| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | = 1255979 | 129 (0.680) | 26 (0.160) | 14/134 | NT | 19.9% | intergenic (+195/+49) | rplS/USA300HOU_RS06250 | 50S ribosomal protein L19/hypothetical protein |
| ? | USA300TCH1516_ALE | = 1255992 | 102 (0.640) | intergenic (+208/+36) | rplS/USA300HOU_RS06250 | 50S ribosomal protein L19/hypothetical protein | |||||
Only 100 of 250 total aligned reads displayed.
GATAATGTAATTGTTTATTCCTTCTCTATTCATAACGTGTTTGCTCAAAATGGTTATATAAACAAAAATCTACTAAGTGCCATTGAAAAGG‑ACTTAGTAGATTTATTAAATATATGCGTAGCAACATTATTTTTGTCTTGCCCATCTCGTGAAAATAATACTACATATAATGCCAAATATA > USA300TCH1516_ALE/1255902‑1256082 | tatatgtagtattattttcacgagatgggcaagacaaaaataatgttgctacgcatatatttaatAAATCTACTAAGTGCCATTGAAAAgg > 1:106734‑M1/66‑91 (MQ=255)gATAATGTAATTGTTTATTCCTTCTCTATTCATAACGTGTTTGCTCAAAATGGTTATATAAACAAAAATCTACTAAGTGCCATTGAAAAgg > 1:3482646/1‑91 (MQ=255)gATAATGTAATTGTTTATTCCTTCTCTATTCATAACGTGTTTGCTCAAAATGGTTATATAAACAAAAATCTACTAAGTGCCATTGAAAAgg > 1:2346355/1‑91 (MQ=255)gATAATGTAATTGTTTATTCCTTCTCTATTCATAACGTGTTTGCTCAAAATGGTTATATAAACAAAAATCTACTAAGTGCCATTGAAAAgg > 1:1416335/1‑91 (MQ=255) aTAATGTAATTGTTTATTCCTTCTCTATTCATAACGTGTTTGCTCAAAATGGTTATATAAACAAAAATCTACTAAGTGCCATTGAAAAGGa < 1:698567‑M2/91‑2 (MQ=255) aTAATGTAATTGTTTATTCCTTCTCTATTCATAACGTGTTTGCTCAAAATGGTTATATAAACAAAAATCTACTAAGTGCCATTGAAAAGGa > 2:3025114‑M2/1‑90 (MQ=255) tAATGTAATTGTTTATTCCTTCTCTATTCATAACGTGTTTGCTCAAAATGGTTATATAAACAAAAATCTACTAAGTGCCATTGAAAAGGac < 1:2186321‑M2/91‑3 (MQ=255) tAATGTAATTGTTTATTCCTTCTCTATTCATAACGTGTTTGCTCAAAATGGTTATATAAACAAAAATCTACTAAGTGCCATTGAAAAGGac < 1:1057404‑M2/91‑3 (MQ=255) tAATGTAATTGTTTATTCCTTCTCTATTCATAACGTGTTTGCTCAAAATGGTTATATAAACAAAAATCTACTAAGTGCCATTGAAAAGGac > 2:2233506‑M2/1‑89 (MQ=255) atgtagtattattttcacgagatgggcaagacaaaaataatgttgctacgcatatatttaatAAATCTACTAAGTGCCATTGAAAAGG‑ACt > 2:1409979‑M1/63‑91 (MQ=255) atgtagtattattttcacgagatgggcaagacaaaaataatgttgctacgcatatatttaatAAATCTACTAAGTGCCATTGAAAAGG‑ACt > 1:707773‑M1/63‑91 (MQ=255) atgtagtattattttcacgagatgggcaagacaaaaataatgttgctacgcatatatttaatAAATCTACTAAGTGCCATTGAAAAGG‑ACt > 2:1604090‑M1/63‑91 (MQ=255) aTGTAATTGTTTATTCCTTCTCTATTCATAACGTGTTTGCTCAAAATGGTTATATAAACAAAAATCTACTAAGTGCCATTGAAAAGGactt < 2:1853788‑M2/91‑5 (MQ=255) aTGTAATTGTTTATTCCTTCTCTATTCATAACGTGTTTGCTCAAAATGGTTATATAAACAAAAATCTACTAAGTGCCATTGAAAAGGactt > 2:2528557‑M2/1‑87 (MQ=255) aTGTAATTGTTTATTCCTTCTCTATTCATAACGTGTTTGCTCAAAATGGTTATATAAACAAAAATCTACTAAGTGCCATTGAAAAGGactt > 1:2054420‑M2/1‑87 (MQ=255) tagtattattttcacgagatgggcaagacaaaaataatgttgctacgcatatatttaatAAATCTACTAAGTGCCATTGAAAAGG‑ACTtag > 2:3762200‑M1/60‑91 (MQ=255) gTAATTGTTTATTCCTTCTCTATTCATAACGTGTTTGCTCAAAATGGTTATATAAACAAAAATCTACTAAGTGCCATTGAAAAGGacttag > 1:882190‑M2/1‑85 (MQ=255) gTAATTGTTTATTCCTTCTCTATTCATAACGTGTTTGCTCAAAATGGTTATATAAACAAAAATCTACTAAGTGCCATTGAAAAGGacttag < 2:1470344‑M2/91‑7 (MQ=255) ttGTTTATTCCTTCTCTATTCATAACGTGTTTGCTCAAAATGGTTATATAAACAAAAATCTACTAAGTGCCATTGAAAAGGacttagtaga > 2:1885261‑M2/1‑81 (MQ=255) gTTTATTCCTTCTCTATTCATAACGTGTTTGCTCAAAATGGTTATATAAACAAAAATCTACTAAGTGCCATTGAAAAGGacttagtagatt > 2:3289521‑M2/1‑79 (MQ=255) ttATTCCTTCTCTATTCATAACGTGTTTGCTCAAAATGGTTATATAAACAAAAATCTACTAAGTGCCATTGAAAAGG‑ACTTAGTAGATtta > 1:3251318/1‑91 (MQ=255) ttATTCCTTCTCTATTCATAACGTGTTTGCTCAAAATGGTTATATAAACAAAAATCTACTAAGTGCCATTGAAAAGG‑ACTTAGTAGATtta > 1:2251296/1‑91 (MQ=255) tATTCCTTCTCTATTCATAACGTGTTTGCTCAAAATGGTTATATAAACAAAAATCTACTAAGTGCCATTGAAAAGG‑ACTTAGTAGATttat < 1:686781/91‑1 (MQ=255) tATTCCTGCTCTATTCATAACGTGTTTGCTCAAAATGGTTATATAAACAAAAATCTACTAAGTGCCATTGAAAAGG‑ACTTAGTAGATttat < 2:3464000/91‑1 (MQ=255) aTTCCTTCTCTATTCATAACGTGTTTGCTCAAAATGGTTATATAAACAAAAATCTACTAAGTGCCATTGAAAAGG‑ACTTAGTAGATttatt < 2:552662/91‑1 (MQ=255) cTTCTCTATTCATAACGTGTTTGCTCAAAATGGTTATATAAACAAAAATCTACTAAGTGCCATTGAAAAGG‑ACTTAGTAGATTTATTAAat < 2:3478488/91‑1 (MQ=255) tctcTATTCATAACGTGTTTGCTCAAAATGGTTATATAAACAAAAATCTACTAAGTGCCATTGAAAAGG‑ACTTAGTAGATTTATTAAatat > 1:922993/1‑91 (MQ=255) ctctATTCATAACGTGTTTGCTCAAAATGGTTATATAAACAAAAATCTACTAAGTGCCATTGAAAAGG‑ACTTAGTAGATTTATTAAatata > 1:135642/1‑91 (MQ=255) tctATTCATAACGTGTTTGCTCAAAATGGTTATATAAACAAAAATCTACTAAGTGCCATTGAAAAGG‑ACTTAGTAGATTTATTAAatatat < 1:800721/91‑1 (MQ=255) tctATTCATAACGTGTTTGCTCAAAATGGTTATATAAACAAAAATCTACTAAGTGCCATTGAAAAGG‑ACTTAGTAGATTTATTAAatatat < 1:3549433/91‑1 (MQ=255) ctATTCATAACGTGTTTGCTCAAAATGGTTATATAAACAAAAATCTACTAAGTGCCATTGAAAAGG‑ACTTAGTAGATTTATTAAATATATg > 2:1212694/1‑91 (MQ=255) tCATAACGTGTTTGCACAAAATGGTTATATAAACAAAAATCTACTAAGTGCCATTGAAAAGG‑ACTTAGTAGATTTATTAAATATATGCGTa > 1:3311136/1‑91 (MQ=255) cATAACGTGTTTGCTCAAAATGGTTATATAAACAAAAATCTACTAAGTGCCATTGAAAAGG‑ACTTAGTAGATTTATTAAATATATGCGTAg > 2:1680377/1‑91 (MQ=255) cATAACGTGTTTGCTCAAAATGGTTATATAAACAAAAATCTACTAAGTGCCATTGAAAAGG‑ACTTAGTAGATTTATTAAATATATGCGTAg < 1:1216523/91‑1 (MQ=255) tAACGTGTTTGCTCAAAATGGTTATATAAACAAAAATCTACTAAGTGCCATTGAAAAGG‑ACTTAGTAGATTTATTAAATATATGCGTAGCa < 1:1015055/91‑1 (MQ=255) tAACGTGTTTGCTCAAAATGGTTATATAAACAAAAATCTACTAAGTGCCATTGAAAAGG‑ACTTAGTAGATTTATTAAATATATGCGTAGCa > 2:1939122/1‑91 (MQ=255) aCGTGTTTGCTCAAAATGGTTATATAAACAAAAATCTACTAAGTGCCATTGAAAAGG‑ACTTAGTAGATTTATTAAATATATGCGTAGCAAc < 2:1041332/91‑1 (MQ=255) aCGTGTTTGCTCAAAATGGTTATATAAACAAAAATCTACTAAGTGCCATTGAAAAGG‑ACTTAGTAGATTTATTAAATATATGCGTAGCAAc > 1:2706753/1‑91 (MQ=255) aCGTGTTTGCTCAAAATGGTTATATAAACAAAAATCTACTAAGTGCCATTGAAAAGG‑ACTTAGTAGATTTATTAAATATATGCGTAGCAAc < 1:2121693/91‑1 (MQ=255) aCGTGTTTGCTCAAAATGGTTATATAAACAAAAATCTACTAAGTGCCATTGAAAAGG‑ACTTAGTAGATTTATTAAATATATGCGTAGCAAc > 1:2092387/1‑91 (MQ=255) cGTGTTTGCTCAAAATGGTTATATAAACAAAAATCTACTAAGTGCCATTGAAAAGG‑ACTTAGTAGATTTATTAAATATATGCGTAGCAACa > 1:1344767/1‑91 (MQ=255) gtgtTTGCTCAAAATGGTTATATAAACAAAAATCTACTAAGTGCCATTGAAAAGG‑ACTTAGTAGATTTATTAAATATATGCGTAGCAACat > 2:193744/1‑91 (MQ=255) gtgtTTGCTCAAAATGGTTATATAAACAAAAATCTACTAAGTGCCATTGAAAAGG‑ACTTAGTAGATTTATTAAATATATGCGTAGCAACat < 2:663694/91‑1 (MQ=255) tgtTTGCTCAAAATGGTTATATAAACAAAAATCTACTAAGTGCTATTGAAAAGG‑ACTTAGTAGATTTATTAAATATATGCGTAGCAACatt < 1:3869773/91‑1 (MQ=255) tgtTTGCTCAAAATGGTTATATAAACAAAAATCTACTAAGTGCCATTGAAAAGG‑ACTTAGTAGATTTATTAAATATATGCGTAGCAACatt > 1:496408/1‑91 (MQ=255) ttGCTCAAAATGGTTATATAAACAAAAATCTACTAAGTGCCATTGAAAAGGacttagtagacttttgtttatataaccattttgagcaaac < 1:2746873‑M2/91‑41 (MQ=255) ttGCTCAAAATGGTTATATAAACAAAAATCTACTAAGTGCCATTGAAAAGG‑ACTTAGTAGATTTATTAAATATATGCGTAGCAACattatt < 1:1941625/91‑1 (MQ=255) ttGCTCAAAATGGTTATATAAACAAAAATCTACTAAGTGCCATTGAAAAGG‑ACTTAGTAGATTTATTAAATATATGCGTAGCAACattatt > 2:3112861/1‑91 (MQ=255) ttGCCCAAAATGGTTATACAAACAAAAATCTACTACGTGCCATTGAAAAGG‑ACTTAGTAGCTTTATTACATATATGCGTAGCAACattatc > 2:881418/1‑90 (MQ=255) tGCTCAAAATGGTTATATAAACAAAAATCTACTAAGTGCCATTGAAAAGG‑ACTTAGTAGATTTATTAAATATATGCGTAGCAACATTAttt < 1:2397954/91‑1 (MQ=255) cAAAATGGTTATATAAACAAAAATCTACTAAGTGCCATTGAAAAGG‑ACTTAGTAGATTTATTAAATATATGCGTAGCAACATTATTTTTGt > 2:2862340/1‑91 (MQ=255) cAAAATGGTTATATAAACAAAAATCTACTAAGTGCCATTGAAAAGG‑ACTTAGTAGATTTATTAAATATATGCGTAGCAACATTATTTTTGt > 2:1571795/1‑91 (MQ=255) aaaaTGGTTATATAAACAAAAATCTACTAAGTGCCATTGAAAAGG‑ACTTAGTAGATTTATTAAATATATGCGTAGCAACATTATTTTTGTc > 1:3215789/1‑91 (MQ=255) aaaTGGTTATATAAACAAAAATCTACTAAGTGCCATTGAAAAGG‑ACTTAGTAGATTTATTAAATATATGCGTAGCAACATTATTTTTGTCt < 1:3101742/91‑1 (MQ=255) aTGGTTATATAAACAAAAATCTACTAAGTGCCATTGAAAAGG‑ACTTAGTAGATTTATTAAATATATGCGTAGCAACATTATTTTTGTCTTg > 1:1230454/1‑91 (MQ=255) aTGGTTATATAAACAAAAATCTACTAAGTGCCATTGAAAAGG‑ACTTAGTAGATTTATTAAATATATGCGTAGCAACATTATTTTTGTCTTg < 1:813344/91‑1 (MQ=255) tGGTTATATAAACAAAAATCTACTAAGTGCCATTGAAAAGG‑ACTTAGTAGATTTATTAAATATATGCGTAGCAACATTATTTTTGTCTTGc < 2:2170229/91‑1 (MQ=255) gTTATATAAACAAAAATCTACTAAGTGCCATTGAAAAGG‑ACTTAGTAGATTTATTAAATATATGCGTAGCAACATTATTTTTGTCTTGccc > 1:565760/1‑91 (MQ=255) gTTATATAAACAAAAATCTACTAAGTGCCATTGAAAAGG‑ACTTAGTAGATTTATTAAATATATGCGTAGCAACATTATTTTTGTCTTGccc < 1:1164121/91‑1 (MQ=255) gTTATATAAACAAAAATCTACTAAGTGCCATTGAAAAGG‑ACTTAGTAGATTTATTAAATATATGCGTAGCAACATTATTTTTGTCTTGccc < 2:1710042/91‑1 (MQ=255) ttATATAAACAAAAATCTACTAAGTGCCATTGAAAAGG‑ACTTAGTAGATTTATTAAATATATGCGTAGCAACATTATTTTTGTCTTGCCCa > 2:785343/1‑91 (MQ=255) tatataAACAAAAATCTACTAAGTGCCATTGAAAAGG‑ACTTAGTAGATTTATTAAATATATGCGTAGCAACATTATTTTTGTCTTGCCCAt > 2:2905393/1‑91 (MQ=255) atataAACAAAAATCTACTAAGTGCCATTGAAAAGG‑ACTTAGTAGATTTATTAAATATATGCGTAGCAACATTATTTTTGTCTTGCCCAtc > 2:744728/1‑91 (MQ=255) taAACAAAAATCTACTAAGTGCCATTGAAAAGG‑ACTTAGTAGATTTATTAAATATATGCGTAGCAACATTATTTTTGTCTTGCCCATCTCg < 2:2701709/91‑1 (MQ=255) tttaatAAATCTACTAAGTCCTTTTCAATGGC‑ACTTAGTAGATTTATTAAATATATGCGTAGCAACATTATTTTTGTCTTGCCCATCTCGt < 1:2731185‑M1/85‑1 (MQ=255) ttaatAAATCTACTAAGTCCTTTTCAATGGC‑ACTTAGTAGATTTATTAAATATATGCGTAGCAACATTATTTTTGTCTTGCCCATCTCGTg < 1:3673485‑M1/86‑1 (MQ=255) taatAAATCTACTAAGT‑CCTTTTCAATGGCACTTAGTAGATTTATTAAATATATGCGTAGCAACATTATTTTTGTCTTGCCCATCTCGTGa < 2:2012233‑M1/87‑1 (MQ=255) aaaaaTCTACTAAGTGCCATTGAAAAGG‑ACTTAGTAGATTTATTAAATATATGCGTAGCAACATTATTTTTGTCTTGCCCATCTCGTGaaa < 1:2943087/91‑1 (MQ=255) aaaaaTCTACTAAGTGCCATTGAAAAGG‑ACTTAGTAGATTTATTAAATATATGCGTAGCAACATTATTTTTGTCTTGCCCATCTCGTGaaa < 1:3857260/91‑1 (MQ=255) aaaaTCTACTAAGTGCCATTGAAAAGGacttagtagatttttgtttatataaccattttgagcaaacacgttatgaatagagaaggaataa < 2:2499927‑M2/91‑65 (MQ=255) aaaaTCTACTAAGTGCCATTGAAAAGG‑ACTTAGTAGATTTATTAAATATATGCGTAGCAACATTATTTTTGTCTTGCCCATCTCGTGaaaa < 2:1057404/91‑1 (MQ=255) AAATCTACTAAGTGCCATTGAAAAGG‑ACTTAGTAGATTTATTAAATATATGCGTAGCAACATTATTTTTGTCTTGCCCATCTCGTGAAaat < 2:3272837‑M1/91‑1 (MQ=255) AATCTACTAAGTGCCATTGAAAAGG‑ACTTAGTAGATTTATTAAATATATGCGTAGCAACATTATTTTTGTCTTGCCCATCTCGTGAAaata < 1:2405109‑M1/91‑1 (MQ=255) AATCTACTAAGTGCCATTGAAAAGG‑ACTTAGTAGATTTATTAAATATATGCGTAGCAACATTATTTTTGTCTTGCCCATCTCGTGAAaata > 1:1269216‑M1/1‑91 (MQ=255) tCTACTAAGTGCCATTGAAAAGGacttagtagatttttgtttatataaccattttgagcaaacacgttatgaatagagaaggaataaacaa < 1:54340‑M2/91‑69 (MQ=255) TCTACTAAGTGCCATTGAAAAGG‑TCTTAGTAGATTTATTAAATATATGCGTAGCAACATTATTTTTGTCTTGCCCATCTCGTGAAaataat < 1:1778842‑M1/91‑1 (MQ=255) TCTACTAAGTGCCATTGAAAAGG‑ACTTAGTAGATTTATTAAATATATGCGTAGCAACATTATTTTTGTCTTGCCCATCTCGTGAAaataat < 1:2953232‑M1/91‑1 (MQ=255) ctactaAGTGCCATTGAAAAGGacttagtagatttttgtttatataaccattttgagcaaacacgttatgaatagagaaggaataaacaat < 2:870744‑M2/91‑70 (MQ=255) CTACTAAGTGCCATTGAAAAGG‑ACTTAGTAGATTTATTAAATATATGCGTAGCAACATTATTTTTGTCTTGCCCATCTCGTGAAAataata < 2:2103877‑M1/91‑1 (MQ=255) CTACTAAGTGCCATTGAAAAGG‑ACTTAGTAGATTTATTAAATATATGCGTAGCAACATTATTTTTGTCTTGCCCATCTCGTGAAAataata < 1:2856261‑M1/91‑1 (MQ=255) tactaAGTGCCATTGAAAAGGacttagtagatttttgtttatataaccattttgagcaaacacgttatgactagagaaggaataaacaatt < 1:2568868‑M2/91‑71 (MQ=255) TACTAAGTGCCATTGAAAAGG‑ACTTAGTAGATTTATTAAATATATGCGTAGCAACATTATTTTTGTCTTGCCCATCTCGTGAAAATAAtac < 1:345784‑M1/91‑1 (MQ=255) actaAGTGCCATTGAAAAGGacttagtagatttttgtttatataaccattttgagcaaacacgttatgaatagagaaggaataaataatta < 2:3574316‑M2/91‑72 (MQ=255) actaAGTGCCATTGAAAAGGacttagtagatttttgtttatataaccattttgagcaaacacgttatgaatagagaaggaataaacaatta < 1:1898827‑M2/91‑72 (MQ=255) ACTAAGTGCCATTGAAAAGG‑ACTTAGTAGATTTATTAAATATATGCGTAGCAACATTATTTTTGTCTTGCCCATCTCGTGAAAATAAtact > 1:3535541‑M1/1‑91 (MQ=255) CTAAGTGCCATTGAAAAGG‑ACTTAGTAGATTTATTAAATATATGCGTAGCAACATTATTTTTGTCTTGCCCATCTCGTGAAAATAAtacta < 1:1612480‑M1/91‑1 (MQ=255) CTAAGTGCCATTGAAAAGG‑ACTTAGTAGATTTATTAAATATATGCGTAGCAACATTATTTTTGTCTTGCCCATCTCGTGAAAATAAtacta < 2:1333190‑M1/91‑1 (MQ=255) CTAAGTGCCATTGAAAAGG‑ACTTAGTAGATTTATTAAATATATGCGTAGCAACATTATTTTTGTCTTGCCCATCTCGTGAAAATAAtacta < 1:179316‑M1/91‑1 (MQ=255) CTAAGTGCCATTGAAAAGG‑ACTTAGTAGATTTATTAAATATATGCGTAGCAACATTATTTTTGTCTTGCCCATCTCGTGAAAATAAtacta < 2:2787875‑M1/91‑1 (MQ=255) CTAAGTGCCATTGAAAAGG‑ACTTAGTAGATTTATTAAATATATGCGTAGCAACATTATTTTTGTCTTGCCCATCTCGTGAAAATAAtacta < 1:2139310‑M1/91‑1 (MQ=255) TAAGTGCCATTGAAAAGG‑ACTTAGTAGATTTATTAAATATATGCGTAGCAACATTATTTTTGTCTTGCCCATCTCGTGAAAATAAtactac < 1:2226366‑M1/91‑1 (MQ=255) TAAGTGCCATTGAAAAGG‑ACTTAGTAGATTTATTAAATATATGCGTAGCAACATTATTTTTGTCTTGCCCATCTCGTGAAAATAAtactac > 1:2460988‑M1/1‑91 (MQ=255) cATTGAAAAGG‑ACTTAGTAGATTTATTAAATATATGCGTAGCAACATTATTTTTGTCTTGCCCATCTCGTGAAAATAATACTACATATAAt < 1:46927/91‑1 (MQ=255) ttGAAAAGGacttagtagatttttgtttatataaccattttgagcaaacacgttatgaatagagaaggaataaacaattacattatcaact > 1:1008347‑M2/1‑9 (MQ=255) ttGAAAAGG‑ACTTAGTAGATTTATTAAATATATGCGTAGCAACATTATTTTTGTCTTGCCCATCTCGTGAAAATAATACTACATATAATGc < 1:1640486/91‑1 (MQ=255) ttGAAAAGG‑ACTTAGTAGATTTATTAAATATATGCGTAGCAACATTATTTTTGTCTTGCCCATCTCGTGAAAATAATACTACATATAATGc < 1:1469897/91‑1 (MQ=255) gAAAAGGacttagtagatttttgtttatataaccattttgagcaaacacgttatgaatagagaaggaataaacaattacattatcaacttt < 2:3577910‑M2/91‑85 (MQ=255) caaaaGG‑ACTTAGTAGATTTATTAAATATATGCGTAGCAACATTATTTTTGTCTTGCCCATCTCGTGAAAATAATACTACATATAATGCCa < 2:3854873/90‑1 (MQ=255) aGG‑ACTTAGTAGATTTATTAAATATATGCGTAGCAACATTATTTTTGTCTTGCTCATCTCGTGAAAATAATACTACATATAATGCCAAata > 2:3071764/1‑91 (MQ=255) g‑ACTTAGTAGATTTATTAAATATATGCGTAGCAACATTATTTTTGTCTTGCCCATCTCGTGAAAATAATACTACATATAATGCCAAAtata > 2:3213544/1‑91 (MQ=255) | GATAATGTAATTGTTTATTCCTTCTCTATTCATAACGTGTTTGCTCAAAATGGTTATATAAACAAAAATCTACTAAGTGCCATTGAAAAGG‑ACTTAGTAGATTTATTAAATATATGCGTAGCAACATTATTTTTGTCTTGCCCATCTCGTGAAAATAATACTACATATAATGCCAAATATA > USA300TCH1516_ALE/1255902‑1256082 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |