTTTTGTAGGCGTCACTTGcc > 2:2843283/1‑91 (MQ=255) tGTAATTCTTCTCTTGTGCGCACTGTATCAGAACTGTCTTGTCCTACAAAGTCAACATGATCCCAATCATGTTTTGTAGGCGTCACTTGcc > 1:2866559/1‑91 (MQ=255) tAATTCTTCTCTTGTGCGCACTGTATCAGAACTGTCTTGTCCTACAAAGTCAACATGATCCCAATCATGTTTTGTAGGCGTCACTTGCCaa > 1:3439760/1‑91 (MQ=255) tAATTCTTCTCTTGTGCGCACTGTATCAGAACTGTCTTGTCCTACAAAGTCAACATGATCCCAATCATGTTTTGTAGGCGTCACTTGCCaa < 1:1142054/91‑1 (MQ=255) tAATTCTTCTCTTGTGCGCACTGTATCAGAACTGTCTTGTCCTACAAAGTCAACATGATCCCAATCATGTTTTGTAGGCGTCACTTGCCaa > 1:918361/1‑91 (MQ=255) aaTTCTTCTCTTGTGCGCACTGTATCAGAACTGTCTTGTCCTACAAAGTCAACATGATCCCAATCATGTTTTGTAGGCGTCACTTGCCaaa > 1:2325951/1‑91 (MQ=255) cttctCTTGTGCGCACTGTATCAGAACTGTCTTGTCCTACAAAGTCAACATGATCCCAATCATGTTTTGTAGGCGTCACTTGCCAAATGcc < 1:3161878/91‑1 (MQ=255) ttctCTTGTGCGCACTGTATCAGAACTGTCTTGTCCTACAAAGTCAACATGATCCCAATCATGTTTTGTAGGCGTCACTTGCCAAATGCCt < 2:2674350/91‑1 (MQ=255) ttctCTTGTGCGCACTGTATCAGAACTGTCTTGTCCTACAAAGTCAACATGATCCCAATCATGTTTTGTAGGCGTCACTTGCCAAATGCCt < 2:3665165/91‑1 (MQ=255) tctcTTGTGCGCACTGTATCAGAACTGTCTTGTCCTACAAAGTCAACATGATCCCAATCATGTTTTGTAGGCGTCACTTGCCAAATGCCtt > 2:3693985/1‑91 (MQ=255) tctTGTGCGCACTGTATCAGAACTGTCTTGTCCTACAAAGTCAACATGATCCCAATCATGTTTTGTAGGCGTCACTTGCCAAATGCCtttt < 1:2909410/91‑1 (MQ=255) tctTGTGCGCACTGTATCAGAACTGTCTTGTCCTACAAAGTCAACATGATCCCAATCATGTTTTGTAGGCGTCACTTGCCAAATGCCtttt > 1:542335/1‑91 (MQ=255) tctTGTGCGCACTGTATCAGAACTGTCTTATCCTACAAAGTCAACATGATCCCAATCATGTTTTCGAGGCGTCACGTGCCAAATGCCtttt > 2:3369621/1‑91 (MQ=255) ctTGTGCGCACTGTATCAGAACTGTCTTGTCCTACAAAGTCAACATGATCCCAATCATGTTTTGTAGGCGTCACTTGCCAAATGCCttttt < 2:2482793/91‑1 (MQ=255) ttGTGCGCACTGTATCAGAACTGTCTTGTCCTACAAAGTCAACATGATCCCAATCATGTTTTGTAGGCGTCACTTGCCAAATGCCTTTTTg > 2:588847/1‑91 (MQ=255) tgtgCGCACTGTATCAGAACTGTCTTGTCCTACAAAGTCAACATGATCCCAATCATGTTTTGTAGGCGTCACTTGCCAAATGCCTTTTTGa > 1:76823/1‑91 (MQ=255) gtgCGCACTGTATCAGAACTGTCTTGTCCTACAAAGTCAACATGATCCCAATCATGTTTTGTAGGCGTCACTTGCCAAATGCCTTTTTGaa > 2:2739921/1‑91 (MQ=255) gcgcACTGTATCAGAACTGTCTTGTCCTACAAAGTCAACATGATCCCAATCATGTTTTGTAGGCGTCACTTGCCAAATGCCTTTTTGAAtt > 2:3426870/1‑91 (MQ=255) cACTGTATCAGAACTGTCTTGTCCTACAAAGTCAACATGATCCCAATCATGTTTTGTAGGCGTCACTTGCCAAATGCCTTTTTGAATTTTa < 2:657813/91‑1 (MQ=255) aCTGTATCAGAACTGTCTTGTCCTACAAAGTCAACATGATCCCAATCATGTTTTGTAGGCGTCACTTGCCAAATGCCTTTTTGAATTTTAt > 2:1778759/1‑91 (MQ=255) cTGTATCAGAACTGTCTTGTCCTACAAAGTCAACATGATCCCAATCATGTTTTGTAGGCGTCACTTGCCAAATGCCTTTTTGAATTTTATc > 1:2261352/1‑91 (MQ=255) tGTATCAGAACTGTCTTGTCCTACAAAGTCAACATGATCCCAATCATGTTTTGTAGGCGTCACTTGCCAAATGCCTTTTTGAATTTTATCt < 2:3798035/91‑1 (MQ=255) tGTATCAGAACTGTCTTGTCCTACAAAGTCAACATGATCCCAATCATGTTTTGTAGGCGTCACTTGCCAAATGCCTTTTTGAATTTTATCt > 2:1973350/1‑91 (MQ=255) tGTATCAGAACTGTCTTGTCCTACAAAGTCAACATGATCCCAATCATGTTTTGTAGGCGTCACTTGCCAAATGCCTTTTTGAATTTTATCt < 2:2275935/91‑1 (MQ=255) gTATCAGAACTGTCTTGTCCTACAAAGTCAACATGATCCCAATCATGTTTTGTAGGCGTCACTTGCCAAATGCCTTTTTGAATTTTATCTg > 1:3209254/1‑91 (MQ=255) tATCAGAACTGTGTTGTCCTACAAAGTCAACATGATCCCAATCATGTTTTGTAGGCGTCACTTGCCAAATGCCTTTTTGAATTTTATCTGt < 2:3225950/91‑1 (MQ=255) tATCAGAACTGTCTTGTCCTACAAAGTCAACATGATCCCAATCATGTTTTGTAGGCGTCACTTGCCAAATGCCTTTTTGAATTTTATCTGt < 2:1619656/91‑1 (MQ=255) tATCAGAACTGTCTTGTCCTACAAAGTCAACATGATCCCAATCATGTTTTGTAGGCGTCACTTGCCAAATGCCTTTTTGAATTTTATCTGt > 1:2449167/1‑91 (MQ=255) tCAGAACTGTCTTGTCCTACAAAGTCAACATGATCCCAATCATGTTTTGTAGGCGTCACTTGCCAAATGCCTTTTTGAATTTTATCTGTCg > 1:2628581/1‑91 (MQ=255) tCAGAACTGTCTTGTCCTACAAAGTCAACATGATCCCAATCATGTTTTGTAGGCGTCACTTGCCAAATGCCTTTTTGAATTTTATCTGTCg < 1:3627493/91‑1 (MQ=255) aGAACTGTCTTGTCCTACAAAGTCAACATGATCCCAATCATGTTTTGTAGGCGTCACTTGCCAAATGCCTTTTTGAATTTTATCTGTCGCt < 1:2278971/91‑1 (MQ=255) aGAACTGTCTTGTCCTACAAAGTCAACATGATCCCAATCATGTTTTGTAGGCGTCACTTGCCAAATGCCTTTTTGAATTTTATCTGTCGCt > 2:249425/1‑91 (MQ=255) aCTGTCTTGTCCTACAAAGTCAACATGATCCCAATCATGTTTTGTAGGCGTCACTTGCCAAATGCCTTTTTGAATTTTATCTGTCGCtttt > 2:3306133/1‑91 (MQ=255) aCTGTCTTGTCCTACAAAGTCAACATGATCCCAATCATGTTTTGTAGGCGTCACTTGCCAAATGCCTTTTTGAATTTTATCTGTCGCtttt < 2:3131188/91‑1 (MQ=255) aCTGTCTTGTCCTACAAAGTCAACATGATCCCAATCATGTTTTGTAGGCGTCACTTGCCAAATGCCTTTTTGAATTTTATCTGTCGCtttt < 2:2358898/91‑1 (MQ=255) aCTGTCTTGTCCTACAAAGTCAACATGATCCCAATCATGTTTTGTAGGCGTCACTTGCCAAATGCCTTTTTGAATTTTATCTGTCGCtttt > 1:681737/1‑91 (MQ=255) aCTGTCTTGTCCTACAAAGTCAACATGATCCCAATCATGTTTTGTAGGCGTCACTTGCCAAATGCCTTTTTGAATTTTATCTGTCGCtttt < 1:79804/91‑1 (MQ=255) tGTCTTGTCCTACAAAGTCAACATGATCCCAATCATGTTTTGTAGGCGTCACTTGCCAAATGCCTTTTTGAATTTTATCTGTCGCTTTTGt > 1:3342156/1‑91 (MQ=255) tGTCTTGTCCTACAAAGTCAACATGATCCCAATCATGTTTTGTAGGCGTCACTTGCCAAATGCCTTTTTGAATTTTATCTGTCGCTTTTGt < 1:1306822/91‑1 (MQ=255) gTCTTGTCCTACAAAGTCAACATGATCCCAATCATGTTTTGTAGGCGTCACTTGCCAAATGCCTTTTTGAATTTTATCTGTCGCTTTTGta > 1:2595262/1‑91 (MQ=255) gTCTTGTCCTACAAAGTCAACATGATCCCAATCATGTTTTGTAGGCGTCACTTGCCAAATGCCTTTTTGAATTTTATCTGTCGCTTTTGta < 2:1679553/91‑1 (MQ=255) tCTTGTCCTACAAAGTCAACATGATCCCAATCATGTTTTGTAGGCGTCACTTGCCAAATGCCTTTTTGAATTTTATCTGTCGCTTTTGtat > 2:131717/1‑91 (MQ=255) gTCCTACAAAGTCAACATGATCCCAATCATGTTTTGTAGGCGTCACTTGCCAAATGCCTTTTTGAATTTTATCTGTCGCTTTTGTATAAGc > 2:2299293/1‑91 (MQ=255) gTCCTACAAAGTCAACATGATCCCAATCATGTTTTGTAGGCGTCACTTGCCAAATGCCTTTTTGAATTTTATCTGTCGCTTTTGTATAAGc > 1:3701187/1‑91 (MQ=255) gTCCTACAAAGTCAACATGATCCCAATCATGTTTTGTAGGCCTCACTTGCCAAATGCCTTTTTGAATTTTATCTGTCGCTTTTGTATAAGc > 2:2949568/1‑91 (MQ=255) tCCTACAAAGTCAACATGATCCCAATCATGTTTTGTAGGCGTCACTTGCCAAATGCCTTTTTGAATTTTATCTGTCGCTTTTGTATAAGCt < 2:210849/91‑1 (MQ=255) ccTACAAAacatgattgggatcatgttgactttgtaggacaagacagttctgatacagtgcgcacaagagaagaattacaagatttttggc < 2:2561477‑M1/91‑84 (MQ=255) cTACAAAacatgattgggatcatgttgactttgtaggacaagacagttctgatacagtgcgcacaagagaagaattacaagatttttggca < 1:1723483‑M1/91‑85 (MQ=255) cTACAAAGTCAACATGATCCCAATCATGTtttgtaggacaagacagttctgatacagtgcgcacaagagaagaattacaagatttttagca < 1:3003648‑M2/91‑63 (MQ=255) tACAAAGTCAACATGATCCCAATCATGTtttgtaggacaagacagttctgatacagtgcgcacaagagaagaattacaagatttttggcat < 1:2850618‑M2/91‑64 (MQ=255) tACAAAGTCAACATGATCCCAATCATGTTTTGTAGGCGTCACTTGCCAAATGCCTTTTTGAATTTTATCTGTCGCTTTTGTATAAGCTTGa > 2:3073429/1‑91 (MQ=255) tACAAAGTCAACATGATCCCAATCATGTTTTGTAGGCGTCACTTGCCAAATGCCTTTTTGAATTTTATCTGTCGCTTTTGTATAAGCTTGa < 1:1198149/91‑1 (MQ=255) aCAAAGTCAACATGATCCCAATCATGTTTTGTAGGCGTCACTTGCCAAATGCCTTTTTGAATTTTATCTGTCGCTTTTGTATAAGCTTGAt < 2:3251248/91‑1 (MQ=255) aCAAAGTCAACATGATCCCAATCATGTTTTGTAGGCGTCACTTGCCAAATGCCTTTTTGAATTTTATCTGTCGCTTTTGTATAAGCTTGAt > 1:3055710/1‑91 (MQ=255) aCAAAGTCAACATGATCCCAATCATGTTTTGTAGGCGTCACTTGCCAAATGCCTTTTTGAATTTTATCTGTCGCTTTTGTATAAGCTAGAt > 1:3494242/1‑91 (MQ=255) cAAAacatgattgggatcatgttgactttgtaggacaagacagttctgatacagtgcgcacaagagaagaattacaagatttttggcatca < 1:3634052‑M1/91‑88 (MQ=255) cAAAGTCAACATGATCCCAATCATGTTTTGTAGGCGTCACTTGCCAAATGCCTTTTTGAATTTTATCTGTCGCTTTTGTATAAGCTTGAtt < 1:1828483/91‑1 (MQ=255) aaaGTCAACATGATCCCAATCATGTtttgtaggacaagacagttctgatacagtgcgcacaagagaagaattacaagatttttggcatcat < 1:2891327‑M2/91‑67 (MQ=255) aaaGTCAACATGATCCCAATCATGTTTTGTAGGCGTCACTTGCCAAATGCCTTTTTGAATTTTATCTGTCGCTTTTGTATAAGCTTGATTa > 1:2128621/1‑91 (MQ=255) aaaGTCAACATGATCCCAATCATGTTTTGTAGGCGTCACTTGCCAAATGCCTTTTTGAATTTTATCTGTCGCTTTTGTATAAGCTTGATTa > 1:3813947/1‑91 (MQ=255) aaaGTCAACATGATCCCAATCATGTTTTGTAGGCGTCACTTGCCAAATGCCTTTTTGAATTTTATCTGTCGCTTTTGTATAAGCTTGATTa < 2:2763492/91‑1 (MQ=255) aaaGTCAACATGATCCCAATCATGTTTTGTAGGCGTCACTTGCCAAATGCCTTTTTGAATTTTATCTGTCGCTTTTGTATAAGCTTGATTa > 2:2036995/1‑91 (MQ=255) aaGTCAACATGATCCCAATCATGTtttgtaggacaagacagttctgatacagtgcgcacaagagaagaattacaagatttttggcatcatt < 2:691795‑M2/91‑68 (MQ=255) aaGTCAACATGATCCCAATCATGTtttgtaggacaagacagttctgatacagtgcgcacaagagaagaattacaagatttttggcatcatt < 2:692955‑M2/91‑68 (MQ=255) aaGTCAACATGATCCCAATCATGTTTTGTAGGCGTCACTTGCCAAATGCCTTTTTGAATTTTATCTGTCGCTTTTGTATAAGCTTGATTaa < 2:1729559/91‑1 (MQ=255) | CAGTTTTCACTAAATCGTCTGCTAAATGATGCCAAAAATCTTGTAATTCTTCTCTTGTGCGCACTGTATCAGAACTGTCTTGTCCTACAAAGTCAACATGATCCCAATCATGTTTTGTAGGCGTCACTTGCCAAATGCCTTTTTGAATTTTATCTGTCGCTTTTGTATAAGCTTGATTAA > USA300TCH1516_ALE/2830648‑2830827 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |