BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	USA300TCH1516_ALE	= 761262	168 (0.880)	13 (0.070)	9/148	NT	7.4%	coding (440/927 nt)	yciC_2	Putative metal chaperone YciC
*	?	USA300TCH1516_ALE	= 761280	168 (0.950)	13 (0.070)	9/148	NT	7.4%	coding (458/927 nt)	yciC_2	Putative metal chaperone YciC

Only 100 of 225 total aligned reads displayed.

GCCGATTATTTATGGTGTATTAGATGCGACTCGATTTTTAGAACGTCATCAATATACCGAAAATACAGTTTCGCTGATGGAAGATCAGTTGAAACTAAGTGACATGATTATTATTAATAAAATTGATCTTATAACTGATGACAGTCTTGAGAAAATTGATAAGCAATTAGGTATGATTTG  >  USA300TCH1516_ALE/761191‑761370

gCCGATTATTTATGGTGTATTAGATGCGACTCGATTTTTAGAACGTCATCAATATACCGAAAATACAGTTTCGCTGATGGAAGATCAGTTg                                                                                           >  1:1041928‑M2/1‑90 (MQ=255)

 ccGATTATTTATGGTGTATTAGATGCGACTCGATTTTTAGAACGTCATCAATATACCGAAAATACAGTTTCGCTGATGGAAGATCAGTTga                                                                                          >  1:3744963‑M2/1‑89 (MQ=255)

 ccGATTATTTATGGTGTATTAGATGCGACTCGATTTTTAGAACGTCATCAATATACCGAAAATACAGTTTCGCTGATGGAAGATCAGTTga                                                                                          >  1:2624984‑M2/1‑89 (MQ=255)

 ccGATTATTTATGGTGTATTAGATGCGACTCGATTTTTAGAACGTCATCAATATACCGAAAATACAGTTTCGCTGATGGAAGATCAGTTga                                                                                          <  2:1721406‑M2/91‑3 (MQ=255)

  cGATTATTTATGGTGTATTAGATGCGACTCGATTTTTAGAACGTCATCAATATACCGAAAATACAGTTTCGCTGATGGAAGATCAGTTgaa                                                                                         <  1:114738‑M2/91‑4 (MQ=255)

  cGATTATTTATGGTGTATTAGATGCGACTCGATTTTTAGAACGTCATCAATATACCGAAAATACAGTTTCGCTGATGGAAGATCAGTTgaa                                                                                         >  1:1721406‑M2/1‑88 (MQ=255)

   gATTATTTATGGTGTATTAGATGCGACTCGATTTTTAGAACGTCATCAATATACCGAAAATACAGTTTCGCTGATGGAAGATCAGTTgaaa                                                                                        >  2:1951648‑M2/1‑87 (MQ=255)

    attattTATGGTGTATTAGATGCGACTCGATTTTTAGAACGTCATCAATATACCGAAAATACAGTTTCGCTGATGGAAGATCAGTTgaaac                                                                                       >  1:2760580‑M2/1‑86 (MQ=255)

    attattTATGGTGTATTAGATGCGACTCGATTTTTAGAACGTCATCAATATACCGAAAATACAGTTTCGCTGATGGAAGATCAGTTgaaac                                                                                       <  1:2687747‑M2/91‑6 (MQ=255)

    attattTATGGTGTATTAGATGCGACTCGATTTTTAGAACGTCATCAATATACCGAAAATACAGTTTCGCTGATGGAAGATCAGTTgaaac                                                                                       <  2:1508432‑M2/91‑6 (MQ=255)

      tattgatGGTGTATTAGATGCGACTCGATTTTTAGAACGTCATCAATATACCGAAAATACAGTTTCGCTGATGGAAGATCAGTTgaaccta                                                                                     <  1:3057077‑M2/91‑8 (MQ=255)

       atttatGGTGTATTAGATGCGACTCGATTTTTAGAACGTCATCAATATACCGAAAATACAGTTTCGCTGATGGAAGATCAGTTGAAACTaa                                                                                    <  2:1865967/91‑1 (MQ=255)

       atttatGGTGTATTAGATGCGACTCGATTTTTAGAACGTCATCAATATACCGAAAATACAGTTTCGCTGATGGAAGATCAGTTGAAACTaa                                                                                    >  1:837474/1‑91 (MQ=255)

         ttatGGTGTATTAGATGCGACTCGATTTTTAGAACGTCATCAATATACCGAAAATACAGTTTCGCTGATGGAAGATCAGTTGAAACTAAGt                                                                                  <  1:1695262/91‑1 (MQ=255)

         ttatGGTGTATTAGATGCGACTCGATTTTTAGAACGTCATCAATATACCGAAAATACAGTTTCGCTGATGGAAGATCAGTTGAAACTAAGt                                                                                  >  2:2521237/1‑91 (MQ=255)

          tatGGTGTATTAGATGCGACTCGATTTTTAGAACGTCATCAATATACCGAAAATACAGTTTCGCTGATGGAAGATCAGTTGAAACTAAGTg                                                                                 >  1:2045814/1‑91 (MQ=255)

           atGGTGTATTAGATGCGACTCGATTTTTAGAACGTCATCAATATACCGAAAATACAGTTTCGCTGATGGAAGATCAGTTGAAACTAAGTGa                                                                                <  2:1250430/91‑1 (MQ=255)

           atGGTGTATTAGATGCGACTCGATTTTTAGAACGTCATCAATATACCGAAAATACAGTTTCGCTGATGGAAGATCAGTTGAAACTAAGTGa                                                                                <  2:1250717/91‑1 (MQ=255)

           atGGTGTATTAGATGCGACTCGATTTTTAGAACGTCATCAATATACCGAAAATACAGTTTCGCTGATGGAAGATCAGTTGAAACTAAGTGa                                                                                >  1:2175111/1‑91 (MQ=255)

             ggTGTATTAGATGCGACTCGATTTTTAGAACGTCATCAATATACCGAAAATACAGTTTCGCTGATGGAAGATCAGTTGAAACTAAGTGACa                                                                              >  2:3154538/1‑91 (MQ=255)

              gtgtATTAGATGCGACTCGATTTTTAGAACGTCATCAATATACCGAAAATACAGTTTCGCTGATGGAAGATCAGTTGAAACTAAGTGACAt                                                                             >  1:1590751/1‑91 (MQ=255)

              gtgtATTAGATGCGACTCGATTTTTAGAACGTCATCAATATACCGAAAATACAGTTTCGCTGATGGAAGATCAGTTGAAACTAAGTGACAt                                                                             <  2:3487821/91‑1 (MQ=255)

              gtgtATTAGATGCGACTCGATTTTTAGAACGTCATCAATATACCGAAAATACAGTTTCGCTGATGGAAGATCAGTTGAAACTAAGTGACAt                                                                             <  2:1831057/91‑1 (MQ=255)

               tgtATTAGATGCGACTCGATTTTTAGAACGTCATCAATATACCGAAAATACAGTTTCGCTGATGGAAGATCAGTTGAAACTAAGTGACATg                                                                            <  1:2586178/91‑1 (MQ=255)

                       aTGCGACTCGATTTTTAGAACGTCATCAATATACCGAAAATACAGTTTCGCTGATGGAAGATCAGTTGAAACTAAGTGACATGattattat                                                                    <  1:346896/91‑1 (MQ=255)

                       aTGCGACTCGATTTTTAGAACGTCATCAATATACCGAAAATACAGTTTCGCTGATGGAAGATCAGTTGAAACTAAGTGACATGattattat                                                                    <  1:3047948/91‑1 (MQ=255)

                       aTGCGACTCGATTTTTAGAACGTCATCAATATACCGAAAATACAGTTTCGCTGATGGAAGATCAGTTGAAACTAAGTGACATGattattat                                                                    <  1:1079413/91‑1 (MQ=255)

                        tGCGACTCGATTTTTAGAACGTCATCAATATACCGAAAATACAGTTTCGCTGATGGAAGATCAGTTGAAACTAAGTGACATGattattatt                                                                   <  1:2809772/91‑1 (MQ=255)

                        tGCGACTCGATTTTTAGAACGTCATCAATATACCGAAAATACAGTTTCGCTGATGGAAGATCAGTTGAAACTAAGTGACATGattattatt                                                                   <  1:785919/91‑1 (MQ=255)

                         tcGACTCGATTTTTAGAACGTCATCAATATACCGAAAATACAGTTTCGCTGATGGAAGATCAGTTGAAACTAAGTGACATGAttattatta                                                                  <  2:1457573/90‑1 (MQ=255)

                         gCGACTCGATTTTTAGAACGTCATCAATATACCGAAAATACAGTTTCGCTGATGGAAGATCAGTTGAAACTAAGTGACATGAttattatta                                                                  >  1:899991/1‑91 (MQ=255)

                         gCGACTCGATTTTTAGAACGTCATCAATATACCGAAAATACAGTTTCGCTGATGGAAGATCAGTTGAAACTAAGTGACATGAttattatta                                                                  >  1:1710456/1‑91 (MQ=255)

                          cGACTCGATTTTTAGAACGTCATCAATATACCGAAAATACAGTTTCGCTGATGGAAGATCAGTTGAAACTAAGTGACATGATTATTATtaa                                                                 >  1:1669081/1‑91 (MQ=255)

                           gACTCGATTTTTAGAACGTCATCAATATACCGAAAATACAGTTTCGCTGATGGAAGATCAGTTGAAACTAAGTGACATGATTATTATtaat                                                                <  1:218455/91‑1 (MQ=255)

                           gACTCGATTTTTAGAACGTCATCAATATACCGAAAATACAGCTTCGCTGATGGAAGATCAGTTGAAACTAAGTGACATGATTATTATtaat                                                                <  2:3407096/91‑1 (MQ=255)

                             cTCGATTTTTAGAACGTCATCAATATACCGAAAATACAGTTTCGCTGATGGAAGATCAGTTGAAACTAAGTGACATGATTATTATtaataa                                                              >  1:463315/1‑91 (MQ=255)

                             cTCGATTTTTAGAACGTCATCAATATACCGAAAATACAGTTTCGCTGATGGAAGATCAGTTGAAACTAAGTGACATGATTATTATtaataa                                                              >  1:3083536/1‑91 (MQ=255)

                             cTCGATTTTTAGAACGTCATCAATATACCGAAAATACAGTTTCGCTGATGGAAGATCAGTTGAAACTAAGTGACATGATTATTATtaataa                                                              <  1:377617/91‑1 (MQ=255)

                               cGATTTTTAGAACGTCATCAATATACCGAAAATACAGTTTCGCTGATGGAAGATCAGTTGAAACTAAGTGACATGATTATTATTAATaaaa                                                            >  2:2574340/1‑91 (MQ=255)

                                gATTTTTAGAACGTCATCAATATACCGAAAATACAGTTTCGCTGATGGAAGATCAGTTGAAACTAAGTGACATGATTATTATTAATAAAAt                                                           <  1:723354/91‑1 (MQ=255)

                                  tttttAGAACGTCATCAATATACCGAAAATACAGTTTCGCTGATGGAAGATCAGTTGAAACTAAGTGACATGATTATTATTAATAAAATTg                                                         >  2:3089164/1‑91 (MQ=255)

                                   ttttAGAACGTCATCAATATACCGAAAATACAGTTTCGCTGATGGAAGATCAGTTGAAACTAAGTGACATGATTATTATTAATAAAATTGa                                                        >  2:442528/1‑91 (MQ=255)

                                     ttAGAACGTCATCAATATACCGAAAATACAGTTTCGCTGATGGAAGATCAGTTGAAACTAAGTGACATGATTATTATTAATAAAATTGATc                                                      >  2:2750370/1‑91 (MQ=255)

                                      tAGAACGTCATCAATATACCGAAAATACAGTTTCGCTGATGGAAGATCAGTTGAAACTAAGTGACATGATTATTATTAATAAAATTGATCt                                                     >  2:487328/1‑91 (MQ=255)

                                      tAGAACGTCATCAATATACCGAAAATACAGTTTCGCTGATGGAAGATCAGTTGAAACTAAGTGACATGATTATTATTAATAAAATTGATCt                                                     <  2:3589744/91‑1 (MQ=255)

                                       ataaCGTCATCAATATACCGAAAATACAGTTTCGCTGATGGAAGATCAGTTGAAACTAAGTGACATGATTATTATTAATAAAATTGATCtt                                                    >  2:2261117/3‑91 (MQ=255)

                                       aGAACGTCATCAATATACCGAAAATACAGTTTCGCTGATGGAAGATCAGTTGAAACTAAGTGACATGATTATTATTAATAAAATTGATCtt                                                    >  1:957373/1‑91 (MQ=255)

                                         aaCGTCATCAATATACCGAAAATACAGTTTCGCTGATGGAAGATCAGTTGAAACTAAGTGACATGATTATTATTAATAAAATTGATCTtat                                                  <  1:331839/91‑1 (MQ=255)

                                         aaCGTCATCAATATACCGAAAATACAGTTTCGCTGATGGAAGATCAGTTGAAACTAAGTGACATGATTATTATTAATAAAATTGATCTtat                                                  >  2:383666/1‑91 (MQ=255)

                                          aCGTCATCAATATACCGAAAATACAGTTTCGCTGATGGAAGATCAGTTGAAACTAAGTGACATGATTATTATTAATAAAATTGATCTtata                                                 >  2:86508/1‑91 (MQ=255)

                                           cGTCATCAATATACCGAAAATACAGTTTCGCTGATGGAAGATCAGTTGAAACTAAGTGACATGATTATTATTAATAAAATTGATCTTATaa                                                <  1:1964691/91‑1 (MQ=255)

                                              catcaATATACCGAAAATACAGTTTCGCTGATGGAAGATCAGTTGAAACTAAGTGACATGATTATTATTAATAAAATTGATCTTATAACtg                                             >  1:2215270/1‑91 (MQ=255)

                                               atcaATATACCGAAAATACAGTTTCGCTGATGGAAGATCAGTTGAAACTAAGTGACATGATTATTATTAATAAAATTGATCTTATAACtga                                            <  1:1511766/91‑1 (MQ=255)

                                               atcaATATACCGAAAATACAGTTTCGCTGATGGAAGATCAGTTGAAACTAAGTGACATGATTATTATTAATAAAATTGATCTTATAACtga                                            <  2:569154/91‑1 (MQ=255)

                                                tcaATATACCGAAAATACAGTTTCGCTGATGGAAGATCAGTTGAAACTAAGTGACATGATTATTATTAATAAAATTGATCTTATAACtgat                                           <  2:2175111/91‑1 (MQ=255)

                                                tcaATATACCGAAAATACAGTTTCGCTGATGGAAGATCAGTTGAAACTAAGTGACATGATTATTATTAATAAAATTGATCTTATAACtgat                                           <  2:3181106/91‑1 (MQ=255)

                                                tcaATATACCGAAAATACAGTTTCGCTGATGGAAGATCAGTTGAAACTAAGTGACATGATTATTATTAATAAAATTGATCTTATAACtgat                                           <  2:914971/91‑1 (MQ=255)

                                                 caATATACCGAAAATACAGTTTCGCTGATGGAAGATCAGTTGAAACTAAGTGACATGATTATTATTAATAAAATTGATCTTATAACtgatg                                          >  2:2435910/1‑91 (MQ=255)

                                                 caATATACCGAAAATACAGTTTCGCTGATGGAAGATCAGTTGAAACTAAGTGACATGATTATTATTAATAAAATTGATCTTATAACtgatg                                          >  2:1781318/1‑91 (MQ=255)

                                                  aaTATACCGAAAATACAGTTTCGCTGATGGAAGATCAGTTGAAACTAAGTGACATGATTATTATTAATAAAATTGATCTTATAACtgatga                                         >  1:2458615/1‑91 (MQ=255)

                                                  aaTATACCGAAAATACAGTTTCGCTGATGGAAGATCAGTTGAAACTAAGTGACATGATTATTATTAATAAAATTGATCTTATAACtgatga                                         <  2:1667630/91‑1 (MQ=255)

                                                    tataCCGAAAATACAGTTTCGCTGATGGAAGATCAGTTGAAACTAAGTGACATGATTATTATtaata                                                               >  1:3546649/1‑67 (MQ=255)

                                                    tataCCGAAAATACAGTTTCGCTGATGGAAGATCAGTTGAAACTAAGTGACATGATTATTATtaata                                                               <  2:3546649/67‑1 (MQ=255)

                                                     ataCCGAAAATACAGTTTCGCTGATGGAAGATCAGTTGAAACTAAGTGACATGATTATTATTAATAAAATTGATCTTATAACTGATGACAg                                      >  1:2674941/1‑91 (MQ=255)

                                                        ccGAAAATACAGTTTCGCTGATGGAAGATCAGTTGAAACTAAGTGACATGATTATTATTAATAAAATTGATCTTATAACTGATGACAGTCt                                   <  1:1797999/91‑1 (MQ=255)

                                                        ccGAAAATACAGTTTCGCTGATGGAAGATCAGTTGAAACTAAGTGACATGATTATTATTAATAAAATTGATCTTATAACTGATGACAGTCt                                   >  2:2907781/1‑91 (MQ=255)

                                                         cGAAAATACAGTTTCGCTGATGGAAGATCAGTTGAAACTAAGTGACATGATTATTATTAATAAAATTGATCTTATAACTGATGACAGTCtt                                  <  1:3827875/91‑1 (MQ=255)

                                                          gAAAATACAGTTTCGCTGATGGAAGATCAGTTGAAACTAAGTGACATGATTATTATTAATAAAATTGATCTTATAACTGATGACAGACTTg                                 <  2:726887/91‑1 (MQ=255)

                                                          gAAAATACAGTTTCGCTGATGGAAGATCAGTTGAAACTAAGTGACATGATTATTATTAATAAAATTGATCTTATAACTGATGACAGACTTg                                 <  2:2222520/91‑1 (MQ=255)

                                                           aaaaTACAGTTTCGCTGATGGAAGATCAGTTGAAACTAAGTGACATGATTATTATTAATAAAATTGATCTTATAACTGATGACAGTCTTga                                <  1:3630220/91‑1 (MQ=255)

                                                            aaaTACAGTTTCGCTGATGGAAGATCAGTTGAAACTAAGTGACATGATTATTATTAATAAAATTGATCTTATAACTGATGACAGTCTTgag                               <  1:1463226/91‑1 (MQ=255)

                                                            aaaTACAGTTTCGCTGATGGAAGATCAGTTGAAACTAAGTGACATGATTATTATTAATAAAATTGATCTTATAACTGATGACAGTCTTgag                               <  2:3060687/91‑1 (MQ=255)

                                                            aaaTACAGTTTCGCTGATGGAAGATCAGTTGAAACTAAGTGACATGATTATTATTAATAAAATTGATCTTATAACTGATGACAGTCTTgag                               <  2:1021481/91‑1 (MQ=255)

                                                              aTACAGTTTCGCTGATGGAAGATCAGTTGAAAGTAAGTGACATGATTATTATTAATAAAATTGATCTTATAACTGTTGACAGTCTTGAGaa                             <  1:3310248/91‑1 (MQ=255)

                                                              aTACAGTTTCGCTGATGGAAGATCAGTTGAAACTAAGTGACATGATTATTATTAATAAAATTGATCTTATAACTGATGACAGTCTTGAGaa                             <  2:1422599/91‑1 (MQ=255)

                                                               tACAGTTTCGCTGATGGAAGATCAGTTGAAACTAAGTGACATGATTATTATTAATAAAATTGATCTTATAACTGATGACAGTCTTGAGaaa                            <  1:651967/91‑1 (MQ=255)

                                                                aCAGTTTCGCTGATGGAAGATCAGTTgaaactgtattttcggtatattgatgacgttctaaaaatcgagtcgcatctaatacaccataaat                           <  1:1189528‑M2/91‑66 (MQ=255)

                                                                aCAGTTTCGCTGATGGAAGATCAGTTGAAACTAAGTGACATGATTATTATTAATAAAATTGATCTTATAACTGATGACAGTCTTGAGaaaa                           >  1:3701191/1‑91 (MQ=255)

                                                                aCAGTTTCGCTGATGGAAGATCAGTTGAAACTAAGTGACATGATTATTATTAATAAAATTGATCTTATAACTGATGACAGTCTTGAGaaaa                           <  2:1169790/91‑1 (MQ=255)

                                                                aCAGTTTCGCTGATGGAAGATCAGTTGAAACTAAGTGACATGATTATTATTAATAAAATTGATCTTATAACTGATGACAGTCTTGAGaaaa                           >  1:1632160/1‑91 (MQ=255)

                                                                 cAGTTTCGCTGATGGAAGATCAGTTgaaactgtattttcggtatattgatgacgttctaaaaatcgagtcgcatctaatacaccataaata                          <  1:3246121‑M2/91‑67 (MQ=255)

                                                                   gTTTCGCTGATGGAAGATCAGTTgaaactgtattttcggtatattgatgacgttctaaaaatcgagtcgcatctaatacaccataaataat                        <  2:2224369‑M2/91‑69 (MQ=255)

                                                                    tttCGCTGATGGAAGATCAGTTGAAACTAAGTGACATGATTATTATTAATAAAATTGATCTTATAACTGATGACAGTCTTGAGAAAATTGa                       <  1:2380319/91‑1 (MQ=255)

                                                                    tttCGCTGATGGAAGATCAGTTGAAACTAAGTGACATGATTATTATTAATAAAATTGATCTTATAACTGATGACAGTCTTGAGAAAATTGa                       >  1:1989899/1‑91 (MQ=255)

                                                                    tttCGCTGATGGAAGATCAGTTGAAACTAAGTGACATGATTATTATTAATAAAATTGATCTTATAACTGATGACAGTCTTGAGAAAATTGa                       >  2:1122089/1‑91 (MQ=255)

                                                                      tCGCTGATGGAAGATCAGTTGAAACTAAGTGACATGATTATTATTAATAAAATTGATCTTATAACTGATGACAGTCTTGAGAAAATTGATa                     >  1:2311662/1‑91 (MQ=255)

                                                                        gCTGATGGAAGATCAGTTgaaactgtattttcggtatattgatgacgttctaaaaatcgagtcgcatctaatacaccataaataatcggct                   <  2:3884351‑M2/91‑74 (MQ=255)

                                                                        gCTGATGGAAGATCAGTTGAAACTAAGTGACATGATTATTATTAATAAAATTGATCTTATAACTGATGACAGTCTTAAGAAAATTGATAAg                   <  1:2085517/91‑1 (MQ=255)

                                                                         cTGATGGAAGATCAGTTGAAACTAAGTGACATGATTATTATTAATAAAATTGATCTTATAACTGATGACAGTCTTGAGAAAATTGATAAGc                  <  2:1203447/91‑1 (MQ=255)

                                                                         cTGATGGAAGATCAGTTGAAACTAAGTGACATGATTATTATTAATAAAATTGATCTTATAACTGATGACAGTCTTGAGAAAATTGATAAGc                  >  2:1999722/1‑91 (MQ=255)

                                                                           gATGGAAGATCAGTTGAAACTAAGTGACATGATTATTATTAATAAAATTGATCTTATAACTGATGACAGTCTTGAGAAAATTGATAAGCaa                >  1:2408463/1‑91 (MQ=255)

                                                                                 aGATCAGTTGAAACTAAGTGACATGATTATTATTAATAAAATTGATCTTATAACTGATGACAGTCTTGAGAAAATTGATAAGCAATTAGGt          <  2:1605126/91‑1 (MQ=255)

                                                                                   agcAGTTGAAACTAAGTGACATGATTATTATTAATAAAATTGATCTTATAACTGATGACAGTCTTGAGAAAATTGATAAGCAATTAGGTAt        <  2:2374105/89‑1 (MQ=255)

                                                                                     cAGTTGAAACTAAGTGACATGATTATTATTAATAAAATTGATCTTATAACTGATGACAGTCTTGAGAAAATTGATAAGCAATTAGGTATGa      <  1:556299/91‑1 (MQ=255)

                                                                                     cAGTTGAAACTAAGTGACATGATTATTATTAATAAAATTGATCTTATAACTGATGACAGTCTTGAGAAAATTGATAAGCAATTAGGTATGa      >  1:2978201/1‑91 (MQ=255)

                                                                                      aGTTGAAACTAAGTGACATGATTATTATTAATAAAATTGATCTTATAACTGATGACAGTCTTGAGAAAATTGATAAGCAATTAGGTATGAt     <  2:2653908/91‑1 (MQ=255)

                                                                                       gTTGAAACTAAGTGACATGATTATTATTAATAAAATTGATCTTATAACTGATGACAGTCTTGAGAAAATTGATAAGCAATTAGGTATGAtt    <  1:3005811/91‑1 (MQ=255)

                                                                                         tGAAACTAAGTGACATGATTATTATTAATAAAATTGATCTTATAACTGATGACAGTCTTGAGAAAATTGATAAGCAATTAGGTATGATTtg  >  2:3318600/1‑91 (MQ=255)

                                                                                         tGAAACTAAGTGACATGATTATTATTAATAAAATTGATCTTATAACTGATGACAGTCTTGAGAAAATTGATAAGCAATTAGGTATGATTtg  >  1:2839972/1‑91 (MQ=255)

                                                                                         tGAAACTAAGTGACATGATTATTATTAATAAAATTGATCTTATAACTGATGACAGTCTTGAGAAAATTGATAAGCAATTAGGTATGATTtg  >  1:2287777/1‑91 (MQ=255)

GCCGATTATTTATGGTGTATTAGATGCGACTCGATTTTTAGAACGTCATCAATATACCGAAAATACAGTTTCGCTGATGGAAGATCAGTTGAAACTAAGTGACATGATTATTATTAATAAAATTGATCTTATAACTGATGACAGTCTTGAGAAAATTGATAAGCAATTAGGTATGATTTG  >  USA300TCH1516_ALE/761191‑761370

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.