| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | = 920390 | 123 (0.650) | 12 (0.080) | 6/132 | NT | 10.2% | intergenic (+19/‑194) | USA300HOU_RS04555/USA300HOU_RS04565 | Putative monooxygenase/hypothetical protein |
| ? | USA300TCH1516_ALE | = 920428 | 109 (0.700) | intergenic (+57/‑156) | USA300HOU_RS04555/USA300HOU_RS04565 | Putative monooxygenase/hypothetical protein | |||||
Only 100 of 215 total aligned reads displayed.
CAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACAT > USA300TCH1516_ALE/920338‑920518 | caatcaaATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCAt > 2:1917877/1‑91 (MQ=255)caatcaaATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCAt < 2:1770883/91‑1 (MQ=255) aaTCAAATTAATCAAATCATGCAATATAAATCATCGACCGCAATCCACAAAAGCACACGCACCCCCAAACATTATTTTAGTGCTTGCCATt < 1:3448703‑M2/91‑2 (MQ=255) ttgatgttttcgtttgattaaattggtaaaatagaaaCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCAttt > 2:3646668‑M1/38‑91 (MQ=255) ttgatgttttcgtttgattaaattggtaaaatagaaaCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCAttt > 1:3147540‑M1/38‑91 (MQ=255) aTCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATtt < 1:185887‑M2/91‑3 (MQ=255) tgatgttttcgtttgattaaattggtaaaatagaaaCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCAtttt > 2:3569501‑M1/37‑91 (MQ=255) tCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATttt > 1:1665645‑M2/1‑88 (MQ=255) gatgttttcgtttgattaaattggtaaaatagaaaCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCAttttt > 2:2584614‑M1/36‑91 (MQ=255) cAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATtttt > 1:1982795‑M2/1‑87 (MQ=255) atgttttcgtttgattaaattggtaaaatagaaaCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTtg > 2:2790746‑M1/35‑91 (MQ=255) aaTTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATttttgt < 1:3289589‑M2/91‑7 (MQ=255) ttttcgtttgattaaattggtaaaatagaaaCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTgg > 1:3071318‑M1/32‑91 (MQ=255) aatcaaatcaTGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATttttgtggat < 1:755332‑M2/91‑11 (MQ=255) aatcaaatcaTGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATttttgtggat < 1:2955944‑M2/91‑11 (MQ=255) aatcaaatcaTGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATttttgtgg > 2:2159829‑M2/1‑81 (MQ=255) atcaaatcaTGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATttttgtggatt > 2:65449‑M2/1‑80 (MQ=255) caaatcaTGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATttttgtggattgc > 2:3656728‑M2/1‑78 (MQ=255) aaatcaTGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATttttgtggattgcg < 2:2798146‑M2/91‑15 (MQ=255) aaatcaTGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTCTAGTGCTTGCCATttttgtggattgcg < 2:1341541‑M2/91‑15 (MQ=255) aatcaTGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGt > 2:605775/1‑91 (MQ=255) atcaTGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGtt > 2:799438/1‑91 (MQ=255) aTGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCt < 1:2091777/91‑1 (MQ=255) gCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTAt > 1:967245/1‑91 (MQ=255) gCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTAt > 2:2406107/1‑91 (MQ=255) cAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGAATGCGTTTCTAtt < 1:2992989/91‑1 (MQ=255) aaTATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTGTAttt > 2:3147459/1‑91 (MQ=255) aaTATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTAttt > 2:243353/1‑91 (MQ=255) aaTATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTAttt < 1:3220391/91‑1 (MQ=255) atatAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATCTTTGTGGATTGCGTTTCTAtttt > 2:1531455/1‑91 (MQ=255) atatAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATCATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTAtttt > 2:3428354/1‑91 (MQ=255) tataAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTAttttt > 1:88345/1‑90 (MQ=255) tataAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTa > 2:2689536/1‑91 (MQ=255) tataAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTa > 2:1566601/1‑91 (MQ=255) ggtaaaatagaaaCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTAc > 1:2632107‑M1/14‑91 (MQ=255) ataaataaTCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTAc < 1:606824/91‑1 (MQ=255) taaataaTCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTAcc < 2:1235171/91‑1 (MQ=255) aataatCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCaa < 2:2806545/91‑1 (MQ=255) aataatCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATGTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCaa > 1:3867426/1‑91 (MQ=255) ataatCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAAt < 1:3801990/91‑1 (MQ=255) ataatCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAAt < 1:1585848/91‑1 (MQ=255) ataatCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAAt < 2:2718928/91‑1 (MQ=255) aatCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAAttt < 1:63302/91‑1 (MQ=255) aatCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAAttt > 1:3207659/1‑91 (MQ=255) aatCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAAttt > 1:2911992/1‑91 (MQ=255) atCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTa > 1:925114/1‑91 (MQ=255) atCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTa > 1:2520605/1‑91 (MQ=255) tCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTaa > 2:810630/1‑91 (MQ=255) tCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTaa > 2:3491232/1‑91 (MQ=255) gACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATc < 2:3294449/91‑1 (MQ=255) gACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATc < 2:3296154/91‑1 (MQ=255) aCCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCa > 2:859163/1‑91 (MQ=255) ccGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCaa > 1:3629724/1‑91 (MQ=255) GCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAAc < 2:2483009‑M1/91‑1 (MQ=255) ATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGaa < 1:1062474‑M1/91‑1 (MQ=255) TCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGaaa > 1:3132533‑M1/1‑91 (MQ=255) TCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGaaa > 2:557501‑M1/1‑91 (MQ=255) TCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGaaa < 2:1834001‑M1/91‑1 (MQ=255) cacaAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATttttgtggattgcggtcgattatttatattgcatgatttgattaat < 1:1180885‑M2/91‑47 (MQ=255) CACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAAc < 2:1063126‑M1/91‑1 (MQ=255) acaAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATttttgtggattgcggtcgattatttatattgcatgatttgattaatt < 2:467459‑M2/91‑48 (MQ=255) acaAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATttttgtggattgcggtcgattatttatattgcatgatttgattaatt < 2:1542463‑M2/91‑48 (MQ=255) aaaaGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATttttgtggattgcggtcgattatttatattgcatgatttgattaatttg < 1:2064685‑M2/91‑50 (MQ=255) AAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATc > 1:1477555‑M1/1‑91 (MQ=255) aaaGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATttttgtggattgcggtcgattatttatattgcatgatttgattaatttga < 2:1533913‑M2/91‑51 (MQ=255) AAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCaa < 2:848589‑M1/91‑1 (MQ=255) gcacaagcacCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGc < 1:2824344/91‑1 (MQ=255) gcacaagcacCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGc < 1:689925/91‑1 (MQ=255) caagcacCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGa > 1:1313736/1‑91 (MQ=255) caagcacCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGa > 2:1555473/1‑91 (MQ=255) aagcacCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGTTTTTTGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGaa > 2:2492628/1‑91 (MQ=255) gcacCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGa > 2:2939600/1‑91 (MQ=255) cccccAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCg > 2:1651434/1‑91 (MQ=255) cccccAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCg > 1:366153/1‑91 (MQ=255) ccccAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGc > 1:1559358/1‑91 (MQ=255) ccccAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGc > 2:370959/1‑91 (MQ=255) ccAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCg > 1:1544744/1‑91 (MQ=255) cAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGa > 2:117610/1‑91 (MQ=255) aaaCATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGaa < 2:1067508/91‑1 (MQ=255) aaaCATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGaa > 2:3096154/1‑91 (MQ=255) aaaCATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGaa < 2:1068413/91‑1 (MQ=255) aaCATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGaaa > 1:1107983/1‑91 (MQ=255) aaCATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGCTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGaaa > 1:2036979/1‑91 (MQ=255) aCATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAg < 2:1454944/91‑1 (MQ=255) attattTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGAt < 1:93523/91‑1 (MQ=255) ttattTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGAtt > 2:2326892/1‑91 (MQ=255) tattTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGAttt < 2:1256285/91‑1 (MQ=255) attTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGAtttt > 1:1152049/1‑91 (MQ=255) attTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGAtttt > 2:1207009/1‑91 (MQ=255) tAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATc < 1:2441511/91‑1 (MQ=255) aGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCa > 1:2228475/1‑91 (MQ=255) gTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCaa > 1:1800254/1‑91 (MQ=255) tGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCacg > 2:173043/1‑89 (MQ=255) cTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCa < 1:343058/91‑1 (MQ=255) ttGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCaa < 1:810630/91‑1 (MQ=255) ccATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCaaaaa < 2:3239319/91‑1 (MQ=255) ccATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCaaaaa > 2:1900754/1‑91 (MQ=255) aTTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACa < 1:540361/91‑1 (MQ=255) tttttGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACAt < 1:64324/91‑1 (MQ=255) tttttGTGGATTGCGTTTCTATTTTACCAATTTAAGCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACAt > 2:703489/1‑91 (MQ=255) | CAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACAT > USA300TCH1516_ALE/920338‑920518 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |