| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | 920377 = | 124 (0.650) | 14 (0.090) | 9/132 | NT | 11.7% | intergenic (+6/‑207) | USA300HOU_RS04555/USA300HOU_RS04565 | Putative monooxygenase/hypothetical protein |
| ? | USA300TCH1516_ALE | 920443 = | 109 (0.700) | intergenic (+72/‑141) | USA300HOU_RS04555/USA300HOU_RS04565 | Putative monooxygenase/hypothetical protein | |||||
Only 100 of 208 total aligned reads displayed.
AATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCAAACTAAAGTTCGC > USA300TCH1516_ALE/920353‑920533 | aatcaTGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGt < 2:1331371/91‑1 (MQ=255)aatcaTGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGt < 1:2883105/91‑1 (MQ=255) atcaTGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGtt > 2:799502/1‑91 (MQ=255) caTGTAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTc < 1:3233639/91‑1 (MQ=255) caTGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTc < 2:1641994/91‑1 (MQ=255) aTGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCt < 1:2091777/91‑1 (MQ=255) gCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTAt > 1:3136419/1‑91 (MQ=255) gCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTAt > 2:2406107/1‑91 (MQ=255) cAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGAATGCGTTTCTAtt < 1:2992989/91‑1 (MQ=255) aaTATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTATAttt > 2:3143855/1‑91 (MQ=255) atatAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTAtttt > 1:1334839/1‑91 (MQ=255) tataAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTAttttt > 1:88345/1‑90 (MQ=255) tataAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTa > 2:2689536/1‑91 (MQ=255) ggtaaaatagaaaCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTAc > 1:2632107‑M1/14‑91 (MQ=255) taaataaTCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTAcc < 2:1235171/91‑1 (MQ=255) aataatCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCaa < 2:2806545/91‑1 (MQ=255) aataatCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATGTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCaa > 1:3867426/1‑91 (MQ=255) ataatCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAAt < 2:2718928/91‑1 (MQ=255) taatCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAAtt < 1:1826255/91‑1 (MQ=255) aatCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAAttt > 1:2911992/1‑91 (MQ=255) aatCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAAttt > 1:3207659/1‑91 (MQ=255) aatCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAAttt < 1:63317/91‑1 (MQ=255) aatCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAAttt < 1:63277/91‑1 (MQ=255) atCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATCATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTa > 2:1910065/1‑91 (MQ=255) cGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAAt > 2:2154245/1‑91 (MQ=255) aCCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCa > 2:859163/1‑91 (MQ=255) ccGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAACTTAATCaa > 2:832951/1‑91 (MQ=255) AATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGa < 1:1573099‑M1/91‑1 (MQ=255) ATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGaa < 1:1062474‑M1/91‑1 (MQ=255) ATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGaa > 1:3579324‑M1/1‑91 (MQ=255) TCCACAAAAGCACAAGCACCCCCAAACATTATTTCAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGaaa < 2:1835056‑M1/91‑1 (MQ=255) ccacaaaaatggcaagcactaaaataatgtttgggggtgcttgtgcttttgtggattgcgTTTCTATTTTACCAATTTAATCAAACGaaaa > 2:1564194‑M2/61‑91 (MQ=255) CCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGaaaa < 2:427734‑M1/91‑1 (MQ=255) CACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAAc < 2:1063126‑M1/91‑1 (MQ=255) caaaaatggcaagcactaaaataatgtttgggggtgcttgtgcttttgtggattgcgTTTCTATTTTACCAATTTAATCAAACGAAAACAt > 2:2790746‑M2/58‑91 (MQ=255) CAAAAGCACAAGCACCCCCAAACATTATTTTATTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTTATCAAACGAAAACAt > 1:3305090‑M1/1‑91 (MQ=255) aaaatggcaagcactaaaataatgtttgggggtgcttgtgcttttgtggattgcgTTTCTATTTTACCAATTTAATCAAACGAAAACATCa > 2:3569501‑M2/56‑91 (MQ=255) AAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCa < 1:3733843‑M1/91‑1 (MQ=255) aaatggcaagcactaaaataatgtttgggggtgcttgtgcttttgtggattgcgTTTCTATTTTACCAATTTAATCAAACGAAAACATCaa > 2:3646668‑M2/55‑91 (MQ=255) AAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCaa < 1:906652‑M1/91‑1 (MQ=255) gcacaagcacCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGc < 1:689925/91‑1 (MQ=255) gcacaagcacCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGc < 2:2565603/91‑1 (MQ=255) gcacaagcacCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGc > 1:949250/1‑91 (MQ=255) gcacaagcacCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGc < 1:2820060/91‑1 (MQ=255) atggcaagcactaaaataatgtttgggggtgcttgtgcttttgtggattgcgTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGc > 1:1740585‑M2/53‑91 (MQ=255) caagcacCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGa > 2:1501574/1‑91 (MQ=255) aagcacCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGaa < 1:1555473/91‑1 (MQ=255) gcacCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGa > 2:2939560/1‑91 (MQ=255) gcactaaaataatgtttgggggtgcttgtgcttttgtggattgcgTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGAt > 1:2062603‑M2/46‑91 (MQ=255) cccccAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCg > 1:3812768/1‑91 (MQ=255) cccccAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCg < 2:763822/91‑1 (MQ=255) cccccAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCg > 1:366084/1‑91 (MQ=255) ccccAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGc > 2:370959/1‑91 (MQ=255) ccAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCg > 1:1544744/1‑91 (MQ=255) cAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGa > 2:117610/1‑91 (MQ=255) aaaCATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGaa < 2:1067508/91‑1 (MQ=255) aaaCATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGaa < 2:1068413/91‑1 (MQ=255) aaCATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGaaa > 1:1107983/1‑91 (MQ=255) aaCATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGaaa < 1:3192223/91‑1 (MQ=255) aaCATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGCTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGaaa > 1:2036979/1‑91 (MQ=255) cATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGa < 1:71845/91‑1 (MQ=255) attattTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGAt > 2:558224/1‑91 (MQ=255) ttattTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTCCCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGACAGAtt > 2:1014306/1‑91 (MQ=255) ttattTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGAtt > 2:2326892/1‑91 (MQ=255) tattTTAGTGCTTGCCATTTTTGTGGTTTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGAttt > 2:3479708/1‑91 (MQ=255) attTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTGATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGAtttt > 2:3404129/1‑91 (MQ=255) attTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGAtttt > 1:1152049/1‑91 (MQ=255) attTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGAtttt > 2:1207009/1‑91 (MQ=255) ttttAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTa > 2:2441511/1‑91 (MQ=255) ttttAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTa > 2:3295701/1‑91 (MQ=255) tttAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTaa < 1:1980318/91‑1 (MQ=255) tAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATc < 1:2441511/91‑1 (MQ=255) aGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCa > 1:2228475/1‑91 (MQ=255) aGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCa < 2:1731174/91‑1 (MQ=255) gTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCaa > 2:3692398/1‑91 (MQ=255) tGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAg > 2:172892/1‑91 (MQ=255) gCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTATAAACAAGc < 2:305977/91‑1 (MQ=255) cTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCa < 1:343058/91‑1 (MQ=255) ttGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCaa < 1:810630/91‑1 (MQ=255) tGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCaaa < 2:2488772/91‑1 (MQ=255) gCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCaaaa < 2:633752/91‑1 (MQ=255) ccATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCaaaaa < 2:3238953/91‑1 (MQ=255) ccATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCaaaaa < 2:3239437/91‑1 (MQ=255) aTTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACa < 1:540361/91‑1 (MQ=255) ttttgtggatttcgTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATc > 2:1534304‑M2/15‑91 (MQ=255) tttgtggattgcgTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCa > 1:1508309‑M2/14‑91 (MQ=255) tttgtggattgcgTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCa > 1:2717885‑M2/14‑91 (MQ=255) tttgtggattgcgTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCa > 1:1634398‑M2/14‑91 (MQ=255) tttgtggattgcgTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCa > 2:70330‑M2/14‑91 (MQ=255) tgtggattgcgTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCaaa > 1:14178‑M2/12‑91 (MQ=255) tggattgcgTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCAAACt > 1:2969553‑M2/10‑91 (MQ=255) ggattgcgTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCAAACTa > 1:3742376‑M2/9‑91 (MQ=255) gattgcgTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCAAACTaa < 1:1130839‑M2/84‑1 (MQ=255) attgcgTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCAAACTaaa < 2:2632107‑M2/85‑1 (MQ=255) tgcgTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCAAACTAAAGt < 1:2276081‑M2/87‑1 (MQ=255) tgcgTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATCTTAATCAAGCAAAAACATCAAACTAAAGt > 1:3113554‑M2/5‑91 (MQ=255) gcgTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCAAACTAAAGtt < 1:1221337‑M2/88‑1 (MQ=255) cgTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCAAACTAAAGTTc < 2:1248969‑M2/89‑1 (MQ=255) gTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCAAACTAAAGTTCg < 1:2584614‑M2/90‑1 (MQ=255) tttCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCAAACTAAAGTTCGc < 2:1432756/91‑1 (MQ=255) | AATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCAAACTAAAGTTCGC > USA300TCH1516_ALE/920353‑920533 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |