| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | 68500 = | NA (NA) | 7 (0.040) | 7/154 | NT | 5.7% | coding (616/852 nt) | USA300TCH1516_00061 | hypothetical protein |
| ? | USA300TCH1516_ALE | 68542 = | 120 (0.630) | coding (658/852 nt) | USA300TCH1516_00061 | hypothetical protein | |||||
Only 100 of 172 total aligned reads displayed.
AGCGTTTATACATCTTATGCTTATTATCAATTGTGCGAAGAAAAAGGCATTATCAGAAGTATGTCCCGAAAGGGAACACCTGCCGATAACGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGAGCTTAATCACTCTAATCACATTGTAATAGATA > USA300TCH1516_ALE/68452‑68632 | gtaaaaagtttcagactttagcgaggaatggaaactttctatcggggcgttatcggcaggtgttccctttcgggacatacttctgataatg < 1:1149860‑M2/1‑1 (MQ=255)gtaaaaagtttcagactttagcgaggaatggaaactttctatcggggcgttatcggcaggtgttccctttcgggacatacttctgataatg < 2:1331629‑M2/1‑1 (MQ=255)gtaaaaagtttcagactttagcgaggaatggaaactttctatcggggcgttatcggcaggtgttccctttcgggacatacttctgataatg < 2:2097792‑M2/1‑1 (MQ=255) taaaaagtttcagactttagcgaggaatggaaactttctatcggggcgttatcggcaggtgttccctttcgggacatacttctgataatGc < 2:2920760‑M2/2‑1 (MQ=255) taaaaagtttcagactttagcgaggaatggaaactttctatcggggcgttatcggcaggtgttccctttcgggacatacttctgataatGc > 2:1204070‑M2/90‑91 (MQ=255) taaaaagtttcagactttagcgaggaatggaaactttctatcggggcgttatcggcaggtgttccctttcgggacatacttctgataatGc < 2:1396487‑M2/2‑1 (MQ=255) taaaaagtttcagactttagcgaggaatggaaactttctatcggggcgttatcggcaggtgttccctttcgggacatacttctgataatGc < 2:695463‑M2/2‑1 (MQ=255) taaaaagtttcagactttagcgaggaatggaaactttctatcggggcgttatcggcaggtgttccctttcgggacatacttctgataatGc < 1:1608832‑M2/2‑1 (MQ=255) taaaaagtttcagactttagcgaggaatggaaactttctatcggggcgttatcggcaggtgttccctttcgggacatacttctgataatGc < 1:1871542‑M2/2‑1 (MQ=255) aaaaagtttcagactttagcgaggaatggaaactttctatcggggcgttatcggcaggtgttccctttcgggacatacttctgataatGcc > 1:2480397‑M2/89‑91 (MQ=255) aaaaagtttcagactttagcgaggaatggaaactttctatcggggcgttatcggcaggtgttccctttcgggacatacttctgataatGcc < 1:522905‑M2/3‑1 (MQ=255) aaaaagtttcagactttagcgaggaatggaaactttctatcggggcgttatcggcaggtgttccctttcgggacatacttctgataatGcc < 1:3227217‑M2/3‑1 (MQ=255) aaaaagtttcagactttagcgaggaatggaaactttctatcggggcgttatcggcaggtgttccctttcgggacatacttctgataatGcc < 2:1587839‑M2/3‑1 (MQ=255) aaaaagtttcagactttagcgaggaatggaaactttctatcggggcgttatcggcaggtgttccctttcgggacatacttctgataatGcc < 2:2544973‑M2/3‑1 (MQ=255) aaaaagtttcagactttagcgaggaatggaaactttctatcggggcgttatcggcaggtgttccctttcgggacatacttctgataatGcc < 2:2544865‑M2/3‑1 (MQ=255) gTTTATACATCTTATGCTTATTATCAATTGTGCGAAGAAAAAGGCATTATCAGAAGTATGTCCCGAAAGGGAACACCTGCCGATAACGccc < 1:1208/91‑1 (MQ=34) tttATACATCTTATGCTTATTATCAATTGTGCGAGGAAAAAGGCATTATCAGAAGTATGTCCCGAAAGGGAACACCTGCCGATAACGcccc < 2:1440810/91‑1 (MQ=18) ttATACATCTTATGCTTATTATCAATTGTGCGAAGAAAAAGGCATTATCAGAAGTATGTCCCGAAAGGGAACACCTGCCGATAACGCCCCg > 1:2327400/1‑91 (MQ=34) ataCATCTTATGCTTATTATCAATTGTGCGAAGAAAAAGGCATTATCAGAAGTATGTCCCGAAAGGGAACACCTGCCGATAACGCCCCGAt < 1:3420997/91‑1 (MQ=34) ataCATCTTATGCTTATTATCAATTGTGCGAAGAAAAAGGCATTATCAGAAGTATGTCCCGAAAGGGAACACCTGCCGATAACGCCCCGAt < 1:3420996/91‑1 (MQ=34) taCATCTTATGCTTATTATCAATTGTGCGAAGAAAAAGGCATTATCAGAAGTATGTCCCGAAAGGGAACACCTGCCGATAACGCCACGATa > 2:3567970/1‑91 (MQ=21) aCATCTTATGCTTATTATCAATTGTGCGAAGAAAAAGGCATTATCAGAAGTATGTCCCGAAAGGGAACACCTGCCGATAACGCCCCGATAg < 1:2289670/91‑1 (MQ=34) cATCTTATGCTTATTATCAATTGTGCGAAGAAAAAGGCATTATCAGAAGTATGTCCCGAAAGGGAACACCTGCCGATAACGCCCCGATAGa > 2:3545221/1‑91 (MQ=34) cATCTTATGCTTATTATCAATTGTGCGAAGAAAAAGGCATTATCAGAAGTATGTCCCGAAAGGGAACACCTGCCGATAACGCCCCGATAGa < 1:3321939/91‑1 (MQ=34) aTCTTATGCTTATTATCAATTGTGCGAAGAAAAAGGCATTATCAGAAGTATGTCCCGAAAGGGAACACCTGCCGATAACGCCCCGATAGaa < 2:281926/91‑1 (MQ=34) tCTTATGCTTATTATCAATTGTGCGAAGAAAAAGGCATTATCAGAAGTATGTCCCGAAAGGGAACACCTGCCGATAACGCCCCGATAGaaa > 1:896947/1‑91 (MQ=34) tCTTATGCTTATTATCAATTGTGCGAAGAAAAAGGCATTATCAGAAGTATGTCCCGAAAGGGAACACCTGCCGATAACGCCCCGATAGaaa > 2:1264487/1‑91 (MQ=34) tCTTATGCTTATTATCAATTGTGCGAAGAAAAAGGCATTATCAGAAGTATGTCCCGAAAGGGAACACCTGCCGATAACGCCCCGATAGaaa < 2:1560435/91‑1 (MQ=34) cTTATGCTTATTATCAATTGTGCGAAGAAAAAGGCATTATCAGAAGTATGTCCCGAAAGGGAACACCTGCCGATAACGCCCCGATAGAAAg > 1:3332553/1‑91 (MQ=34) tATGCTTATTATCAATTGTGCGAAGAAAAAGGCATTATCAGAAGTATGTCCCGAAAGGGAACACCTGCCGATAACGCCCCGATAGAAAGtt < 1:3690300/91‑1 (MQ=33) gCTTATTATCAATTGTGCGAAGAAAAAGGCATTATCAGAAGTATGTCCCGAAAGGGAACACCTGCCGATAACGCCCCGATAGAAAGTTTcc < 1:66851/91‑1 (MQ=34) gCTTATTATCAATTGTGCGAAGAAAAAGGCATTATCAGAAGTATGTCCCGAAAGGGAACACCTGCCGATAACGCCCCGATAGAAAGTCTcc > 2:1055336/1‑91 (MQ=21) cTTATTATCAATTGTGCGAAGAAAAAGGCATTATCAGAAGTATGTCCCGAAAGGGAACACCTGCCGATAACGCCCCGATAGAAAGTTTCCa < 2:569369/91‑1 (MQ=34) ttattaTCAATTGTGCGAAGAAAAAGGCATTATCAGAAGTATGTCCCGAAAGGGAACACCTGCCGATAACGCCCCGATAGAAAGTTTCCAt > 2:2467458/1‑91 (MQ=34) ttattaTCAATTGTGCGAAGAAAAAGGCATTATCAGAAGTATGTCCCGAAAGGGAACACCTGCCGATAACGCCCCGATAGAAAGTTTCCAt > 2:3344155/1‑91 (MQ=34) tattatCAATTGTGCGAAGAAAAAGGCATTATCAGAAGTATGTCCCGAAAGGGAACACCTGCCGATAACGCCCCGATAGAAAGTTTCCAtt > 2:2430203/1‑91 (MQ=34) attatCAATTGTGCGAAGAAAAAGGCATTATCAGAAGTATGTCCCGAAAGGGAACACCTGCCGATAACGCCCCGATAGAAAGTTTCCATTc < 2:3502744/91‑1 (MQ=34) tatCAATTGTGCGAAGAAAAAGGCATTATCAGAAGTATGTCCCGAAAGGGAACACCTGCCGATAACGCCCCGATAGAAAGTTTCCATTCCt < 1:1858497/91‑1 (MQ=34) atCAATTGTGCGAAGAAAAAGGCATTATCAGAAGTATGTCCCGAAAGGGAACACCTGCCGATAACGCCCCGATAGAAAGTTTCCATTCCTc < 1:1754948/91‑1 (MQ=34) atCAATTGTGCGAAGAAAAAGGCATTATCAGAAGTATGTCCCGAAAGGGAACACCTGCCGATAACGCCCCGATAGAAAGTTTCCATTCCTc < 1:3395608/91‑1 (MQ=34) tCAATTGTGCGAAGAAAAAGGCATTATCAGAAGTATGTCCCGAAAGGGCACACCTGCCGATAACGCCCCGATAGAAAGTTTCCATTCCTCg > 1:587026/1‑91 (MQ=18) tCAATTGTGCGAAGAAAAAGGCATTATCAGAAGTATGTCCCGAAAGGGAACACCTGCCGATAACGCCCCGATAGAAAGTTTCCATTCCTCg < 1:2863694/91‑1 (MQ=34) tCAATTGTGCGAAGAAAAAGGCATTATCAGAAGTATGTCCCGAAAGGGAACACCTGCCGATAACGCCCCGATAGAAAGTTTCCATTCCTCg > 1:65154/1‑91 (MQ=34) cAATTGTGCGAAGAAAAAGGCATTATCAGAAGTATGTCCCGAAAGGGAACACCTGCCGATAACGCCCCGATAGAAAGTTTCCATTCCTCGc > 1:2095734/1‑91 (MQ=34) cAATTGTGCGAAGAAAAAGGCATTATCAGAAGTATGTCCCGAAAGGGAACACCTGCCGATAACGCCCCGATAGAAAGTTTCCATTCCTCGc < 1:1826323/91‑1 (MQ=33) aaTTGTGCGAAGAAAAAGGCATTATCAGAAGTATGTCCCGAAAGGGAACACCTGCCGATAACGCCCCGATAGAAAGTTTCCATTCCTCGCt < 2:1223286/91‑1 (MQ=33) aTTGTGCGAAGAAAAAGGCATTATCAGAAGTATGTCCCGAAAGGGAACACCTGCCGATAACGCCCCGATAGAAAGTTTCCATTCCTCGCTa > 1:1069458/1‑91 (MQ=34) aTTGTGCGAAGAAAAAGGCATTATCAGAAGTATGTCCCGAAAGGGAACACCTGCCGATAACGCCCCGATAGAAAGTTTCCATTCCTCGCTa > 1:2019940/1‑91 (MQ=33) aTTGTGCGAAGAAAAAGGCATTATCAGAAGTATGTCCCGAAAGGGAACACCTGCCGATAACGCCCCGATAGAAAGTTTCCATTCCTCGCTa > 1:3545104/1‑91 (MQ=34) ttGTGCGAAGAAAAAGGCATTATCAGAAGTATGTCCCGAAAGGGAACACCTGCCGATAACGCCCCGATAGAAAGTTTCCATTCCTCGCTaa < 1:3156725/91‑1 (MQ=33) tcggggcgttattggcaggtgttccctttcgggacatacttctgataatGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACt < 1:952527‑M2/42‑1 (MQ=255) ggcgttatcggcaggtgttccctttcgggacatacttctgataatGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACttttt > 2:630718‑M2/46‑91 (MQ=255) tatcggcaggtgttccctttcgggacatacttctgataatGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATc > 1:1199442‑M2/41‑91 (MQ=255) aGTATGTCCCGAAAGGGAACACCTGCCGATAACGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATg > 1:1197604/1‑91 (MQ=31) gTATGTCCCGAAAGGGAACACCTGCCGATAACGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGa > 1:1634381/1‑91 (MQ=32) tATGTCCCGAAAGGGAACACCTGCCGATAACGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGAg < 2:3807766/91‑1 (MQ=33) aTGTCCCGAAAGGGAACACCTGCCGATAACGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGAGc < 1:566510/91‑1 (MQ=34) aTGTCCCGAAAGGGAACACCTGCCGATAACGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGAGc < 1:2950600/91‑1 (MQ=34) tGTCCCGAAAGGGAACACCTGCCGATAACGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGAGCt > 1:1359182/1‑91 (MQ=34) tGTCCCGAAAGGGAACACCTGCCGATAACGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGAGCt < 1:1636501/91‑1 (MQ=34) tGTCCAGAAAGGGAACACCTGCCGATAACGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGAGCt < 2:3138851/91‑1 (MQ=21) cccGAAAGGGAACACCTGCCGATAACGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGAGCTTaa < 2:1113940/91‑1 (MQ=34) cccGAAAGGGAACACCTGCCGATAACGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGAGCTTaa < 1:2115875/91‑1 (MQ=34) ccGAAAGGGAACACCTGCCGATAACGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGAGCTTAAt > 1:155083/1‑91 (MQ=34) gAAAGGGAACACCTGCCGATAACGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGAGCTTAATCa < 1:3301380/91‑1 (MQ=37) gAAAGGGAACACCTGCCGATAACGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGAGCTTAATCa < 1:2182411/91‑1 (MQ=37) aaGGGAACACCTGCCGATAACGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGAGCTTAATCAct > 2:3245469/1‑91 (MQ=38) gggAACACCTGCCGATAACGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGAGCTTAATCActct < 2:3851115/91‑1 (MQ=39) gggAACACCTGCCGATAACGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGAGCTTAATCActct < 2:2371423/91‑1 (MQ=39) ggAACACCTGCCGATAACGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGAGCTTAATCACTCTa > 1:2302908/1‑91 (MQ=39) ggAACACCTGCCGATAACGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGAGCTTAATCACTCTa < 2:2426194/91‑1 (MQ=39) gAACACCTGCCGATAACGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGAGCTTAATCACTCTaa > 2:3058955/1‑91 (MQ=39) gAACACCTGCCGATAACGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGAGCTTAATCACTCTaa > 1:600174/1‑91 (MQ=39) gAACACCTGCCGATAACGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGAGCTTAATCACTCTaa < 2:614141/91‑1 (MQ=39) aaCACCTGCCGATAACGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGAGCTTAATCACTCTAAt > 1:1182161/1‑91 (MQ=39) aaCACCTGCCGATAACGCCCCGATAGAAAGTTTCCATTCATCGCTAAAGTCTGAAACTTTTTACATCAATAATGAGCTTAATCACTCTAAt > 1:3084825/1‑91 (MQ=37) acacCTGCCGATAACGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGAGCTTAATCAGTCTAATc > 2:3453614/1‑91 (MQ=255) acacCTGCCGATAACGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGAGCTTAATCACTCTAATc > 1:2504121/1‑91 (MQ=39) acacCTGCCGATAACGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGAGCTTAATCACTCTAATc > 1:484903/1‑91 (MQ=39) acacCTGCCGATAACGCCCCGATAGAAAGTTACCATTCCTCGCTAAAGTCTGAAACTTTTTACATCATCAATGAGCTTAGTCACTCTAATc > 2:2951342/1‑91 (MQ=11) acCTGCCGATAACGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGAGCTTAATCACTCTAATcac > 2:3655406/1‑91 (MQ=38) ccTGCCGATAACGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAGTAATGAGCTTAATCACTCTAATcaca < 2:3220979/91‑1 (MQ=255) ccTGCCGATAACGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGAGCTTAATCACTCTAATcaca < 2:850437/91‑1 (MQ=255) cttctgataatGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGAGCTTAATCACTCTAATCACAt < 1:630718‑M2/80‑1 (MQ=255) cTGCCGATAACGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGAGCTTAATCACTCTAATCACAt < 1:2802257/91‑1 (MQ=255) tGCCGATAACGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGAGCTTAATCACTCTAATCACAtt > 2:1222945/1‑91 (MQ=255) gCCGATAACGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGAGCTTAATCACCCTAATCACATTg > 2:3228381/1‑91 (MQ=255) ccGATAACGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGAGCTTAATCACTCTAATCACATTGt > 1:386158/1‑91 (MQ=255) cGATAACGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGAGCTTAATCACTCTAATCACATTGTa > 2:2199658/1‑91 (MQ=255) cGATAACGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGAGCTTAATCACTCTAATCACATTGTa > 2:1814682/1‑91 (MQ=255) gATAACGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTCTTACATCAATAATGAGCTTAATCACTCTAATCACATTGTaa > 2:3400143/1‑91 (MQ=255) tAACGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGAGCTTAATCACTCTAATCACATTGTAATa < 1:3208890/91‑1 (MQ=255) tAACGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGAGCTTAATCACTCTAATCACATTGTAATa < 1:2783655/91‑1 (MQ=255) tAACGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGAGCTTAATCACTCTAATCACATTGTAATa < 1:2783461/91‑1 (MQ=255) tAACGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGAGCTTAATCACTCTAATCACATTGTAATa < 2:762728/91‑1 (MQ=255) aCGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGAGCTTAATCACTCTAATCACATTGTAATAGa < 2:1508873/91‑1 (MQ=255) aCGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGAGCTTAATCACTCTAATCACATTGTAATAGa > 1:3143644/1‑91 (MQ=255) cGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGAGCTTAATCACTCTAATCACATTGTAATAGat < 2:1963354/91‑1 (MQ=255) cGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGAGCTTAATCACTCTAATCACATTGTAATAGat < 2:1963364/91‑1 (MQ=255) GCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGAGCTTAATCACTCTAATCACATTGTAATAGata > 1:1070990‑M2/1‑91 (MQ=255) | AGCGTTTATACATCTTATGCTTATTATCAATTGTGCGAAGAAAAAGGCATTATCAGAAGTATGTCCCGAAAGGGAACACCTGCCGATAACGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGAGCTTAATCACTCTAATCACATTGTAATAGATA > USA300TCH1516_ALE/68452‑68632 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |