| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | 1425261 = | 204 (1.070) | 15 (0.080) | 10/150 | NT | 7.8% | intergenic (‑166/+25) | pstC1/pstS | Phosphate transport system permease protein PstC 1/Phosphate‑binding protein PstS |
| ? | USA300TCH1516_ALE | 1425285 = | 164 (0.920) | intergenic (‑190/+1) | pstC1/pstS | Phosphate transport system permease protein PstC 1/Phosphate‑binding protein PstS | |||||
Only 100 of 253 total aligned reads displayed.
AAATCAGCGTCTCGATAAATCAAGCTTTGTACTCTAAATAATGATTCACCATCAAAATCATGTTTCAAGACACA‑TTTGAAATTGCGTCTTATTATTTTTTGTCTTCAGACTTTTTATCATCAGATTTCTTGTCGTCTGATTTTTGATTTTTATCAATAAATGCTTTTAAATCATCTAATTG > USA300TCH1516_ALE/1425195‑1425375 | ttgataaaaatcaaaaatcagacgacaagaaatctgatgataaaaagtctgaagacaaaaaataatAAGACACA‑TTTGAAATTGCGTCtta > 2:801070‑M1/67‑91 (MQ=255)aaaTCAGCGTCTCGATAAATCAAGCTTTGTACTCTAAATAATGATTCACCATCAAAATCATGTTTCAAGACACA‑TTTGAAATTGCGTCtta < 1:3666925/91‑1 (MQ=255)aaaTCAGCGTCTCGATAAATCAAGCTTTGTACTCTAAATAATGATTCACCATCAAAATCATGTTTCAAGACACA‑TTTGAAATTGCGTCtta < 1:2076879/91‑1 (MQ=255) ttgataaaaatcaaaaatcagacgacaagaaatctgatgataaaaagtctgaagacaaaaaataataagacacatttgaaattgcgtctta < 1:1337242‑M2/1‑1 (MQ=255) aTCAGCGTCTCGCTAAATCAAGCTTTGTACTCTAAATAATGATTCACCATCAAAATCATGTTTCAAGACACA‑TTTGAAATTGCGTCttatt > 1:2991039/1‑91 (MQ=255) aTCAGCGTCTCGATAAATCAAGCTTTGTACTCTAAATAATGATTCACCATCAAAATCATGTTTCAAGACACA‑TTTGAAATTGCGTCttatt < 1:560923/91‑1 (MQ=255) aTCAGCGTCTCGATAAATCAAGCTTTGTACTCTAAATAATGATTCACCATCAAAATCATGTTTCAAGACACA‑TTTGAAATTGCGTCttatt > 2:802771/1‑91 (MQ=255) tCAGCGTCTCGATAAATCAAGCTTTGTACTCTAAATAATGATTCACCATCAAAATCATGTTTCAAGACACA‑TTTGAAATTGCGTCttatta < 2:3263600/91‑1 (MQ=255) aGCGTCTCGATAAATCAAGCTTTGTACTCTAAATAATGATTCACCATCAAAATCATGTTTCAAGACACA‑TTTGAAATTGCGTCTTattatt < 2:1655782/91‑1 (MQ=255) aaaatcaaatatcagacgaaaagaaagcttatgataagaagtctgaatacaaaaaataatAAGACACA‑TTTGAAATTGCGTCTTATTAttt > 2:3290295‑M1/61‑91 (MQ=255) aaaaatcaaaaatcagacgacaagaaatctgatgataaaaagtctgaagacaaaaaataataagacacatttgaaattgcgtcttattatt < 2:1921144‑M2/6‑1 (MQ=255) aaaaatcaaaaatcagacgacaagaaatctgatgataaaaagtctgaagacaaaaaataataagacacatttgaaattgcgtcttattatt < 1:3636204‑M2/6‑1 (MQ=255) cGTCTCGATAAATCAAGCTTTGTACTCTAAATAATGATTCACCATCAAAATCATGTTTCAAGACACA‑TTTGAAATTGCGTCTTATTAtttt > 2:491101/1‑91 (MQ=255) cGATAAATCAAGCTTTGTACTCTAAATAATGATTCACCATCAAAATCATGTTTCAAGACACA‑TTTGAAATTGCGTCTTATTATTTTTTGTc > 2:2503484/1‑91 (MQ=255) cGATAAATCAAGCTTTGTACTCTAAATAATGATTCACCATCAAAATCATGTTTCAAGACACA‑TTTGAAATTGCGTCTTATTATTTTTTGTc > 2:1160349/1‑91 (MQ=255) gATAAATCAAGCTTTGTACTCTAAATAATGATTCACCATCAAAATCATGTTTCAAGACACA‑TTTGAAATTGCGTCTTATTATTTTTTGTCt < 2:1704049/91‑1 (MQ=255) aTAAATCAAGCTTTGTACTCTAAATAATGATTCACCATCAAAATCATGTTTCAAGACACA‑TTTGAAATTGCGTCTTATTATTTTTTGTCtt < 1:1960585/91‑1 (MQ=255) aTAAATCAAGCTTTGTACTCTAAATAATGATTCACCATCAAAATCATGTTTCAAGACACA‑TTTGAAATTGCGTCTTATTATTTTTTGTCtt > 1:2520179/1‑91 (MQ=255) tAAATCAAGCTTTGTACTCTAAATAATGATTCACCATCAAAATCATGTTTCAAGACACA‑TTTGAAATTGCGTCTTATTATTTTTTGTCTTc < 1:1574905/91‑1 (MQ=255) aaaTCAAGCTTTGTACTCTAAATAATGATTCACCATCAAAATCATGTTTCAAGACACA‑TTTGAAATTGCGTCTTATTATTTTTTGTCTTCa < 2:2704841/91‑1 (MQ=255) atcagacgacaagaaatctgatgataaaaagtctgaagacaaaaaataataagacacatttgaaattgcgtcttATTATTTTTTGTCTTCa < 1:2430182‑M2/17‑1 (MQ=255) aaTCAAGCTTTGTACTCTAAATAATGATTCACCATCAAAATCATGTTTCAAGACACA‑TTTGAAATTGCGTCTTATTATTTTTTGTCTTCAg < 1:1878506/91‑1 (MQ=255) aaTCAAGCTTTGTACTCTAAATAATGATTCACCATCAAAATCATGTTTCAAGACACA‑TTTGAAATTGCGTCTTATTATTTTTTGTCTTCAg < 1:336781/91‑1 (MQ=255) aTCAAGCTTTGTACTCTAAATAATGATTCACCATCAAAATCATGTTTCAAGACACA‑TTTGAAATTGCGTCTTATTATTTTTTGTCTTCAGa < 1:692304/91‑1 (MQ=255) tCAAGCTTTGTACTCTAAATAATGATTCACCATCAAAATCATGTTTCAAGACACA‑TTTGAAATTGCGTCTTATTATTTTTTGTCTTCAGAc < 1:59482/91‑1 (MQ=255) cAAGCTTTGTACTCTAAATAATGATTCACCATCAAAATCATGTTTCAAGACACA‑TTTGAAATTGCGTCTTATTATTTTTTGTCTTCAGACt < 1:489331/91‑1 (MQ=255) aaGCTTTGTACTCTAAATAATGATTCACCATCAAAATCATGTTTCAAGACACA‑TTTGAAATTGCGTCTTATTATTTTTTGTCTTCAGACtt > 1:2248700/1‑91 (MQ=255) aGCTTTGTACTCTAAATAATGATTCACCATCAAAATCATGTTTCAAGACACA‑TTTGAAATTGCGTCTTATTATTTTTTGTCTTCAGACttt > 1:671359/1‑91 (MQ=255) aGCTTTGTACTCTAAATAATGATTCACCATCAAAATCATGTTTCAAGACACA‑TTTGAAATTGCGTCTTATTATTTTTTGTCTTCAGACttt > 1:285689/1‑91 (MQ=255) aGCTTTGTACTCTAAATAATGATTCACCATCAAAATCATGTTTCAAGACACA‑TTTGAAATTGCGTCTTATTATTTTTTGTCTTCAGACttt > 2:117660/1‑91 (MQ=255) cgacaagaaatctgatgataaaaagtctgaagacaaaaaataataagacacatttgaaattgcgtcttATTATTTTTTGTCTTCAGACttt < 2:128123‑M2/23‑1 (MQ=255) tGTACTCTAAATAATGATTCACCATCAAAATCATGTTTCAAGACACA‑TTTGAAATTGCGTCTTATTATTTTTTGTCTTCAGACTTTTTatc > 1:1226096/1‑91 (MQ=255) gTACTCTAAATAATGATTCACCATCAAAATCATGTTTCAAGACACA‑TTTGAAATTGCGTCTTATTATTTTTTGTCTTCAGACTTTTTatca > 1:422683/1‑91 (MQ=255) tACTCTAAGTAATGATTCACCATCAAAATCATGTTTCAAGACACA‑TTTGAAATTGCGTCTTGTTATTTTTTGTCTTCAGACTTTTTatcat < 2:3375086/91‑1 (MQ=255) aCTCTAAATAATGATTCACCATCAAAATCATGTTTCAAGACACA‑TTTGAAATTGCGTCTTATTATTTTTTGTCTTCAGACTTTTTatcatc < 2:1783318/91‑1 (MQ=255) aCTCTAAATAATGATTCACCATCAAAATCATGTTTCAAGACACA‑TTTGAAATTGCGTCTTATTATTTTTTGTCTTCAGACTTTTTatcatc > 1:2299872/1‑91 (MQ=255) aCTCTAAATAATGATTCACCATC‑AAATCATGTTTCAAGACACA‑TTTGGAATTGCGTCTTATTATTTTTTGTCTTCAGACTTTTTAtcatca < 2:3000379/91‑1 (MQ=255) ctctAAATAATGATTCACCATCAAAATCATGTTTCAAGACACA‑TTTGAAATTGCGTCTTATTATTTTTTGTCTTCAGACTTTTTAtcatca < 2:616885/91‑1 (MQ=255) ctAAATAATGATTCACCATCAAAATCATGTTTCAAGACACA‑TTTGAAATTGCGTCTTATTATTTTTTGTCTTCAGACTTTTTATCATCAGa < 2:1450610/91‑1 (MQ=255) ctAAATAATGATTCACCATCAAAATCATGTTTCAAGACACA‑TTTGAAATTGCGTCTTATTATTTTTTGTCTTCAGACTTTTTATCATCAGa < 1:3568030/91‑1 (MQ=255) ctAAATAATGATTCACCATCAAAATCATGTTTCAAGACACA‑TTTGAAATTGCGTCTTATTATTTTTTGTCTTCAGACTTTTTATCATCAGa < 1:1340902/91‑1 (MQ=255) aataatGATTCACCATCAAAATCATGTTTCAAGACACA‑TTTGAAATTGCGTCTTATTATTTTTTGTCTTCAGACTTTTTATCATCAGAttt < 1:3847834/91‑1 (MQ=255) aataatGATTCACCATCAAAATCATGTTTCAAGACACA‑TTTGAAATTGCGTCTTATTATTTTTTGTCTTCAGACTTTTTATCATCAGAttt > 2:2688228/1‑91 (MQ=255) taatGATTCACCATCAAAATCATGTTTCAAGACACA‑TTTGAAATTGCGTCTTATTATTTTTTGTCTTCAGACTTTTTATCATCAGATTTCt > 2:3500372/1‑91 (MQ=255) tGATTCACCATCAAAATCATGTTTCAAGACACA‑TTTGAAATTGCGTCTTATTATTTTTTGTCTTCAGACTTTTTATCATCAGATTTCTTgt > 2:2203069/1‑91 (MQ=255) aTTCACCATCAAAATCATGTTTCAAGACACA‑TTTGAAATTGCGTCTTATTATTTTTTGTCTTCAGACTTTTTATCATCAGATTTCTTgtcg < 1:2560837/91‑1 (MQ=255) aTTCACCATCAAAATCATGTTTCAAGACACA‑TTTGAAATTGCGTCTTATTATTTTTTGTCTTCAGACTTTTTATCATCAGATTTCTTgtcg < 2:3620279/91‑1 (MQ=255) aTTCACCATCAAAATCATGTTTCAAGACACA‑TTTGAAATTGCGTCCTATTATTTTTTGTCTTCAGACTTTTTATCATCAGATTTCTTgtcg > 2:88641/1‑91 (MQ=255) ttCACCATCAAAATCATGTTTCAAGACACA‑TTTGAAATTGCGTCTTATTATTTTTTGTCTTCAGACTTTTTATCATCAGATTTCTTgtcgt < 1:1303750/91‑1 (MQ=255) ttCACCATCAAAATCATGTTTCAAGACACA‑TTTGAAATTGCGTCTTATTATTTTTTGTCTTCAGACTTTTTATCATCAGATTTCTTgtcgt > 1:3724996/1‑91 (MQ=255) ttCACCATCAAAATCATGTTTCAAGACACA‑TTTGAAATTGCGTCTTATTATTTTTTGTCTTCAGACTTTTTATCATCAGATTTCTTgtcgt < 1:2612691/91‑1 (MQ=255) cACCATCAAAATCATGTTTCAAGACACA‑TTTGAAATTGCGTCTTATTATTTTTTGTCTTCAGACTTTTTATCATCAGATTTCTTGTCGTCt > 2:2396917/1‑91 (MQ=255) aCCATCAAAATCATGTTTCAAGACACA‑TTTGAAATTGCGTCTTATTATTTTTTGTCTTCAGACTTTTTATCATCAGATTTCTTGTCGTCtg < 1:445246/91‑1 (MQ=255) aCCATCAAAATCATGTTTCAAGACACA‑TTTGAAATTGCGTCTTATTATTTTTTGTCTTCAGACTTTTTATCATCAGATTTCTTGTCGTCtg < 2:3049725/91‑1 (MQ=255) ccATCAAAATCATGTTTCAAGACACA‑TTTGAAATTGCGTCTTATTATTTTTTGTCTTCAGACTTTTTATCATCAGATTTCTTGTCGTCtga > 2:3559359/1‑91 (MQ=255) aTCAAAATCATGTTTCAAGACACA‑TTTGAAATTGCGTCTTATTATTTTTTGTTTTCATTCTTTTTATCATCAGATTTCTTGTCGTCtgatt > 2:1384236/1‑91 (MQ=255) tCAAAATCATGTTTCAAGACACA‑TTTGAAATTGCGTCTTATTATTTTTTGTCTTCAGACTTTTTATCATCAGATTTCTTGTCGTCtgattt < 1:3296113/91‑1 (MQ=255) aaaaTCATGTTTCAAGACACA‑TTTGAAATTGCGTCTTATTATTTTTTGTCTTCAGACTTTTTATCATCAGATTTCTTGTCGTCtgattttt < 2:2044736/91‑1 (MQ=255) aaaaTCATGTTTCAAGACACA‑TTTGAAATTGCGTCTTATTATTTTTTGTCTTCAGACTTTTTATCATCAGATTTCTTGTCGTCtgattttt < 2:1898893/91‑1 (MQ=255) aaaaTCATGTTTCAAGACACA‑TTTGAAATTGCGTCTTATTATTTTTTGTCTTCAGACTTTTTATCATCAGATTTCTTGTCGTCtgattttt < 1:1049639/91‑1 (MQ=255) aaaaTCATGTTTCAAGACACA‑TTTGAAATTGCGTCTTATTATTTTTTGTCTTCAGACTTTTTATCATCAGATTTCTTGTCGTCtgattttt < 2:1560130/91‑1 (MQ=255) aaaaTCATGTTTCAAGACACA‑TTTGAAATTGCGTCTTATTATTTTTTGTCTTCAGACTTTTTATCATCAGATTTCTTGTCGTCtgattttt < 1:1412964/91‑1 (MQ=255) aaTCATGTTTCAAGACACA‑TTTGAAATTGCGTCTTATTATTTTTTGTCTTCAGACTTTTTATCATCAGCTTTCTTGTCGTCtgatttttgt > 1:1902188/1‑90 (MQ=255) aaTCATGTTTCAAGACACA‑TTTGAAATTGCGTCTTATTATTTTTTGTCTTCAGACTTTTTATCATCAGATTTCTTGTCGTCtgatttttga > 1:400464/1‑91 (MQ=255) aTCATGTTTCAAGACACA‑TTTGAAATTGCGTCTTATTATTTTTTGTCTTCAGACTTTTTATCATCAGATTTCTTGTCGTCtgatttttgat > 2:1325889/1‑91 (MQ=255) tCATGTTTCAAGACACA‑TTTGAAATTGCGTCTTATTATTTTTTGTCTTCAGACTTTTTATCATCAGATTTCTTGTCGTCtgatttttgatt > 2:1602487/1‑91 (MQ=255) tCATGTTTCAAGACACA‑TTTGAAATTGCGTCTTATTATTTTTTGTCTTCAGACTTTTTATCATCAGATTTCTTGTCGTCtgatttttgatt < 2:179476/91‑1 (MQ=255) aaataatAAGACGCAATTTCAAAT‑GTGTCTTATTATTTTTTGTCTTCAGACTTTTTATCATCAGATTTCTTGTCGTCtgatttttgatttt < 1:1477660‑M1/84‑1 (MQ=255) aTGTTTCAAGACACA‑TTTGAAATTGCGTCTTATTATTTTTTGTCTTCAGACTTTTTATCATCAGATTTCTTGTCGTCtgatttttgatttt > 1:1186671/1‑91 (MQ=255) tttCAAGACACA‑TTTGAAATTGCGTCTTATTATTTTTTGTCTTCAGACTTTTTATCATCAGATTTCTTGTCGTCTGATTTTTGATTTTTAt > 2:70287/1‑91 (MQ=255) taatAAGACGCAATTTCAAAT‑GTGTCTTATTATTTTTTGTCTTCAGACTTTTTATCATCAGATTTCTTGTCGTCTGATTTTTGATTTTTAt < 2:565948‑M1/87‑1 (MQ=255) ttCAAGACACA‑TTTGAAATTGCGTCTTATTATTTTTTGTCTTCAGACTTTTTATCATCAGATTTCTTGTCGTCTGATTTTTGATTTTTATc > 2:2113007/1‑91 (MQ=255) tCAAGACACA‑TTTGAAATTGCGTCTTATTATTTTTTGTCTTCAGACTTTTTATCATCAGATTTCTTGTCGTCTGATTTTTGATTTTTATCa > 2:509453/1‑91 (MQ=255) tCAAGACACA‑TTTGAAATTGCGTCTTATTATTTTTTGTCTTCAGACTTTTTATCATCAGATTTCTTGTCGTCTGATTTTTGATTTTTATCa < 1:995208/91‑1 (MQ=255) tCAAGACACA‑TTTGAAATTGCGTCTTATTATTTTTTGTCTTCAGACTTTTTATCATCAGATTTCTTGTCGTCTGATTTTTGATTTTTATCa < 2:1410515/91‑1 (MQ=255) aataagacgcaatttcaaatgtgtcttATTATTTTTTGTCTTCAGACTTTTTATCATCAGATTTCTTGTCGTCTGATTTTTGATTTTTATc > 1:604857‑M2/28‑91 (MQ=255) cAAGACACA‑TTTGAAATTGCGTCTTATTATTTTTTGTCTTCAGACTTTTTATCATCAGATTTCTTGTCGTCTGATTTTTGATTTTTATCaa > 2:1249537/1‑91 (MQ=255) cAAGACACA‑TTTGAAACTGCGTCTTATTATTTTTTGTCTTCAGACTTTTTATCATCAGATTTCTTGTCGTCTGATTTTTGATTTTTATCaa < 2:3701059/91‑1 (MQ=255) taagacgcaatttcaaatgtgtcttATTATTTTTTGTCTTCAGACTTTTTATCATCAGATTTCTTGTCGTCTGATTTTTGATTTTTATCaa > 2:801274‑M2/26‑91 (MQ=255) taagacgcaatttcaaatgtgtcttATTATTTTTTGTCTTCAGACTTTTTATCATCAGATTTCTTGTCGTCTGATTTTTGATTTTTATCaa > 1:311253‑M2/26‑91 (MQ=255) AAGACACA‑TTTGAAATTGCGTCTTATTATTTTTTGTCTTCAGACTTTTTATCATCAGATTTCTTGTCGTCTGATTTTTGATTTTTATCAAt < 1:174494‑M1/91‑1 (MQ=255) AGACACA‑TTTGAAATTGCGTCTTATTATTTTTTGTCTTCAGACTTTTTATCATCAGATTTCTTGTCGTCTGATTTTTGATTTTTATCAATa > 2:136543‑M1/1‑91 (MQ=255) AGACACA‑TTTGAAATTGCGTCTTATTATTTTTTGTCTTCAGACTTTTTATCATCAGATTTCTTGTCGTCTGATTTTTGATTTTTATCAATa > 1:491452‑M1/1‑91 (MQ=255) AGACACA‑TTTGAAATTGCGTCTTATTATTTTTTGTCTTCAGACTTTTTATCATCAGATTTCTTGTCGTCTGATTTTTGATTTTTATCAATa > 2:2902735‑M1/1‑91 (MQ=255) GACACA‑TTTGAAATTGCGTCTTATTATTTTTTGTCTTCAGACTTTTTATCATCAGATTTCTTGTCGTCTGATTTTTGATTTTTATCAATaa > 2:3724996‑M1/1‑91 (MQ=255) ACACA‑TTTGAAATTGCGTCTTATTATTTTTTGTCTTCAGACTTTTTATCATCAGATTTCTTGTCGTCTGATTTTTGATTTTTATCAATaaa > 2:1319481‑M1/1‑91 (MQ=255) ca‑TTTGAAATTGCGTCTTATTATTTTTTGTCTTCAGACTTTTTATCATCAGATTTCTTGTCGTCTGATTTTTGATTTTTATCAATAAATGc > 1:829904/1‑91 (MQ=255) a‑TTTGAAATTGCGTCTTATTATTTTTTGTCTTCAGACTTTTTATCATCAGATTTCTTGTCGTCTGATTTTTGATTTTTATCAATAAATGCt > 1:2836431/1‑91 (MQ=255) ttGAAATTGCGTCTTATTATTTTTTGTCTTCAGACTTTTTATCATCAGATTTCTTGTCGTCTGATTTTTGATTTTTATCAATAAATGCttt < 2:3157728/91‑1 (MQ=255) ttGAAATTGCGTCTTATTATTTTTTGTCTTCAGACTTTTTATCATCAGATTTCTTGTCGTCTGATTTTTGATTTTTATCAATAAATGCttt < 2:2794213/91‑1 (MQ=255) aTTGCGTCTTATTATTTTTTGTCTTCAGACTTTTTATCATCAGATTTCTTGTCGTCTGATTTTTGATTTTTATCAATAAATGCTTTTAAat < 1:1601898/91‑1 (MQ=255) aTTGCGTCTTATTATTTTTTGTCTTCAGACTTTTTATCATCAGATTTCTTGTCGTCTGATTTTTGATTTTTATCAATAAATGCTTTTAAat < 2:2282368/91‑1 (MQ=255) aTTGCGGCTTATTATTTTTTGTCTTCAGACTTTTTATCATCAGATTTCTTGTCGTCTGATTTTTGATTTTTATCAATAACTGCTTTTatat > 2:2592455/1‑91 (MQ=255) tGCGTCTTATTATTTTTTGTCTTCAGACTTTTTATCATCAGATTTCTTGTCGTCTGATTTTTGATTTTTATCAATAAATGCTTTTAAatca > 2:3849912/1‑91 (MQ=255) tcttATTATTTTTTGTCTTCAGACTTTTTATCATCAGATTTCTTGTCGTCTGATTTTTGATTTTTATCAATAAATGCTTTTAAATCATCTa > 1:3811193‑M2/5‑91 (MQ=255) tcttATTATTTTTTGTCTTCAGACTTTTTATCATCAGATTTCTTGTCGTCTGATTTTTGATTTTTATCAATAAATGCTTTTAAATCATCTa > 2:1209620‑M2/5‑91 (MQ=255) cttATTATTTTTTGTCTTCAGACTTTTTATCATCAGATTTCTTGTCGTCTGATTTTTGATTTTTATCAATAAATGCTTTTAAATCATCTaa < 1:3422475‑M2/88‑1 (MQ=255) cttATTATTTTTTGTCTTCAGACTTTTTATCATCAGATTTCTTGTCGTCTGATTTTTGATTTTTATCAATAAATGCTTTTAAATCATCTaa > 1:970531‑M2/4‑91 (MQ=255) cttATTATTTTTTGTCTTCAGACTTTTTATCATCAGATTTCTTGTCGTCTGATTTTTGATTTTTATCAATAAATGCTTTTAAATCATCTaa < 2:3173499‑M2/88‑1 (MQ=255) tATTATTTTTTGTCTTCAGACTTTTTATCATCAGATTTCTTGTCGTCTGATTTTTGATTTTTATCAATAAATGCTTTTAAATCATCTAAtt < 1:916613‑M2/90‑1 (MQ=255) | AAATCAGCGTCTCGATAAATCAAGCTTTGTACTCTAAATAATGATTCACCATCAAAATCATGTTTCAAGACACA‑TTTGAAATTGCGTCTTATTATTTTTTGTCTTCAGACTTTTTATCATCAGATTTCTTGTCGTCTGATTTTTGATTTTTATCAATAAATGCTTTTAAATCATCTAATTG > USA300TCH1516_ALE/1425195‑1425375 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |