| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_012417 | 2316 = | 1149 (1.000) | 3 (0.000) | 3/248 | NT | 0.27% | coding (359/582 nt) | USA300HOU_RS14900 | hypothetical protein |
| ? | NC_012417 | 2352 = | 1124 (1.020) | coding (323/582 nt) | USA300HOU_RS14900 | hypothetical protein | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
AAAGACGGAACAGCTAAAGATGTTAATCTAGAAAATGCCAAATCTCGATATGGATATGTTCCTGAAGGATTCCAAAAACTAAAAAACGACATAGAGAATAAAAAGAAAACTAGTTCAATATCACCTAGAGCAGTTGGTGGGAACTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_012417/2461‑2316‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaactaGTTTTCTTTTTATTCTCTATGTCGTTTTTTAGTTTTTGGAATCCTTCAGGAACATATCCATATCGAGATTTGGCATTTTCTAGATTAACATCTTTAGCTGTTCCGTCTTTATCTAAAATAATAATTTTGCCATATATGT > NC_012417/2352‑2490 AAAGACGGAGTAGCTAAATATGTTAATCTAGAATATGCCTACTTTCGGTATGGATATGTTCCTGAAGGATTAAAAAAACTAAAAAACGACATAGAGAATAAAAAGAAAACTAGTTCAATATCACCTAGAGCAGTTGGTGGG < 2:252794/141‑1AAAGACGGAACAGCTAAAGATGTTAATCTAGAAAATGCCAAATCTCGATATGGATATGTTCCTGAAGGATTCCAAAAACTAAAAAACGACATAGAGAATAAAAAGAAAACTAGTTCAATATCACCTAGAGCAGTTGGTGGG < 1:653544/141‑1AAAGACGGAACAGCTAAAGATGTTAATCTAGAAAATGCCAAATCTCGATATGGATATGTTCCTGAAGGATTCCAAAAACTAAAAAACGACATAGAGAATAAAAAGAAAACTAGTTCAATATCACCTAGAGCAGTTGGTGGG < 2:222726/141‑1AAAGACGGAACAGCTAAAGATGTTAATCTAGAAAATGCCAAATCTCGATATGGATATGTTCCTGAAGGATTCCAAAAACTAAAAAACGACATAGAGAATAAAAAGAAAACTAGTTCAATATCACCTAGAGCAGTTGGTGGG < 1:580424/141‑1AAAGACGGAACAGCTAAAGATGTTAATCTAGAAAATACCAAATCTCGATATGGATATGTTCCTGAAGGATTCCAAAAACTAAAAAACGACATAGAGAATAAAAAGAAAACTAGTTCAATATCACCTTGAGCAGTTGGTGGG < 1:386055/141‑1 aaaaccGAACAGCTACAGATGTTAATCTACAAAATGCCAAATCTCGTTATGGATATGTTCCTGAAGGATTACAAAAACAAAAAAACGACATAGAGAATAAAAAGAAAACTAGTTCAATATCACCTAGAGCAGTTGGTGGGA < 2:374732/135‑1 AAGACGGAACAGCTAAAGATGTTAATCTAGAAAATGCCAAATCTCGATATGGATATGTTCCTGAAGGATTCCAAAAACTAAAAAACGACATAGAGAATAAAAAGAAAACTAGTTCAATATCACCTAGAGCAGTTGGTGGGA > 2:22027/1‑141 AAGACGGAACAGCTAAAGATGTTAATCTAGAAAATGCCAAATCTCGATATGGATATGTTCCTGAAGGATTCCAAAAACTAAAAAACGACATAGAGAATAAAAAGAAAACTAGTTCAATATCACCTAGAGCAGTTGGTGGGA > 1:253012/1‑141 AAGACGGAACAGCTAAAGATGTTAATCTAGAAAATGCCAAATCTCGATATGGATATGTTCCTGAAGGATTCCAAAAACTAAAAAACGACATAGAGAATAAAAAGAAAACTAGTTCAATATCACCTAGAGCAGTTGGTGGGA > 1:550077/1‑141 AAGACGGAACAGCTAAAGATGTTAATCTAGAAAATGCCAAATCTCGATATGGATATGTTCCTGAAGGATTCCAAAAACTAAAAAACGACATAGAGAATAAAAAGAAAACTAGTTCAATATCACCTAGAGCAGTTGGTGGGA > 2:506528/1‑141 AAGACGGAACAGCTAAAGATGTTAATCTAGAAAATGCCAAATCTCGATATGGATATGTTCCTGAAGGATTCCAAAAACTAAAAAACGACATAGAGAATAAAAAGAAAACTAGTTCAATATCACCTAGAGCAGTTGGTGGGA > 1:410228/1‑141 AAGACGGAACAGCTAAAGATGTTAATCTAGAAAATGCCAAATCTCGATATGGATATGTTCCTGAAGGATTCCAAAAACTAAAAAACGACATAGAGAATAAAAAGAAAACTAGTTCAATATCACCTAGAGCAGTTGGTGGGA > 1:335703/1‑141 AAGACGGAACAGCTAAAGATGTTAATCTAGAAAATGCCAAATCTCGATATGGATATGTTCCTGAAGGATTCCAAAAACTAAAAAACGACATAGAGAATAAAAAGAAAACTAGTTCAATATCACCTAGAGCAGTTGGTGGGA > 2:147835/1‑141 AAGACGGAACAGCTAAAGATGTTAATCTAGAAAATGCCAAATCTCGATATGGATATGTTCCTGAAGGATTCCAAAAACTAAAAAACGACATAGAGAATAAAAAGAAAACTAGTTCAATATCACCTAGAGCAGTTGGTGGGA > 2:68552/1‑141 AAGACGGAACAGCTAAAGATGTTAATCTAGAAAATGCCAAATCTCGATATGGATATGTTCCTGAAGGATTCCAAAAACTAAAAAACGACATAGAGAATAAAAAGAAAACTAGTTCAATATCACCTAGAGCAGTTGGTGGGA > 2:246560/1‑141 AAGACGGAACAGCTAAAGATGTTAATCTAGAAAATGCCAAATCTCGATATGGATATGTTCCTGAAGGATTCCAAAAACTAAAAAACGACATAGAGAATAAAAAGAAAACTAGTTCAATATCACCTAGAGCAGTTGGTGGGA > 1:375535/1‑141 AAGACGGAACAGCTAAAGATGTTAATCTAGAAAATGCCAAATCTCGATATGGATATGTTCCTGAAGGATTCAAAACACTAAAAAACGACATAGAGAATAAAAAGAAAACTAGTTCAATATCAACTAGAGCAGTTGGTGGGA > 1:161906/1‑141 AAGACGGAACAGCTAAAGATGTTAATCTAGAAAATGCCAAATCTCGATATGGATATGTTCCTGAAGGAGTCCAAAAACTAAAAAACGAAATAGAGAATGAAAAGAAAACTAGTTAAATGTCACCTAGAACAGTTGGTGGGg > 2:551477/1‑140 aaaccGAACAGCTAAAGATGTTAAGCTAGAAAATGCCAAATCTCGATATGGATATGTTCCTGAAGGATTCCAAAACCTAAAAAACGACATAGAGAATAAAAAGAAAACTAGTTCAATATCACCTAGAGCAGTTGGTGGGAA < 1:329976/136‑1 AGACGGAACAGCTAAAGATGTTAATCTAGAAAATGCCAAATCTCGATATGGATATGTTCCTGAAGGATTCCAAAAACTAAAAAACGACATAGAGAATAAAAAGAAAACTAGTTCAATATCACCTAGAGCAGTTGGTGGGAA < 1:55194/141‑1 AGACGGAACAGCTAAAGATGTTAATCTAGAAAATGCCAAATCTCGATATGGATATGTTCCTGAAGGATTCCAAAAACTAAAAAACGACATAGAGAATAAAAAGAAAACTAGTTCAATATCACCTAGAGCAGTTGGTGGGAA > 1:666090/1‑141 AGACGGAACAGCTAAAGATGTTAATCTAGAAAATGCCAAATCTCGATATGGATATGTTCCTGAAGGATTCCAAAAACTAAAAAACGACATAGAGAATAAAAAGAAAACTAGTTCAATATCACCTAGAGCAGTTGGTGGGAA < 1:359565/141‑1 AGACGGAACAGCTAAAGATGTTAATCTAGAAAATGCCAAATCTCGATATGGATATGTTCCTGAAGGATTCCAAAAACTAAAAAACGACATAGAGAATAAAAAGAAAACTAGTTCAATATCACCTAGAGCAGTTGGTGGGAA < 1:199344/141‑1 GACGGAACAGCTAAAGATGTTAATCTAGAAAATGCCAAATCTCGATATGGATATGTTCCTGGAGGATTCCAAAAACTAAAAAACGACATAGAGAATAAAAAGAAAACTAGTTCAATATCACCTAGAGCAGTGGGTGGGAAC > 1:182052/1‑141 GACGGAACAGCTAAAGATGTTAATCTAGAAAATGCCAAATCTCGATATGGATATGTTCCTGAAGGATTCCAAAAACTAAAAAACGACATAGAGAATAAAAAGAAAACTAGTTCAATATCACCTAGAGCAGTTGGTGGGAAC > 2:608549/1‑141 GACGGAACAGCTAAAGATGTTAATCTAGAAAATGCCAAATCTCGATATGGATATGTTCCTGAAGGATTCCAAAAACTAAAAAACGACATAGAGAATAAAAAGAAAACTAGTTCAATATCACCTAAAGCAGTGGGTGGGAAC > 2:32605/1‑141 GACGGAACAGCTAAAGATGTTAATCTAGAAAATGCCAAATCTCGAGATGGATATGTTCCTGAAGGATTCCAAAAACTAAAAAACGAAATAGAGAATAAAAAGAAAACTAGTTCAATATCACCTAGAGCAGTTGGTGGGAAC > 2:533326/1‑141 ACGGAACAGCTAAAGATGTTAATCTAGAAAATGCCAAATCTCGATATGGATATGTTCCTGAAGGATTCCAAAAACTAAAAAACGACATAGAGAATAAAAAGAAAACTAGTTCAATATCACCTAGAGCAGTTGGTGGGAACT > 1:525207/1‑141 ACGGAACAGCTAAAGATGTTAATCTAGAAAATGCCAAATCTCGATATGGATATGTTCCTGAAGGATTCCAAAAACTAAAAAACGACATAGAGAATAAAAAGAAAACTAGTTCAATATCACCTAGAGCAGTTGGTGGGAACT > 1:685871/1‑141 ACGGAACAGCTAAAGATGTTAATCTAGAAAATGCCAAATCTCGATATGGATATGTTCCTGAAGGATTCCAAAAACTAAAAAACGACATAGAGAATAAAAAGAAAACTAGTTCAATATCACCTAGAGCAGTTGGTGGGAACT > 1:186848/1‑141 CGGAACAGCTAAAGATGTTAATCTAGAAAATGCCAAATCTCGATATGGATATGTTCCTGAAGGATTCCAAAAACTAAAAAACGACATAGAGAATAAAAAGAAAACTAGTTCAATATCACCTAGAGCAGTTGGTGGGAACTA > 1:67266/1‑141 CGGAACAGCTAAAGATGTTAATCTAGAAAATGCCAAATCTCGATATGGATATGTTCCTGAAGGATTCCAAAAACTAAAAAACGACATAGAGAATAAAAAGAAAACTAGTTCAATATCACCTAGAGCAGTTGGTGGGAACTA > 1:495692/1‑141 CGGAACAGCTAAAGATGTTAATCTAGAAAATGCCAAATCTCGATATGGATATGTTCCTGAAGGATTCCAAAAACTAAAAAACGACATAGAGAATAAAAAGAAAACTAGTTCAATATCACCTAGAGCAGTTGGTGGGAACTA > 1:283755/1‑141 CGGAACAGCTAAAGATGTTAATCTAGAAAATGCCAAATCTCGATATGGATATGTTCCTGAAGGATTCCAAAAACTAAAAAACGACATAGAGAATAAAAAGAAAACTAGTTCAATATCACCTAGAGCAGTTGGTGGGAACTA > 2:598549/1‑141 CGGAACAGCTAAAGATGTTAATCTAGAAAATGCCAAATCTCGATATGGATATGTTCCTGAAGGATTCCAAAAACTAAAAAACGACATAGAGAATAAAAAGAAAACTAGTTCAATATCACCTAGAGCAGTTGGTGGGAACTA < 1:64482/141‑1 CGGAACAGCTAAAGATGTTAATCTAGAAAATGCCAAATCTCGATATGGATATGTTCCTGAAGGATTCCAAAAACTAAAAAACGACATAGAGAATAAAAAGAAAACTAGTTCAATATCACCTAGACCACTTGGTGGGAACTc > 2:97339/1‑140 CGGAACAGCTAAAGATGTTAATCTAGAAAATGCCAAATCTCGATATGGATATGTTCCTGAAGGATTCCAAAAACTAAAAAACGACATAGAGAATAAAAAGAAAACTAGTTCAATATCAACTAGAGCAGTTGGTGGGAACTA > 2:446406/1‑141 GGAACAGCTAAAGATGTTAATCTAGAAAATGCCAAATCTCGATATGGATATGTTCCTGAAGGATTCCAAAAACTAAAAAACGACATAGAGAATAAAAAGAAAACTAGTACAATATCACCTAGAGCAGTTGGGGGGAACTAa > 2:204380/1‑140 AACAGCTAAAGATGTTAATCTAGAAAATGCCAAATCTCGATATGGATATGTTCCTGAAGGATTCCAAAAACTAAAAAACGACATAGAGAATAAAAAGAAAACTAGTTAAATATCACCTAGAGCAGTTGGTGGGCACTccaa > 1:421448/1‑137 CAGCTAAAGATGTTAATCTAGAAAATGCCAAATCTCGATATGGAGATGTTCCGGAAGGATTCCAAAAACTAAAAAACGACATAGAGAATAAAAAGAAAGCTAGTTCAATATCACCTAGACCGGTTGGTGGGAACTAacgaa > 1:288603/1‑136 CTAGTTCAATATCACCTAGAGCAGTTGGTGGGAACTAGTTTTCTTTTTATTCTCTATGTCGTTTTTTAGTTTTTGGAATCCTTCAGGAACATATCCATATCGAGATTTGGCATTTTCTAGATTAACATCTTTAGCTGTTCC > 2:214983/1‑141 TAGTTCAATATCACCTAGAGCAGTTGGTGGGAACTAGTTTTCTTTTTATTCTCTCTGTCGTTTTTTAGTTTTTGGAATCCTTCAGGAACATATCCATATCGAGATTTGGCATTTTCTAGATTAAGATCTTTAGCTGTTGCG > 1:343081/1‑141 AGCAGTTGGTGGGAACTAGTTTTCTTTTTATTCTCTATGTCGTTTTTTAGTTTTTGGAATCCTTCAGGAACATATCCATATCGAGATTTGGCATTTTCTAGATTAACATCTTTAGCTGTTCCGTCTTTATCTAAAATAATA < 1:214983/141‑1 GAACTAGTTTTCTTTTTTTTTTTTTTTTCGTTTTTTAGATTTTGAAATCCTTCAGGAACATATCCATATCGAGATTTGGCATTTTCTAGATTAACATCTTTATCTGTTCCGTCTTTATCTTAAATAATTATTTTGCCATAT > 2:462696/1‑141 GAACTAGTTTTCTTTTTATTCTCTATGTCGTTTTTTAGTTTTTGGTATCCTTCAGGAACATATCCATATCGAGATTTGGCATTTTCTAGATTAACATCTTTAGCTGTTCCGTCTTTATCTAAAATAATAATTTTGCCATAT > 1:367626/1‑141 GAACTAGTTTTCTTTTTATTCTCTATGTCGTTTTTTAGTTTTTGGAATCCTTCAGGAACATATCCATATCGAGATTTGGCATTTTCTAGATTACCATCTTTAGCTGTTCCGTCTTTATCTAAAATAATAATTTTGCCATAT > 2:589563/1‑141 GAACTAGTTTTCTTTTTATTCTCTATGTCGTTTTTTAGTTTTTGGAATCCTTCAGGAACATATCCATATCGAGATTTGGCATTTTCTAGATTAACATCTTTAGCTGTTCCGTCTTTATCTAAAATAGTACTTTTGCCATAa > 2:18224/1‑140 GAACTAGTTTTCTTTTTATTCTCTATGTCGTTTTTTAGTTTTTGGAATCCTTCAGGAACATATCCATATCGAGATTTGGCATTTTCTAGATTAACATCTTTAGCTGTTCCGTCTTTATCTAAAATAATAATTTTGCCATAT > 1:588208/1‑141 GAACTAGTTTTCTTTTTATTCTCTATGTCGTTTTTTAGTTTTTGGAATCCTTCAGGAACATATCCATATCGAGATTTGGCATTTTCTAGATTAACATCTTTAGCTGTTCCGTCTTTATCTAAAATAATAATTTTGCCATAT > 1:97509/1‑141 GAACTAGTTTTCTTTTTATTCTCTATGTCGTTTTTTAGTTTTTGGAATCCTTCAGGAACATATCCATATCGAGATTTGGCATTTTCTAGATTAACATCTTTAGCTGTTCCGTCTTTATCTAAAATAATAATTTTGCCATAT > 1:116842/1‑141 GAACTAGTTTTCTTTTTATTCTCTATGTCGTTTTTTAGTTTTTGGAATCCTTCAGGAACATATCCATATCGAGATTTGGCATTTTCTAGATTAACATCTTTAGCTGTTCCGGCTTTATCTAAAATAAAAATTTTGCCATAT > 1:261320/1‑141 GAACTAGTTTTCTTTTTATTCTCTATGTCGTTTTTTAGTTTTTGGAATCCTTCAGGAACATATCCATATCGAGATTTGGCATTTTATAGAGTAACACCTTTAGCTGTTCCGCCTTTATCTAAAATAATAATTTTGCCATAT > 1:131203/1‑141 GAACTAGTTTTCTTTTTATTCTCTATGTCGTTTTTTAGTTTTTGGAATCCTTAAGGAACATAGCCATATCGAGATTTGGCATTTTCTAGCTTAACATCCTTAGCTGTTCCTTCTTTATCTACAATAATAATCTTcacaaat > 2:297809/1‑134 atCTATTTTTCTTTTTATTCTCCATGTCTTTTTTTAGTTTTTGGAATCCTTCAGGAACATATCCATATCGAGATTTGGCATTTTCTAGATTAACATCTTTAGCTGTTCCGTCTTTATCTAAAATAATAATTTTGCCATATA < 2:486057/139‑1 AACTAGTTTTCTTTTTTTTTTTTATTTCGTTTTTTAGTTTTTGGAATCCTTCAGGAACATATCCATATCGAGATTTGGCATTTTCTCGATTAACATCTTTAGCTGTTCCGTCTTTATTTATAATATTTATTTTGTCATATt > 2:414771/1‑140 AACTAGTTTTCTTTTTATTCTCTATGTCGTTTTTTAGTTTTTGGAATCCTTCAGGAACATATCCATATCGAGATTTGGCATTTTCTAGATTAACATCTTTAGCTGTTCCGTCTTTATCTAAAATAATAATTTTGCCATATA > 2:218469/1‑141 AACTAGTTTTCTTTTTATTCTCTATGTCGTTTCTTAGTTTTTGGAATCCTTCAGGAACATATCCATATCGAGATTTGGCATTTTCTACATTAACATCTTTAGCTGTTCCGTCTTTATCTAAAATAATAATTTTGCCATATA < 1:465769/141‑1 AACTAGTTTTCTTTTTATTCTCTAGGTCGTTTTTTAGTTTTTGGAATCCTTCAGGAACATATCCATATCGAGATTTGGCATTTTCTAGATTAACGTCTTTAGCTGTTCCGTCTTTATCTAAAATAATAATTTTGCCATATA > 1:507255/1‑141 ACTAGTTTTCTTTTTATTCTCTATGTCGTTTTTTTTTTTTTTTTATCCTTCAGGAACATAACCATATCGAGATTTGGCATTTTCTAGATTAACATCTTTATCTGTTCCGCCTTTATCTAAAATAATAATTTTTTCATATAT > 2:210095/1‑141 ACTAGTTTTCTTTTTATTCTCTATGTCGTTTTTTTTTTTTTTTTATACTTCAGGAACATATCCATATCGTGATTTGGCATTTTCTAGATTAACATCTTTAGCTGTTCCTTCTTTATCTAAAATAATATTTTTTCCATTTAT > 2:154554/1‑141 ACTAGTTTTCTTTTTATTCTCTATGTCGTTTTTTTTTTTTATTTATCATTCAGGAACATATCCATATCGAGATTTGGCATTTTCTAGATTAACATCTTTCGCTGTTCCGTCTTTATTTAAAATAATGTTTTTGTCATttct > 2:450809/1‑137 ACTAGTTTTCTTTTTATTCTCTATGTCGTTTTTTAGTTTTTGGAATCCTTCAGTAACATATCCATATCGAGATTTGGCATTTTCTAGATTAACATCTTTAGCTGTTCCGTCTTTATCTAAAATAATAATTTTGCCAGATAT > 1:466362/1‑141 ACTAGTTTTCTTTTTATTCTCTATGTCGTTTTTTAGTTTTTGGAATCCTTCAGGAACATATCCATATCGAGATTTGGCATTTTCTAGATTAACATCTTTAGCTGTTCCGTCTTTATCTAAAATAATACTTTTACCATATAT > 2:69917/1‑141 ACTAGTTTTCTTTTTATTCTCTATGTCGTTTTTTAGTTTTTGGAATCCTTCAGGAACATATCCATATCGAGATTTGGCATTTTCTAGATTAACATCTTTAGCTGTTCCGTCTTTATCTAAAATAATAATTTTGCCATATAg > 2:412280/1‑140 ACTAGTTTTCTTTTTATTCTCTATGTCGTTTTTTAGTTTTTGGAATCCTTCAGGAACATATCCATATCGAGATTTGGCATTTTCTAGATTAACATCTTTAGCTGTTCCGTCTTTATCTAAAATAATAATTTTGCCATATAT > 1:459236/1‑141 ACTAGTTTTCTTTTTATTCTCTATGTCGTTTTTTAGTTTTTGGAATCCTTCAGGAACATATCCATATCGAGATTTGGCATTTTCTAGATTAACATCTTTAGCTGTTCCGTCTTTATCTAAAATAATAATTTTGCCATATAT > 1:377078/1‑141 ACTAGTTTTCTTTTTATTCTCTATGTCGTTTTTTAGTTTTTGGAATCCTTCAGGAACATATCCATATCGAGATTTGGCATTTTCTAGATTAACATCTTTAGCTGTTCCGTCTTTATCTAAAATAATAATTTTGCCATATAT > 1:152159/1‑141 ACTAGTTTTCTTTTTATTCTCTATGTCGTTTTTTAGTTTTTGGAATCCTTCAGGAACATATCCATATCGAGATTTGGCATTTTCTAGATTAACATCTTTACCCGTTCCGTCTTTATCTAAAATAATAATTTTGCCATATAT > 1:299181/1‑141 ACTAGTTTTCTTTTTATTCTCTATGTCGTTTTTTAGTTTTTGGAATCCTTCAGGAACATATCCATATCGAGATTTGGCATTTTCTAGATTAACATCGTTAGCGGTTCCGTCTTACTTGCTAATAATAATTTTGCCGTATAT > 1:296416/1‑141 CTAGTTTTCTTTTTATTCTCTATGTCGTTTTTTAGTTTTTGGAATCCTTCAGGAACATATCCATATCGAGATTTGGCGTTTTCTAGATTAACATATTTAGCTGTTCCGTCTATATCTCAAATAATAATTATGCAATAGATa > 1:377510/1‑140 TAGTTTTCTTTTTATTCTCTATGTCGTTTTTTAGTTTTTGGAATCCTTCAGGAACATATCCATATCGAGATTTGGCATTTTCTAGATTAACATCTTTAGCTGTTCCGTCTTTATCTAAAATAATAATTTTTCCATATATGT < 1:502602/141‑1 AAAGACGGAACAGCTAAAGATGTTAATCTAGAAAATGCCAAATCTCGATATGGATATGTTCCTGAAGGATTCCAAAAACTAAAAAACGACATAGAGAATAAAAAGAAAACTAGTTCAATATCACCTAGAGCAGTTGGTGGGAACTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_012417/2461‑2316‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaactaGTTTTCTTTTTATTCTCTATGTCGTTTTTTAGTTTTTGGAATCCTTCAGGAACATATCCATATCGAGATTTGGCATTTTCTAGATTAACATCTTTAGCTGTTCCGTCTTTATCTAAAATAATAATTTTGCCATATATGT > NC_012417/2352‑2490 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |