| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | 414290 = | 183 (0.960) | 16 (0.090) | 8/148 | NT | 8.4% | intergenic (‑32/‑632) | metI/spo0C | Cystathionine gamma‑synthase/O‑acetylhomoserine (thiol)‑lyase/Chromosome‑partitioning protein Spo0J |
| ? | USA300TCH1516_ALE | 414341 = | 181 (1.030) | intergenic (‑83/‑581) | metI/spo0C | Cystathionine gamma‑synthase/O‑acetylhomoserine (thiol)‑lyase/Chromosome‑partitioning protein Spo0J | |||||
Only 100 of 250 total aligned reads displayed.
TCCTTCATATTAAGACCCTCCTATAAGAAAAAATAAAAAAAGCTTCCGTCCTTCGTACCCGAATGAATCGGATAAAAAGGACGAAAGCTTATGTTTCGCGGTACCACCTTTATTTGTTATTCCATCGCTGAAATAACCTTATTCAGTACGCATTAAAAGTAAATATGCTTACTGAACAATT > USA300TCH1516_ALE/414251‑414431 | cTTCATATTAAGACCCTCCTATAAGAAAAAATAAAAAAAGCTTCCGTCCTTCGTACCCGAATGAATCGGATAAAAAGGACGAAAGCTTATg > 2:194179/1‑91 (MQ=255) cTTCATATTAAGACCCTCCTAAAAGAAAAAATAAAAAAAGCTTCCGTCCTTCGTACCCGAATGAATCGGATAAAAAGGACGAAAGCTTATg < 2:1951953/91‑1 (MQ=255) ttCATATTAAGACCCTCCTATAAGAAAAAATAAAAAAAGCTTCCGTCCTTCGTACCCGAATGAATCGGATAAAAAGGACGAAAGCTTATGt < 1:1055641/91‑1 (MQ=255) atatTAAGACCCTCCTATAAGAAAAAATAAAAAAAGCTTCCGTCCTTCGTACCCGAATGAATCGGATAAAAAGGACGAAAGCTTATGTTTc > 1:672685/1‑91 (MQ=255) atatTAAGACCCTCCTATAAGAAAAAATAAAAAAAGCTTCCGTCCTTCGTACCCGAATGAATCGGATAAAAAGGACGAAAGCTTATGTTTc > 2:3724418/1‑91 (MQ=255) tatTAAGACCCTCCTATAAGAAAAAATAAAAAAAGCTTCCGTCCTTCGTACCCGAATGAATCGGATAAAAAGGACGAAAGCTTATGTTTcg > 2:198723/1‑91 (MQ=255) tatTAAAACCCTCCTATAAGAAAAAATAAAAAAAGCTTCCGTCCTTCGTACCCGAATGAATCGGATAAAAAGGACGAAAGCTTATGTTTcg > 2:2998208/1‑91 (MQ=255) ttAAGACCCTCCTATAAGAAAAAATAAAAAAAGCTTCCGTCCTTCGTACCCGAATGAATCGGATAAAAAGGACGAAAGCTTATGTTTcgcg > 1:1513684/1‑91 (MQ=255) tAAGACCCTCCTATAAGAAAAAATAAAAAAAGCTTCCGTCCTTCGTACCCGAATGAATCGGATAAAAAGGACGAAAGCTTATGTTTCGCgg > 1:2207254/1‑91 (MQ=255) aGACCCTCCTATAAGAAAAAATAAAAAAAGCTTCCGTCCTTCGTACCCGAATGAATCGGATAAAAAGGACGAAAGCTTATGTTTCGCGGTa > 2:1651539/1‑91 (MQ=255) aGACCCTCCTATAAGAAAAAATAAAAAAAGCTTCCGTCCTTCGTACCCGAATGAATCGGATAAAAAGGACGAAAGCTTATGTTTCGCGGTa > 1:3818828/1‑91 (MQ=255) cccTCCTATAAGAAAAAATAAAAAAAGCTTCCGTCCTTCGTACCCGAATGAATCGGATAAAAAGGACGAAAGCTTATGTTTCGCGGTacca < 1:1363702/91‑1 (MQ=255) cctcctATAAGAAAAAATAAAAAAAGCTTCCGTCCTTCGTACCCGAATGAATCGGATAAAAAGGACGAAAGCTTATGTTTCGCGGTaccac < 1:3038648/91‑1 (MQ=255) ctcctATAAGAAAAAATAAAAAAAGCTTCCGTCCTTCGTACCCGAATGAATCGGATAAAAAGGACGAAAGCTTATGTTTCGCGGTaccacc > 2:2910622/1‑91 (MQ=255) tcctATAAGAAAAAATAAAAAAAGCTTCCGTCCTTCGTACTCGAATGAATCGGATAAAAAGGACGAAAGCTTATGTTTCGCGGTACCACCt > 2:3186106/1‑91 (MQ=255) ctATAAGAAAAAATAAAAAAAGCTTCCGTCCTTCGTACCCGAATGAATCGGATAAAAAGGACGAAAGCTTATGTTTCGCGGTACCACCttt > 1:2023383/1‑91 (MQ=255) ctATAAGAAAAAATAAAAAAAGCTTCCGTCCTTCGTACCCGAATGAATCGGATAAAAAGGACGAAAGCTTATGTTTCGCGGTACCACCttt < 2:1014104/91‑1 (MQ=255) ctATAAGAAAAAATAAAAAAAGCTTCCGTCCTTCGTACCCGAATGAATCGGATAAAAAGGACGAAAGCTTATGTTTCGCGGTACCACCttt > 1:2658444/1‑91 (MQ=255) ctATAAGAAAAAATAAAAAAAGCTTCCGTCCTTCGTACCCGAATGAATCGGATAAAAAGGACGAAAGCTTATGTTTCGCGGTACCACCttt < 2:1526444/91‑1 (MQ=255) tataAGAAAAAATAAAAAAAGCTTCCGTCCTTCGTACCCGAATGAATCGGATAAAAAGGACGAAAGCTTATGTTTCGCGGTACCACCTTTa > 2:2542309/1‑91 (MQ=255) tataAGAAAAAATAAAAAAAGCTTCCGTCCTTCGTACCCGAATGAATCGGATAAAAAGGACGAAAGCTTATGTTTCGCGGTACCACCTTTa < 1:3171148/91‑1 (MQ=255) aGAAAAAATAAAAAAAGCTTCCGTCCTTCGTACCCGAATGAATCGGATAAAAAGGACGAAAGCTTATGTTTCGCGGTACCACCTTTATTTg > 1:800258/1‑91 (MQ=255) aGAAAAAATAAAAAAAGCTTCCGTCCTTCGTACCCGAATGAATCGGATAAAAAGGACGAAAGCTTATGTTTCGCGGTACCACCTTTATTTg > 1:1680696/1‑91 (MQ=255) aGAAAAAATAAAAAAAGCTTCCGTCCTTCGTACCCGAATGAATCGGATAAAAAGGACGAAAGCTTATGTTTCGCGGTACCACCTTTATTTg > 1:2347769/1‑91 (MQ=255) gAAAAAATAAAAAAAGCTTCCGTCCTTCGTACCCGAATGAATCGGATAAAAAGGACGAAAGCTTATGTTTCGCGGTACCACCTTTATTTGt < 1:1343613/91‑1 (MQ=255) gAAAAAATAAAAAAAGCTTCCGTCCTTCGTACCCGAATGAATCGGATAAAAAGGACGAAAGCTTATGTTTCGCGGTACCACCTTTATTTGt > 2:3114545/1‑91 (MQ=255) aaaaaaTAAAAAAAGCTTCCGTCCTTCGTACCCGAATGAATCGGATAAAAAGGACGAAAGCTTATGTTTCGCGGTACCACCTTTATTTGtt > 1:1961214/1‑91 (MQ=255) aaaaaaTAAAAAAAGCTTCCGTCCTTCGTACCCGAATGAATCGGATAAAAAGGACGAAAGCTTATGTTTCGCGGTACCACCTTTATTTGtt < 2:1720019/91‑1 (MQ=255) aaaaaaTAAAAAAAGCTTCCGTCCTTCGTACCCGAATGAATCGGATAAAAAGGACGAAAGCTTATGTTTCGCGGTACCACCTTTATTTGtt > 1:3119601/1‑91 (MQ=255) aaaaaaTAAAAAAAGCTTCCGTCCTTCGTACCCGAATGAATCGGATAAAAAGGACGAAAGCTTATGTTTCGCGGTACCACCTTTATTTGtt > 1:2621959/1‑91 (MQ=255) aaaaTAAAAAAAGCTTCCGTCCTTCGTACCCGAATGAATCGGATAAAAAGGACGAAAGCTTATGTTTCGCGGTACCACCTTTATTTGTTAt < 2:397600/91‑1 (MQ=255) aTAAAAAAAGCTTCCGTCCTTCGTACCCGAATGAATCGGATAAAAAGGACGAAAGCTTATGTTTCGCGGTACCACCTTTATTTGTTATTcc > 1:3562636/1‑91 (MQ=255) aTAAAAAAAGCTTCCGTCCTTCGTACCCGAATGAATCGGATAAAAAGGACGAAAGCTTATGTTTCGCGGTACCACCTTTATTTGTTATTcc > 2:699294/1‑91 (MQ=255) tAAAAAAAGCTTCCGTCCTTCGTACCCGAATGAATCGGATAAAAAGGACGAAAGCTTATGTTTCGCGGTACCACCTTTATTTGTTATTCCa > 2:613913/1‑91 (MQ=255) tAAAAAAAGCTTCCGTCCTTCGTACCCGAATGAATCGGATAAAAAGGACGAAAGCTTATGTTTCGCGGTACCACCTTTATTTGTTATTCCa > 1:408601/1‑91 (MQ=255) aaaaaaaGCTTCCGTCCTTCGTACCCGAATGAATCGGATAAAAAGGACGAAAGCTTATGTTTCGCGGTACCACCTTTATTTGTTATTCCAt > 2:2670324/1‑91 (MQ=255) aaaaaaaGCTTCCGTCCTTCGTACCCGAATGAATCGGATAAAAAGGACGAAAGCTTATGTTTCGCGGTACCACCTTTATTTGTTATTCCAt > 1:3744490/1‑91 (MQ=255) aaaaaaaGCTTCCGTCCTTCGTACCCGAATGAATCGGATAAAAAGGACGAAAGCTTATGTTTCGCGGTACCACCTTTATTTGTTATTCCAt > 1:1022445/1‑91 (MQ=255) aaaaaaGCTTCCGTCCTTCGTACCCGAATGAATCGGATAAAAAGGACGAAAGCTTATGTTTCGCGGTACCACCTTTATTTGTTATTCCATc > 1:2724266/1‑91 (MQ=255) aaaaaaGCTTCCGTCCTTCGTACCCGAATGAATCGGATAAAAAGGACGAAAGCTTATGTTTCGCGGTACCACCTTTATTTGTTATTCCATc > 1:3099224/1‑91 (MQ=255) aaaaaaGCTTCCGTCCTTCGTACCCGAATGAATCGGATAAAAAGGACGAAAGCTTATGTTTCGCGGTACCACCTTTATTTGTTATTCCATc > 2:2784183/1‑91 (MQ=255) aaaaaGCTTCCGTCCTTCGTACCCGAATGAATCGGATAAAAAGGACGAAAGCTTATGTTTCGCGGTACCACCTTTATTTGTTATTCCATCg < 2:1513684/91‑1 (MQ=255) aaaaaGCTTCCGTCCTTCGTACCCGAATGAATCGGATAAAAAGGACGAAAGCTTATGTTTCGCGGTACCACCTTTATTTGTTATTCCATCg > 2:1179309/1‑91 (MQ=255) aaaaaGCTTCCGTCCTTCGTACCCGAATGAATCGGATAAAAAGGACGAAAGCTTATGTTTCGCGGTACCACCTTTATTTGTTATTCCATCg > 1:2500536/1‑91 (MQ=255) aaaaGCTTCCGTCCTTCGTACCCGAATGAATCGGATAAAAAGGACGAAAGCTTATGTTTCGCGGTACCACCTTTATTTGTTATTCCATCGc > 2:1780356/1‑91 (MQ=255) aaaaGCTTCCGTCCTTCGTACCCGAATGAATCGGATAAAAAGGACGAAAGCTTATGTTTCGCGGTACCACCTTTATTTGTTATTCCATCGc < 1:2766717/91‑1 (MQ=255) aaaaGCTTCCGTCCTTCGTACCCGAATGAATCGGATAAAAAGGACGAAAGCTTATGTTTCGCGGTACCACCTTTATTTGTTATTCCATCGc < 1:1755637/91‑1 (MQ=255) aaaGCTTCCGTCCTTCGTACCCGAATGAATCGGATAAAAAGGACGAAAGCTTATGTTTCGCGGTACCACCTTTATTTGTTATTCCATCGCt < 1:3317228/91‑1 (MQ=255) aagctttcgtcctttttatccgattcattcgggtacgaaggacggaagcgtATGTTTCGCGGTACCACCTTTATTTGTTATTCCATCGCTg > 1:215895‑M2/52‑91 (MQ=255) AAGCTTCCGTCCTTCGTACCCGAATGAATCGGATAAAAAGGACGAAAGCTTATGTTTCGCGGTACCACCTTTATTTGTTATTCCATCGCTg > 2:796945‑M1/1‑91 (MQ=255) AAGCTTCCGTCCTTCGTACCCGAATGAATCGGATAAAAAGGACGAAAGCTTATGTTTCGCGGTACCACCTTTATTTGTTATTCCATCGCTg > 2:928330‑M1/1‑91 (MQ=255) GCTTCCGTCCTTCGTACCCGAATGAATCGGATAAAAAGGACGAAAGCTTATGTTTCGCGGTACCACCTTTATTTGTTATTCCATCGCTGaa < 1:810046‑M1/91‑1 (MQ=255) GCTTCCGTCCTTCGTACCCCAATGAATCGGATAAAAAGGACGAAAGCTTATGTTTCGCGGTACCACCTTTATTTGTTATTCCATCGCTGaa < 2:3388604‑M1/91‑1 (MQ=255) TTCCGTCCTTCGTACCCGAATGAATCGGATAAAAAGGACGAAAGCTTATGTTTCGCGGTACCACCTTTATTTGTTATTCCATCGCTGAAAt > 2:2829451‑M1/1‑91 (MQ=255) TCCGTCCTTCGTACCCGAATGAATCGGATAAAAAGGACGAAAGCTTATGTTTCGCGGTACCACCTTTATTTGTTATTCCATCGCTGAAATa < 2:1198541‑M1/91‑1 (MQ=255) ccGTCCTTCGTACCCGAATGAATCGGATAAAAAGGACGAAAGCTTATGTTTCGCGGTACCACCTTTATTTGTTATTCCATCGCTGAAATaa > 2:2071426/1‑91 (MQ=255) ccGTCCTTCGTACCCGAATGAATCGGATAAAAAGGACGAAAGCTTATGTTTCGCGGTACCACCTTTATTTGTTATTCCATCGCTGAAATaa < 2:2899845/91‑1 (MQ=255) cgtcctttttatccgattcattcgggtacgaaggacggaagcttATGTTTCGCGGTACCACCTTTATTTGTTATTCCATCGCTGAAATAAc > 1:1579713‑M2/45‑91 (MQ=255) cgtcctttttatccgattcattcgggtacgaaggacggaagcttATGTTTCGCGGTACCACCTTTATTTGTTATTCCATCGCTGAAATAAc > 2:2732789‑M2/45‑91 (MQ=255) gTCCTTCGTACCCGAATGAATCGGATAAAAAGGACGAAAGCTTATGTTTCGCGGTACCACCTTTATTTGTTATTCCATCGCTGAAATAAcc < 1:2268190/91‑1 (MQ=255) tCCTTCGTACCCGAATGAATCGGATAAAAAGGACGAAAGCTTATGTTTCGCGGTACCACCTTTATTTGTTATTCCATCGCTGAAATAACCt > 1:1418344/1‑91 (MQ=255) ctttttatccgattcattcgggtacgaaggacggaagcttATGTTTCGCGGTACCACCTTTATTTGTTATTCCATCGCTGAAATAACCTTa > 1:2116694‑M2/41‑91 (MQ=255) tttttatccgattcattcgggtacgaaggacggaagcttATGTTTCGCGGTACCACCTTTATTTGTTATTCCATCGCTGAAATAACCTTAt > 1:2374796‑M2/40‑91 (MQ=255) ttCGTACCCGAATGAATCGGATAAAAAGGACGAAAGCTTATGTTTCGCGGTACCACCTTTATTTGTTATTCCATCGCTGAAATAACCTTAt < 2:1316848/91‑1 (MQ=255) ttttatccgattcattcgggtacgaaggacggaagcttATGTTTCGCGGTACCACCTTTATTTGTTATTCCATCGCCGAAATAACCTTAtt > 1:3640872‑M2/39‑91 (MQ=255) tCGTACCCGAATGAATCGGATAAAAAGGACGAAAGCTTATGTTTCGCGGTACCACCTTTATTTGTTATTCCATCGCTGAAATAACCTTAtt > 1:2309354/1‑91 (MQ=255) tCGTACCCGAATGAATCGGATAAAAAGGACGAAAGCTTATGTTTCGCGGTACCACCTTTATTTGTTATTCCATCGCTGAAATAACCTTAtt > 2:2382792/1‑91 (MQ=255) tCGTACCCGAATGAATCGGATAAAAAGGACGAAAGCTTATGTTTCGCGGTACCACCTATATTTGTTATTCCATCGCTGAAATAACCTTAtt > 2:3541309/1‑91 (MQ=255) cGTACCCGGATGAATCGGATAAAAGGGACGAAAGCTTATGTTTCGCGGTACCACCTTTATTTGTTATTCCATCGCTGAAATAACCTTATTc < 2:3599340/91‑1 (MQ=255) cGTACCCGAATGAATCGGATAAAAAGGACGAAAGCTTATGTTTCGCGGTACCACCTTTATTTGTTATTCCATCGCTGAAATAACCTTATTc < 1:3454192/91‑1 (MQ=255) cGTACCCGAATGAATCGGATAAAAAGGACGAAAGCTTATGTTTCGCGGTACCACCTTTATTTGTTATTCCATCGCTGAAATAACCTTATTc < 1:3356011/91‑1 (MQ=255) gTACCCGAATGAATCGGATAAAAAGGACGAAAGCTTATGTTTCGCGGTACCACCTTTATTTGTTATTCCATCGCTGAAATAACCt > 2:1113744/1‑85 (MQ=255) gTACCCGAATGAATCGGATAAAAAGGACGAAAGCTTATGTTTCGCGGTACCACCTTTATTTGTTATTCCATCGCTGAAATAACCTTATTCa < 1:204292/91‑1 (MQ=255) gTACCCGAATGAATCGGATAAAAAGGACGAAAGCTTATGTTTCGCGGTACCACCTTTATTTGTTATTCCATCGCTGAAATAACCTTATTCa < 1:2675665/91‑1 (MQ=255) aCCCGAATGAATCGGATAAAAAGGACGAAAGCTTATGTTTCGCGGTACCACCTTTATTTGTTATTCCATCGCTGAAATAACCTTATTCAGt > 2:2512401/1‑91 (MQ=255) aCCCGAATGAATCGGATAAAAAGGACGAAAGCTTATGTTTCGCGGTACCACCTTTATTTGTTATTCCATCGCTGAAATAACCTTATTCAGt < 2:2024136/91‑1 (MQ=255) aCCCGAATGAATCGGATAAAAAGGACGAAAGCTTATGTTTCGCGGTACCACCTTTATTTGTTATTCCATCGCTGAAATAACCTTATTCAGt < 1:2925660/91‑1 (MQ=255) aCCCGAATGAATCGGATAAAAAGGACGAAAGCTTATGTTTCGCGGTACCACCTTTATTTGTTATTCCATCGCTGAAATAACCTTATTCAGt < 1:3375853/91‑1 (MQ=255) ccGAATGAATCGGATAAAAAGGACGAAAGCTTATGTTTCGCGGTACCACCTTTATTTGTTATTCCATCGCTGAAATAACCTTATTCAGTAc < 1:367025/91‑1 (MQ=255) cGAATGAATCGGATAAAAAGGACGAAAGCTTATGTTTCGCGGTACCACCTTTATTTGTTATTCCATCGCTGAAATAACCTTATTCAGTACg > 1:1607472/1‑91 (MQ=255) gaatgaatCGGATAAAAAGGACGAAAGCTTATGTTTCGCGGTACCACCTTTATTTGTTATTCCATCGCTGAAATAACCTTATTCAGTACGc > 2:2481848/1‑91 (MQ=255) gaatgaatCGGATAAAAAGGACGAAAGCTTATGTTTCGCGGTACCACCTTTATTTGTTATTCCATCGCTGAAATAACCTTATTCAGTACGc < 1:2892118/91‑1 (MQ=255) gaatgaatCGGATAAAAAGGACGAAAGCTTATGTTTCGCGGTACCACCTTTATTTGTTATTCCATCGCTGAAATAACCTTATTCAGTACGc > 2:191482/1‑91 (MQ=255) atgaatCGGATAAAAAGGACGAAAGCTTATGTTTCGCGGTACCACCTTTATTTGTTATTCCATCGCTGAAATAACCTTATTCAGTACGCAt < 1:2124782/91‑1 (MQ=255) tgaatGGGATAAAAAGGACGAAAGCGTATGTTTCGCGGTACCACCTTTATTTGTTATTCCATCGCTGAAATAACCTTATTCAGTACGCAtt < 1:3615288/91‑1 (MQ=255) atCGGATAAAAAGGACGAAAGCTTATGTTTCGCGGTACCACCTTTATTTGTTATTCCATCGCTGAAATAACCTTATTCAGTACGCATTaaa < 2:3314421/91‑1 (MQ=255) tCGGATAAAAAGGACGAAAGCTTATGTTTCGCGGTACCACCTTTATTTGTTATTCCATCGCTGAAATAACCTTATTCAGTACGCATTaaaa < 2:1823591/91‑1 (MQ=255) aaaGGACGAAAGCTTATGTTTCGCGGTACCACCTTTATTTGTTATTCCATCGCTGAAATAACCTTATTCAGTACGCATTAAAAGTAAatat > 1:3161587/1‑91 (MQ=255) aaaGGACGAAAGCTTATGTTTCGCGGTACCACCTTTATTTGTTATTCCATCGCTGAAATAACCTTATTCAGTACGCATTAAAAGTAAatat > 1:3206268/1‑91 (MQ=255) aaGGACGAAAGCTTATGTTTCGCGGTACCACCTTTATTTGTTATTCCATCGCTGAAATAACCTTATTCAGTACGCATTAAAAGTAAATATg < 1:858590/91‑1 (MQ=255) aGGACGAAAGCTTATGTTTCGCGGTACCACCTTTATTTGTTATTCCATCGCTGAAATAACCTTATTCAGTACGCATTAAAAGTAAATATGc < 1:1129660/91‑1 (MQ=255) gACGAAAGCTTATGTTTCGCGGTACCACCTTTATTTGTTATTCCATCGCTGAAATAACCTTATTCAGTACGCATTAAAAGTAAATATGCtt < 2:136280/91‑1 (MQ=255) cGAAAGCTTATGTTTCGCGGTACCACCTTTATTTGTTATTCCATCGCTGAAATAACCTTATTCAGTACGCATTAAAAGTAAATATGCTTAc > 2:485320/1‑91 (MQ=255) cGAAAGCTTATGTTTCGCGGTACCACCTTTATTTGTTATTCCATCGCTGAAATAACCTTATTCAGTACGCATTAAAAGTAAATATGCTTAc < 1:125041/91‑1 (MQ=255) aaaGCTTATGTTTCGCGGTACCACCTTTATTTGTTATTCCATCGCTGAAATAACCTTATTCAGTACGCATTAAAAGTAAATATGCTTACTg < 1:485320/91‑1 (MQ=255) aagcttATGTTTCGCGGTACCACCTTTATTTGTTATTCCATCGCTGAAATAACCTTATTCAGTACGCATTAAAAGTAAATATGCTTACTGa > 2:3389319‑M2/7‑91 (MQ=255) aagcttATGTTTCGCGGTACCACCTTTATTTGTTATTCCATCGCTGAAATAACCTTATTCAGTACGCATTAAAAGTAAATATGCTTACTGa > 2:2347081‑M2/7‑91 (MQ=255) gcttATGTTTCGCGGTACCACCTTTATTTGTTATTCCATCGCTGAAATa > 2:3410500‑M2/5‑49 (MQ=255) cttATGTTTCGCGGTACCACCTTTATTTGTTATTCCATCGCTGAAATAACCTTATTCAGTACGCATTAAAAGTAAATATGCTTACTGAACa < 1:1881371‑M2/88‑1 (MQ=255) ttATGTTTCGCGGTACCACCTTTATTTGTTATTCCATCGCTGAAATAACCTTATTCAGTACGCATTAAAAGTAAATATGCTTACTGAACaa < 2:1576431‑M2/89‑1 (MQ=255) | TCCTTCATATTAAGACCCTCCTATAAGAAAAAATAAAAAAAGCTTCCGTCCTTCGTACCCGAATGAATCGGATAAAAAGGACGAAAGCTTATGTTTCGCGGTACCACCTTTATTTGTTATTCCATCGCTGAAATAACCTTATTCAGTACGCATTAAAAGTAAATATGCTTACTGAACAATT > USA300TCH1516_ALE/414251‑414431 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |