New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | USA300TCH1516_ALE | 52495 = | 115 (0.950) | 146 (1.220) +T |
7/278 | 7.3 | 57.9% | intergenic (+105/‑568) | USA300HOU_RS00215/USA300HOU_RS00220 | hypothetical protein/hypothetical protein |
? | USA300TCH1516_ALE | = 52988 | 99 (0.820) | intergenic (+598/‑75) | USA300HOU_RS00215/USA300HOU_RS00220 | hypothetical protein/hypothetical protein | |||||
Rejected: Coverage evenness skew score above cutoff. |
TGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGTTGCATAGAGAAAGTAAATATATAGAGTATAAGAAATCACGAAAAGGATTATCTAATGATATTTGG > USA300TCH1516_ALE/52849‑53128 | tGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATGATCGTAGTAATCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGCAATCATCGTAGTAATCGCGCGAAAATcg < 1:881736/141‑1 (MQ=17) tGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAAGCGCGTGAAATAATCAGAGGAATCGTTTGAAATCAACCTAGTAATCGCGCGAAAATcg < 1:328128/141‑1 (MQ=12) cGTAGTAATCGCGCGCAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATa > 1:1019534/1‑141 (MQ=17) cGTAGTAATCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATAGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAGATCATCGTAGTAATCGAGCGAAAATAGCGTGaaaga > 2:1206672/1‑139 (MQ=255) agtaCTCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATGGTACCAATCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTa > 1:933410/1‑141 (MQ=255) gtaATCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATAATAAGAGGAATCGTTTGAAAAAATCGTAGTAATCGCGCGAAAATGGCGTGAAgtagtaa > 2:1274505/1‑140 (MQ=11) aaTCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATgg < 1:1064131/141‑1 (MQ=14) aTCCCGCGAAAATCGCGTGAAATTATCAGAGGAAGTGTTTGAAATCGTCGTAGTAATCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGt < 1:1309033/141‑1 (MQ=11) cgcgcgAAAATCTCGTGAAATAACCAGAGGAATCGTCCGGCTCCATTGTACTAATCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAg < 2:1314136/141‑1 (MQ=11) gcgcgAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGa < 2:130749/141‑1 (MQ=40) gAAAAGCGCTTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGt < 1:619451/141‑1 (MQ=255) aaagcccgTGAAATAATCAGAGGAAGCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGttt < 1:1055891/135‑1 (MQ=255) aaaTCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGttt < 1:410715/141‑1 (MQ=255) aaaTCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGttt < 1:422783/141‑1 (MQ=255) aaaTCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGttt < 1:635509/141‑1 (MQ=255) aaaTCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGttt < 1:132513/141‑1 (MQ=255) tCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGGGCAATACTGTGGTAGACGGTTTGAg > 1:64917/1‑141 (MQ=255) gcgTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATcg < 1:971063/111‑1 (MQ=11) cgTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATAATCAGAGGCATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACGATGGTAGACGGTTTGAGTaa > 1:739606/1‑141 (MQ=255) tggaataacCATTGGACTCGTTAAAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAAt < 1:1020043/138‑1 (MQ=17) tGAAATAATCAGGGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAAt < 1:72667/141‑1 (MQ=255) aaaTAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTa < 1:230963/141‑1 (MQ=255) aaaTAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTa < 2:266139/141‑1 (MQ=255) aataatCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAAGACTGTGGGAGACGGTTTGAGTAAATTaa > 1:616149/1‑141 (MQ=255) ataatCTGAGGAATCGTTTGGAATCATCGGAGTAATCGCGCGAAAATCGTGTGAAATAATCAGAGGAATCGTTTGACATCATAGTAGTAATCGCGCGTAAATCGCGTGATATAGTATGTTAGACGGTTTTAGTAAATTAAt < 2:603222/141‑1 (MQ=14) aatCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATgg < 1:841612/141‑1 (MQ=255) aatCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATgg < 1:1366181/141‑1 (MQ=255) aatCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATgg < 1:233531/141‑1 (MQ=255) ggAATCGTTTGAAATCATCGTAGTAGTCGCGCGAAAATCGCGTGAAATAATCAGAGGGATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGGAATACGATGGTAGACGGGTTGGGTAAATTAGTGGAGGAttt > 1:50502/1‑141 (MQ=17) ggAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATAATCAGAGGACTCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTCGCCGGTTTGGGTAAATTAACGGAGTAttt > 1:736709/1‑141 (MQ=17) gTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAatat > 2:508196/1‑141 (MQ=255) tcatcGTAGTAATCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGtt < 1:986630/141‑1 (MQ=255) catcGTAGTAATCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGttt < 1:1332440/141‑1 (MQ=255) catcGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGttt < 2:852257/141‑1 (MQ=255) atcGTAGTAATCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTACTTTAATATTTATGGTTTg > 2:417682/1‑141 (MQ=255) atcGTAGTAATCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACGATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTg > 1:50654/1‑141 (MQ=255) cGTAGTAATCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGt < 1:120882/93‑1 (MQ=38) cGTAGTAATCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGt > 2:120882/1‑93 (MQ=38) gtagtaATCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTggag < 1:362616/141‑1 (MQ=255) gtagcaATCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTggag < 1:897194/141‑1 (MQ=255) agtcATCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATATTTTAGGCGTCCGTTTGAGTACATTAATTGAGGATTTTAATATTTATGGTTTggagga < 1:529817/141‑1 (MQ=17) gtcaTCGCGCGAACATCGCTTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGGAGACGGTTTAAGTAAATTAATGGAGTATTTTAATAGTTATGGTTTGGAGGaa < 2:154677/138‑1 (MQ=21) gtaATCGCGCGAAAATCGCGTGAAATAATCTGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGATTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGaa < 2:870831/141‑1 (MQ=255) cgAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGTTGc > 2:1103591/1‑141 (MQ=255) aTCGCGTGAAATAATCAGAGGAATCGTTTGAAAACATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGTTGCATaga < 1:1010200/141‑1 (MQ=255) tCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGTTGCATagag < 1:1133135/141‑1 (MQ=255) tCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGTTGCATagag < 1:508196/141‑1 (MQ=255) cggTGAAATAATCAGAAGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAAGATTTATGGTTTGGAGGAATTGCGTTGCATAGAGaa < 2:1053265/139‑1 (MQ=255) cggAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGTTGCATAGAGAAAg < 1:1274505/139‑1 (MQ=255) tGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGTTGCATAGAGAAAGt < 1:281650/141‑1 (MQ=255) ggAAAAAATCAGAAGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGTTGCATAGAGAAAGt < 1:368515/140‑1 (MQ=255) gAAATAATACGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAACTCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAAGATTTATGGTTTGGAGGAATTGCGTTGCATAGAGAAAGTa < 2:585254/141‑1 (MQ=255) aataatCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGTTGCATAGAGAAAGTaaa < 2:933410/141‑1 (MQ=255) ataatCAGAGGAATCGTTTGAAATCATCGTTGTAATGGCGCGATACGCGCTGGATATACAAGGGCAGACGGTATGAGTAAGGTAATGGAGTACGTTAATATTGNTGGTTTGGAGGAATTGCGTTGCATAGTGCAAGTaaac > 2:83444/1‑140 (MQ=19) ataatCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAGGCGCGTGAAATAGTCTGGTAGAAGGTATGAGTAAATGAATGGAGAATTTTAATATTTATGGTTTGGAGGAATTGCGTTGCATAGAGAAAGTaaaa > 2:341637/1‑140 (MQ=25) ataatCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGTTGCATAGAGAAAGTAAat > 2:826341/1‑141 (MQ=255) ataatCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGTTGCATAGAGAAAGTAAat > 2:1080332/1‑141 (MQ=255) ataatCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGTTGCATAGAGAAAGTAAat < 1:395277/141‑1 (MQ=255) aatCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGTTGCATAGAGAAAGTAAatat < 1:1307904/141‑1 (MQ=255) tCAGAGGAATCGTTTGGAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGTTGCATAGAGAAAGTAAatatat > 1:700581/1‑141 (MQ=255) tCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGTTGCATAGAGAAAGTAAatatat < 1:484669/141‑1 (MQ=255) tCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGTTGCATAGAGAAAGTAAaaatat > 1:469533/1‑141 (MQ=255) agagGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGTTGCATAGAGAAAGTAAATATATag < 1:649841/141‑1 (MQ=255) agagGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGTTGCATAGAGAAAGTAAATATATag < 1:295687/141‑1 (MQ=255) agagGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGTTGCATAGAGAAAGTAAATATATag < 1:907808/141‑1 (MQ=255) agGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGTTGCATAGAGAAAGTAAATATATagag < 1:557014/141‑1 (MQ=255) agGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGTTGCATAGAGAAAGTAAATATATagag < 1:1266985/141‑1 (MQ=255) aaTCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGTTGCATAGAGAAAGTAAATATATAGAGtat < 1:1103591/141‑1 (MQ=255) aTCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGTTGCATAGAGAAAGTAAATATATAGAGtata > 1:763095/1‑141 (MQ=255) tCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGTTGCATAGAGAAAGTAAATATATAGAGTATaa > 2:219837/1‑141 (MQ=255) tCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGTTGCATAGAGAAAGTAAATATATAGAGTATaa > 2:1100125/1‑141 (MQ=255) tCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAAGTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGTTGCATAGAGAAAGTAAATATATAGAGGATaa > 2:342466/1‑141 (MQ=255) gTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGTTGCATAGAGAAAGTAAATATATAGAGTATAAGa < 1:225114/141‑1 (MQ=255) gTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGTTGCATAGAGAAAGTAAATATATAGAGTATAAGa < 1:81849/141‑1 (MQ=255) gAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTACACGGTTTGAGTAAATTAATGGAGTATTTTAATATATCTGGTTTGGAGGAATTGCGTTGCATTGAGAAAGTAAATATATAGAGTATAAGaaagc > 2:891639/1‑139 (MQ=255) tcatcGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGTTGCATAGAGAAAGTAAATATATAGAGTATAAGAAATCACGa < 1:1247905/141‑1 (MQ=255) tcatcGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGTTGCATAGAGAAAGTAAATATATAGAGTATAAGAAATCACGa < 2:572814/141‑1 (MQ=255) tcatcGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGTTGCATAGAGAAAGTAAATATATAGAGTATAAGAAATCACGa < 1:916393/141‑1 (MQ=255) tcatcGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGTTGCATAGAGAAAGTAAATAGATAGCGTATAAGAAATCACGa < 1:698622/141‑1 (MQ=255) atcGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGTTGCATAGAGAAAGTAAATATATAGAGTATAAGAAATCACGaaa > 2:429379/1‑141 (MQ=255) atcGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTCGGAGGAATTGCGTTGCATAGAGAAAGTAAATATATAGAGTATAAGAAATCACGaaa > 2:1201276/1‑141 (MQ=255) tcGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGTTGCATAGAGAAAGTAAATATATAGAGTATAAGAAATCACGaaaa < 2:985442/141‑1 (MQ=255) tcGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGTTGCATAGAGAAAGTAAATATATAGAGTATAAGAAATCACGaaaa < 2:438222/141‑1 (MQ=255) tcGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGTTGCATAGAGAAAGTAAATATATAGAGTATAAGAAATCACGaaaa < 2:375923/141‑1 (MQ=255) gtagtaATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTTCGTTGCATAGAGAAAGTAAATATATAGAGTAGAAGAAATCAAGAAAAgg > 1:852745/1‑141 (MQ=255) gcgcgAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGTTGCATAGAGAAAGTAAATATATAGAGTAGAAGAAATCACGAAAAGGATTATCTaa > 2:1076102/1‑141 (MQ=255) gAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGTTGCATAGAGAAAGTAAATATATAGAGTATAAGAAATCACGAAAAGGATTATCTAATGat < 2:562866/141‑1 (MQ=255) aaaaTCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGTTGCATAGAGAAAGTAAATATATAGAGTATACGAAATCCCGACCAGGATTATCTAATGata < 2:1361081/141‑1 (MQ=255) aaaaTCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGTTGCATAGAGAAAGTAAATATATAGAGTATAAGAAATCACGAAAAGGATTATCTAATGata > 1:1339228/1‑141 (MQ=255) aaaaTCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGTTGCATAGAGAAAGTAAATATATAGAGTATAAGAAATCACGAAAAGGATTATCTAATGata > 2:87850/1‑141 (MQ=255) aaaaTCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGTTGCATAGAGAAAGTAAATATATAGAGTATAAGAAATCACGAAAAGGATTATCTAATGata > 1:979378/1‑141 (MQ=255) aaTCGCGTTAAATACTATGGTATACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGTTGCATAGAGAAAGTAAATATATATAGTATAAGAAATCACGAAAAGGATTATCTAATTATAtt < 2:579346/141‑1 (MQ=255) aaTCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGTTGCATAGAGAAAGTAAATATATAGAGTATAAGAAATCACGAAAAGGATTATCTAATGATAtt < 2:315993/141‑1 (MQ=255) aaTCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGTTGCATAGAGAAAGTAAATATATAGAGTATAAGAAATCACGAAAAGGATTATCTAATGATAtt < 2:914553/141‑1 (MQ=255) aTCGCGTGAAATACTATGGGAGACGGTTTGAGTAAATTAATGGGGTATTGTAATATTTATGGTTTGGAGGAATTGCGTTGCATAGAGAAAGTAAATATATAGTGTTTTAGAAAGCACGAAAAGGATTATCTAATGATAttt < 2:352508/141‑1 (MQ=255) tCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGTTGCATAGAGAAAGTAAATATATAGAGTATAAGAAATCACGAAAAGGATTATCTAATGATATTTg > 2:835957/1‑141 (MQ=255) tCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTCTAATATTTATGGTGTGGAGGAATTGCGTTGTAAACAGAAAGGTAATAAATAGATTATAAGAAATCACGAAAAGGATTATCTAATGATATTTg > 2:1317621/1‑141 (MQ=255) cgcgTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGTTGCATAGAGAAAGTAAATATATAGAGTATAAGAAATCACGAAAAGGATTATCTAATGGTATTTgg > 1:246440/1‑141 (MQ=255) cgcgTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGTTGCATAGAGAAAGTAAATATATAGAGTATAAGAAATAACGAAAAGGATTATATAATGATATTTgg > 1:626591/1‑141 (MQ=255) | TGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGTTGCATAGAGAAAGTAAATATATAGAGTATAAGAAATCACGAAAAGGATTATCTAATGATATTTGG > USA300TCH1516_ALE/52849‑53128 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |