BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	USA300TCH1516_ALE	34173 =	131 (0.940)	12 (0.090)	12/246	NT	8.0%	coding (462/480 nt)	rlmH	Ribosomal RNA large subunit methyltransferase H
*	?	USA300TCH1516_ALE	= 57858	151 (1.130)	12 (0.090)	12/246	NT	8.0%	intergenic (+304/+613)	USA300HOU_RS00240/USA300TCH1516_00049	hypothetical protein/hypothetical protein

Only 100 of 184 total aligned reads displayed.

ACTGTATTAGTTTAATCAGAAGACGTGTCTACTTTGTAAGCTTCTAAGAACTTATTATATGATATAGCGTTTGAGTTTTGTTGTTCTTCTATAAATTTCTGTAGTTATTTTTC‑AAAAACCGCATCATTAACTGATAAGCAGAAGCGTATCACAAATAAAACTAAAAAATAGATTGTGTATAATATAAAAGGAAGGGATTTATATTAAAATTTTGAATTCAAAAATTATTGAAAGGGAAGCTACCTTAGAAATTGAATCTATGGCCACTAACTGCTTTTT  >  USA300TCH1516_ALE/57720‑57998

aCTGTATTAGTTTAATCAGAAGACGTGTCTACTTTGTAAGCTTCTAAGAACTTATTATATGATATAGCGTTTGAGTTTTGTTGTTCTTCTATAAATTGCTGTAGTTATTTTTC‑AAAAACCGCATCATTAACTGATAAGCag                                                                                                                                            >  3:102863‑M2/1‑139 (MQ=255)

  tGTATTAGTTTAATCAGAAGACGTGTCTACTTTGTAAGCTTCTAAGAACTTATTATATGATATAGCGTTTGAGTTTTGTTGTTCTTCTATAAATTTCTGTAGTTATTTTTC‑AAAAACCGCATCATTAACTGATAAGCagaa                                                                                                                                          <  1:1112701‑M2/141‑5 (MQ=255)

    tATTAGTTTAATCAGAAGACGTGTCCACTATGTAAGCTTCTAAGAACTTATTATATGATATAGCGGTTGAGTTTTGTTGTTCTTCTATAAATTTCTGTAGTTATTTTTC‑ATAAACAGCATTATTAACTGATAAGCagaagc                                                                                                                                        <  2:1129778‑M2/141‑7 (MQ=255)

     aTTAGTTTAATCAGAAGACGTGTCTACTTTGTAAGCTTCTAAGAACTTATTATATGATATAGCGTTTGAGTTTTGTTGTTCTTCTATAAATTTCTGTAGTTATTTTTC‑AAAAACCGCATCATTAACTGATAAGCAGAAGCg                                                                                                                                       <  4:403534/141‑1 (MQ=255)

        aGTTTAATCAGAAGACGTGTCTACTTTGTAAGCTTCTAAGAACTTATTATATGATATAGCGTTTGAGTTTTGTTGTTCTTCTATAAATTTCTGTAGTTATTTTTC‑AAAAACCGCATCATTAACTGATAAGCagaagcatat                                                                                                                                    >  3:480560‑M2/1‑131 (MQ=255)

        aGTTTAATCAGAAGACGTGTCTACTTTGTAAGCTTCTAAGAACTTATTATATGATATAGCGTTTGAGTTTTGTTGTTCTTCTATAAATTTCTGTAGTTATTTTTC‑AAAAACCGCATCATTAACTGATAAGCAGAAGCGTAt                                                                                                                                    <  2:838605/141‑1 (MQ=255)

        aGTTTAATCAGAAGACGTGTCTACTTTGTAAGCTTCTAAGAACTTATTATATGATATAGCGTTTGAGTTTTGTTGTTCTTCTATAAATTTCTGTAGTTATTTTTC‑AAAAACCGCATCATTAACTGATAAGCAGAAGCGTAt                                                                                                                                    <  3:161704/141‑1 (MQ=255)

        aGTTTAATCAGAAGACGTGTCTACTTTGTAAGCTTCTAAGAACTTATTATATGATATAGCGTTTGAGTTTTGTTGTTCTTCTATAAATTTCTGTAGTTATTTTTC‑AAAAACCGCATCATTAACTGATAAGCAGAAGCGTAt                                                                                                                                    >  3:359154/1‑141 (MQ=255)

         gTTTAATCAGAAGACGTGTCTACTTTGTAAGCTTCTAAGAACTTATTATATGATATAGCGTTTGAGTTTTGTTGTTCTTCTATAAATTTCTGTAGTTATTTTTC‑AAAAACCGCATCATTAACTGATAAGCAGAAGCGTATc                                                                                                                                   <  2:164754/141‑1 (MQ=255)

          tttAATCAGAAGACGTGTCTACTTTGTAAGCTTCTAAGAACTTATTATATGATATAGCGTTTGAGTTTTGTTGTTCTTCTATAAATTTCTGTAGTTATTTTTC‑AAAAACCGCATCATTAACTGATAAGCAGAAGCGTATca                                                                                                                                  <  3:325108/141‑1 (MQ=255)

             aaTCAGAAGACGTGTCTACTTTGTAAGCTTCTAAGAACTTATTATATGATATAGCGTTTGAGTTTTGTTGTTCTTCTATAAATTTCTGTAGTTATTTTTCAAAAAACCGCATCATTAACTGATAAGCAGAAGCGTATcaca                                                                                                                                >  4:136736/1‑141 (MQ=255)

             aaTCAGAAGACGTGTCTACTTTGTAAGCTTCTAAGAACTTATTATATGATATAGCGTTTGAGTTTTGTTGTTCTTCTATAAATTTCTGTAGTTATTTTTC‑AAAAACCGCATCATTAACTGATAAGCagaagcatatcataa                                                                                                                               >  1:724‑M2/1‑126 (MQ=255)

             aaTCAGAAGACGTGTCTACTTTGTAAGCTTCTAAGAACTTATTATATGATATAGCGTTTGAGTTTTGTTGTTCTTCTATAAATTTCTGTAGTTATTTTTC‑AAAAACCGCATCATTAACTGATAAGCAGAAGCGTATCACaa                                                                                                                               >  2:1015001/1‑141 (MQ=255)

             aaTCAGAAGACGTGTCTACTTTGTAAGCTTCTAAGAACTTATTATATGATATAGCGTTTGAGTTTTGTTGTTCTTCTATAAATTTCTGTAGTTATTTTTC‑AAAAACCGCATCATTAACTGATAAGCAGAAGCGTATCACaa                                                                                                                               >  2:1085518/1‑141 (MQ=255)

             aaTCAGAAGACGTGTCTACTTTGTAAGCTTCTAAGAACTTATTATATGATATAGCGTTTGAGTTTTGTTGTTCTTCTATAAATTTCTGTAGTTATTTTTC‑AAAAACCGCATCATTAACTGATAAGCAGAAGCGTATCACaa                                                                                                                               >  1:56196/1‑141 (MQ=255)

             aaTCAGAAGACGTGTCTACTTTGTAAGCTTCTAAGAACTTATTATATGATATAGCGTTTGAGTTTTGTTGTTCTTCTATAAATTTCTGTAGTTATTTTTC‑AAAAACCGCATCATTAACTGATAAGCAGAAGCGTATCACaa                                                                                                                               >  2:452316/1‑141 (MQ=255)

             aaTCAGAAGACGTGTCTACTTTGTAAGCTTCTAAGAACTTATTATATGATATAGCGTTTGAGTTGTGTTGTGCGGCTATAAATTTCTGTAGTTATTTTTC‑AAAAACCGCATCATTAACTGATAAGCAGAAGCGTATCACaa                                                                                                                               >  1:415561/1‑141 (MQ=255)

                   aagaCGTGTCTACTTTGTAAGCTTCTAAGAACTTATTATATGATATAGCGTTTGAGTTTTGTTGTTCTTCTATAAATTTCTGTAGTTATTTTTC‑AAAAACCGCATCATTAACTGATAAGCAGAAGCGTATCACAAATaaaa                                                                                                                         >  3:451600/1‑141 (MQ=255)

                    agaCGTGTCTACTTTGTAAGCTTCTAAGAACTTATTATATGATATAGCGTTTGAGTTTTGTTGTCCTTCTATAAATTTCTGTAGTTATTTTTC‑AAAAACCGCATCATTAACTGATAAGCAGAAGCGTATCACAAATAAAAc                                                                                                                        <  2:111893/141‑1 (MQ=255)

                       cgtgggtACTTTGTAAGCGGCTAAGAACTTATTATATGATATAGCGTTTGAGTTTTGTTGTTCTTCTATAAATTTCTGTAGTTATTTTTC‑AAAAACCGCATCATTAACTGATAAGCAGAAGCGTATCACAAATAGAACTaa                                                                                                                     >  4:240676/7‑141 (MQ=255)

                       cGTGTCTACTTTGTAAGCTTCTAAGAACTTATTATATGATATAGCGTTTGAGTTTTGTTGTTCTTCTATAAATTTCTGTAGTTATTTTTC‑AAAAACCGCATCATTAACTGATAAGCAGAAGCGTATCACAAATAAAACTaa                                                                                                                     >  1:96459/1‑141 (MQ=255)

                       aatgtCTACTTTTTAAGCTTCTAAGAACTTATTATATGATATATCGTTTGAGTTTTGTTGTTCATCTATAAATTTCTGTAGTTATTTTTC‑AAAAAACGCATCATTAACTGATAAGCAGAAGCTTATAAAAAATAAAACTaa                                                                                                                     <  2:1192358/139‑1 (MQ=255)

                        gtgtCTACTTTGTAAGCTTCTAAGAACTTATTATATGATATAGCGTTTGAGTTTTGTTGTTCTTCTATAAATTTCTGTAGTTATTTTTC‑AAAAACCGCATCATTAACTGATAAGCAGAAGCGTATCACAAATAAAACTaca                                                                                                                    >  4:422905/1‑139 (MQ=255)

                        gtgtCTACTTTGTAAGCTTCTAAGAACTTATTATATGATATAGCGTTTGAGTTTTGTTGTTCTTCTATAAATTTCTGTAGTTATTTTTA‑AAAAACCGCATCATTAACTGATAAGCAGAAGCGTATCACAAATAAAACTaaa                                                                                                                    <  2:690333/141‑1 (MQ=255)

                          gtCTACTTTGTAAGCTTCTAAGAACTTATTATATGATATAGCGTTTGAGTTTTGTTGTTCTTCTATAAATTTCTGTAGTTATTTTTC‑AAAAACCGCATCATTAACTGATAAGCAGAAGCGTATCACAAATAAAACTaaaaa                                                                                                                  <  2:153259/141‑1 (MQ=255)

                          gtCTACTTTGTAAGCTTCTAAGAACTTATTATATGATATAGCGTTTGAGTTTTGTTGTTCTTCTATAAATTTCTGTAGTTATTTTTC‑AAAAACCGCATCATTAACTGATAAGCAGAAGCGTATCACAAATAAAACTaaaaa                                                                                                                  <  1:556367/141‑1 (MQ=255)

                           tCTACTTTGTAAGCTTCTCAGAACTTATTATATGATATAGCGTTTGAGTTTTGTTGTTCTTCTATAAATTTCTGTAGTTATTTTTC‑AAAAACCGCATCATTAACTGATAAGCAGAAGCGTATCACAAATAAAACTaaaaaa                                                                                                                 >  2:1193072/1‑141 (MQ=255)

                           tCTACTTTGTAAGCTTCTAAGAACTTATTATATGATATAGCGTTTGAGTTTTGTTGTTCTTCTATAAATTTCTGTAGTTATTTTTC‑AAAAACCGCATCATTAACTGATAAGCAGAAGCGTATCACAAATAAAACTaaaaaa                                                                                                                 >  1:465307/1‑141 (MQ=255)

                           tCTACTTTGTAAGCTTCTAAGAACTTATTATATAATATAGCCTTTGATTTTTTTTGTTCTTCTATAAATTTCTGAAAAAAAAAAAA‑AAAAACCGCATCATTAACTGATAAGCAGAAGCGTATCACAAATAAAACTaaaaaa                                                                                                                 <  2:1147422/141‑1 (MQ=25)

                            cTACTTTGTAAGCTTCTAAGAACTTATTATATGATATAGCGTTTGAGTTTTGTTGTTCTTCTATAAATTTCTGTAGTTATTTTTC‑AAAAACCGCATCATTAACTGATAAGCAGAAGCGTATCACAAATAAAACTAAAAAAt                                                                                                                >  4:144214/1‑141 (MQ=255)

                                tttGTAAGCTTCTAAGAACTTATTATATGATATAGCGTTTGAGTTTTGTTGTTCTTCTATAAATTTCTGTAGTTATTTTTC‑AAAAACCGCATCATTAACTGATAAGCAGAAGCGTATCACAAATAAAACTAAAAAATAGAt                                                                                                            <  4:10559/141‑1 (MQ=255)

                                tttGTAAGCTTCTAAGAACTTATTATATGATATAGCGTTTGAGTTTTGTTGTTCTTCTATAAATTTCTGTAGTTATTTTTC‑AAAAACCGCATCATTAACTGATAAGCAGAAGCGTATCACAAATAAAACTAAAAAATAGAt                                                                                                            <  1:181223/141‑1 (MQ=255)

                                   gTAAGCTTCTAAGAACTTATTATATGATATAGCGTTTGAGTTTTGTTGTTCTTCTATAAATTTCTGTAGTTATTTTTC‑AAAAACCGCATCATTAACTGATAAGCAGAAGCGTATCACAAATAAAACTAAAAAATAGATtgt                                                                                                         >  1:88281/1‑141 (MQ=255)

                                   gTAAGCTTCTAAGAACTTATTATATGATATAGCGTTTGAGTTTTGTTGTTCTTCTATAAATTTCTGTAGTTATTTTTC‑AAAAACCGCATCATTAACTGATAAGCAGAAGCGTATCACAAATAAAACTAAAAAATAGATtgt                                                                                                         >  2:614622/1‑141 (MQ=255)

                                   gTAAGCTTCTAAGAACTTATTATATGATATAGCGTTTGAGTTTTGTTGTTCTTCTATAAATTTCTGTAGTTATTTTTC‑AAAAACCGCATCATTAACTGATAAGCAGAAGCGTATCACAAATAAAACTAAAAAATAGATtgt                                                                                                         >  3:99238/1‑141 (MQ=255)

                                    tAAGCTTCTAAGAACTTATTATATGATATAGCGTTTGAGTTTTGTTGTTCTTCTATAAATTTCTGTAGTTATTTTTC‑AAAAACCGCATCATTAACTGATAAGCAGAAGCGTATCACAAATAAAACTAAAAAATAGATtgtg                                                                                                        >  2:477576/1‑141 (MQ=255)

                                      aGCTTCTAAGAACTTATTATATGATATAGCGTTTGAGTTTTGTTGTTCTTCTATAAATTTCTGTAGTTATTTTTC‑AAAAACCGCATCATTAACTGATAAGCAGAAGCGTATCACAAATAAAACTAAAAAATAGATTGTGta                                                                                                      >  4:161351/1‑141 (MQ=255)

                                      aGCTTCTAAGAACTTATTATATGATATAGCGTTTGAGTTTTGTTGTTCTTCTATAAATTTCTGTAGTTATTTTTC‑AAAAACCGCATCATTAACTGATAAGCAGAAGCGTATCACAAATAAAACTAAAAAATAGATTGTGta                                                                                                      >  4:66308/1‑141 (MQ=255)

                                       gCTTCTAAGAACTTATTATATGATATAGCGTTTGAGTTTTGTTGTTCTTCTATAAATTTCTGTAGTTATTTTTC‑AAAAACCGCATCATTAACTGATAAGCagaagcataacataattgaagcgtttttttcagccgcttca                                                                                                     >  2:600570‑M2/1‑100 (MQ=255)

                                       gCTTCTAAGAACTTATTATATGATATAGCGTTTGAGTTTTGTTGTTCTTCTATAAATTTCTGTAGTTATTTTTC‑AAAAACCGCATCATTAACTGATAAGCAGAAGCGTATCACAAATAAAACTAAAAAATAGATTGTGtat                                                                                                     <  2:729508/141‑1 (MQ=255)

                                       gCTTCTAAGAACTTATTATATGATATAGCGTTTGAGTTTTGTTGTTCTTCTATAAATTTCTGTAGTTATTTTTC‑AAAAACCGCATCATTAACTGATAAGCAGAAGCGTATCACAAATAAAACTAAAAAATAGATTGTGtat                                                                                                     <  1:363070/141‑1 (MQ=255)

                                       gCTTCTAAGAACTTATTATATGATATAGCGTTTGAGTTTTGTTGTTCTTCTATAAATTTCTGTAGTTATTTTTC‑AAAAACCGCATCATTAACTGATAAGCAGAAGCGTATCACAAATAAAACTAAAAAATAGATTGTGtat                                                                                                     <  4:327138/141‑1 (MQ=255)

                                         ttCTAAGAACTTATTATATGATATAGCGTTTGAGTTTTGTTGTTCTTCTATAAATTTCTGTAGTTATTTTTT‑TTTTTTTTCATCATTAACTGATAAGCAGAAGCGTATCACAAATAAAACTAAAAAATAGATTGTGtataa                                                                                                   >  2:76802/1‑141 (MQ=255)

                                           cTAATAACTTATTATATGATATAGCTTTTGAGTTTTGTTTTTCTTCTATAAATTTCTGTAGTTATTTTTC‑AAAAACCGCATCATTAACTGATAAGCAGAAGCGTATCACAAATAAAACTAAAAAATAGATTGTGtataata                                                                                                 <  2:906519/141‑1 (MQ=255)

                                           cTAAGAACTTATTATATGATATAGCGTTTGAGTTTTGTTGTTCTTCTATAAATTTCTGTAGTTATTTTTC‑AAAAACCGCATCATTAACTGATAAGCAGAAGCGTATCACAAATAAAACTAAAAAATAGATTGTGtataata                                                                                                 >  1:441177/1‑141 (MQ=255)

                                              aGAACTTATTATATGATATAGCGTTTGAGTTTTGTTGTTCTTCTATAAATTTCTGTAGTTATTTTTC‑AAAAACCGCATCATTAACTGATAAGCAGAAGCGTATCACAAATAAAACTAAAAAATAGATTGTGtataatataa                                                                                              >  2:726539/1‑141 (MQ=255)

                                                aaCTTATTATATGATATAGCGTTTGAGTTTTGTTGTTCTTCTATAAATTTCTGTAGTTATTTTTC‑AAAAACCGCATCATTAACTGATAAGCAGAAGCGTATCACAAATAAAACTAAAAAATAGATTGTGTATAATATaaaa                                                                                            <  1:1149947/141‑1 (MQ=255)

                                                 aCTTATTATATGATATAGCGTTTGAGTTTTGTTGTTCTTCTATAAATTTCTGTAGTTATTTTTC‑AAAAACCGCATCATTAACTGATAAGCAGAAGCGTATCACAAATAAAACTAAAAAATAGATTGTGTATAATATAAaag                                                                                           >  3:408792/1‑141 (MQ=255)

                                                   ttattaTATGATATAGCGTTTGAGTTTTGTTGTTCTTCTATAAATTTCTGTAGTTATTTTTC‑AAAAACCGCATCATTAACTGATAAGCAGAAGCGTATCACAAATAAAACTAAAAAATAGATTGTGTATAATATAAaagga                                                                                         >  1:647337/1‑141 (MQ=255)

                                                    tattatATGATATAGCGTTTGAGTTTTGTTGTTCTTCTATAAATTTCTGTAGTTATTTTTC‑AAAAACCGCATCATTAACTGATAAGCAGAAGCGTATCACAAATAAAACTAAAAAATAGATTGTGTATAATATAAaaggaa                                                                                        <  1:549534/141‑1 (MQ=255)

                                                      ttatATGATATAGCGTTTGAGTTTTGTTGTTATTCTATAAATTTCTGTAGTTATTTTTC‑AAAAACCGCATCATTAACTGATAAGCAGAAGCGTATCACAAATAAAACTAAAAAATAGATTGTGTATAATATAAaaggaagg                                                                                      <  1:747587/141‑1 (MQ=255)

                                                       tataTGATATAGCGTTTGAGTTTTGTTGTTCTTCTATAAATTTCTGTAGTTATTTTTT‑TTTTTTTTTATCATTAACTGATAAGCACAAGATTATCACAAATAAAACTAAAAAATAGATTGTGTATAATATAAaaggaaggt                                                                                     >  2:958595/1‑140 (MQ=255)

                                                         tatGATATAGCGTTTGAGTTTTGTTGTTCTTCTATAAATTTCTGTAGTTATTTTTC‑AAAAACCGCATCATTAACTGATAAGCAGAAGCGTATCACAAATAAAACTAAAAAATAGATTGTGTATAATATAAAAGGAAGGGAt                                                                                   >  1:58789/1‑141 (MQ=255)

                                                            gATATAGCGTTTGAGTTTTGTTGTTCTTCTATAAATTTCTGTAGTTATTTTTC‑AAAAACCGCATCATTAACTGATAAGCAGAAGCGTATCACAAATAAAACTAAAAACTAGATTGTGTATAATATAAAAGGAAGGGATTta                                                                                >  2:65373/1‑141 (MQ=255)

                                                            gATATAGCGTTTGAGTTTTGTTGTTCTTCTATAAATTTCTGTAGTTATTTTTC‑AAAAACCGCATCATTAACTGATAAGCAGAAGCGTATCACAAATAAAACTAAAAAATAGATTGTGTATAATATAAAAGGAAGGGATTta                                                                                >  3:173862/1‑141 (MQ=255)

                                                             atatAGCGTTTGAGTTTTGTTGTTCTTCTATAAATTTCTGTAGTTATTTTTC‑AAAAACCGCATCATTAACTGATAAGCAGAAGCGTATCACAAATAAAACTAAAAAATAGATTGTGTATAATATAAAAGGAAGGGATTtat                                                                               >  1:956312/1‑141 (MQ=255)

                                                               ataGCGTTTGAGTTTTGTTGTTCTTCTATAAATTTCTGTAGTTATTTTTC‑AAAAACCGCATCATTAACTGATAAGCAGAAGCGTATCACAAATAAAACTAAAAAATAGATTGTGTATAATATAAAAGGAAGGGATTTatat                                                                             <  2:778037/141‑1 (MQ=255)

                                                                 aGCGTTTGAGTTTTGTTGTTCTTCTATAAATTTCTGTATTTATTTTTC‑AAAAACCGCATCATTAACTGATAAGCAGAAGCGTATCACAAATAAAACTAAAAAATAGATTGTGTATAATATAAAAGGAAGGGATTTATATTa                                                                           <  1:125757/141‑1 (MQ=255)

                                                                  gCGTTTGAGTTTTGTTGTTCTTCTATAAATTTCTGTAGTTATTTTTC‑AAAAACCGCATCATTAACTGATAAGCAGAAGCGTATCACAAATAAAACTAAAAAATAGATTGTGTATAATATAAAAGGAAGGGATTTATATTaa                                                                          >  2:332117/1‑141 (MQ=255)

                                                                  gCGTTTGAGTTTTGTTGTTCTTCTATAAATTTCTGTAGTTATTTTTC‑AAAAACCGCATCATTAACTGATAAGCAGAAGCGTATCACAAATAAAACTAAAAAATAGATTGTGTATAATATAAAAGGAAGGGATTTATATTaa                                                                          >  1:227751/1‑141 (MQ=255)

                                                                   cGTTTGAGTTTTGTTGTTCTTCTATAAATTTCTGTAGTTATTTTTC‑AAAAACCGCATCATTAACTGATAAGCAGAAGCGTATCACAAATAAAACTAAAAAATAGATTGTGTATAATATAAAAGGAAGGGATTTATATTaaa                                                                         >  2:582604/1‑141 (MQ=255)

                                                                     tttGAGTTTTGTTGTTCTTCTATAAATTTCTGTAGTTATTTTTC‑AAAAACCGCATCATTAACTGATAAGCAGAAGCGTATCACAAATAAAACTAAAAAATAGATTGTGTATAATATAAAAGGAAGGGATTTATATTAAAAt                                                                       >  1:790914/1‑141 (MQ=255)

                                                                     tttGAGTTTTGTTGTTCTTCTATAAATTTCTGTAGTTATTTTTC‑AAAAACCGCATCATTAACTGATAAGCAGAAGCGTATCACAAATAAAACTAAAAAATAGATTGTGTATAATATAAAAGGAAGGGATTTATATTAAAAt                                                                       >  3:404000/1‑141 (MQ=255)

                                                                       tGAGTTTTGTTGTTCTTCTATAAATTTCTGTAGTTATTTTTT‑TTTTTTTTTATCATTAACTGATAAGCAGAAGCGTATCACAAATAAAACTAAAAAATAGATTGTGTATAATATAAAAGGAAGGGATTTATATTAAAAttt                                                                     >  2:584936/1‑141 (MQ=255)

                                                                       tGAGTTTTGTTGTTCTTCTATAAATTTCTGTAGTTATTTTTG‑CAAAAGTGCATCATTAAATGATAAGCAGAAGAGTATCACAAATAAAACTAAAAAATAGATTGTGTATAATATAAAAGCAAGGAATTTATATTAAAAttt                                                                     >  4:295056/1‑141 (MQ=255)

                                                                          gTTTTGTTGTTCTTCTATAAATTTCTGTAGTTATTTTTC‑AAAAACCGCATAATTAAAAAATAAAAAGAAGCGTAGGACAAATAAAGCTAAAAAATAGATTGTGTATAATATAAAAGGAAGGGATTTCTATTaaaaaaaaaa                                                                  <  2:842732/141‑7 (MQ=255)

                                                                            tttGTTGTTCTTCTATAAATTTCTGTAGTTATTTTTC‑AAAAACCGCATCATTAACTGATAAGCAGAAGCGTATCACAAATAAAACTAAAAAATAGATTGTGTATAATATAAAAGGAAGGGATTTATATTAAAATTTTGAAt                                                                <  1:688300/141‑1 (MQ=255)

                                                                             ttgttgTTCTTCTATAAATTTCTGTAGTTATTTTTC‑AAAAACCGCATCATTAACTGATAAGCAGAAGCGTATCACAAATAAAACTAAAAAATAGATTGTGTATAATATAAAAGGAAGGGATTTATATTAAAATTTTGAAtt                                                               <  1:1063596/141‑1 (MQ=255)

                                                                              tgttgtTCTTCTATAAATTTCTGTAGTTATTTTTC‑AAAAACCGCATCATTAACTGATAAGCAGAAGCGTATCACAAATAAAACTAAAAAATAGATTGTGTATAATATAAAAGGAAGGGATTTATATTAAAATTTTGAATTc                                                              >  2:1077628/1‑141 (MQ=255)

                                                                                 tgttCTTCTATAAATTTCTGTAGTTATTTTTC‑AAAAACCGCATCATTAACTGATAAGCAGAAGCGTATCACAAATAAAACTAAAAAATAGATTGTGTATAATATAAAAGGAAGGGATTTATATTAAAATTTTGAATTCaaa                                                           >  2:538385/1‑141 (MQ=255)

                                                                                    tcttctATAAATTTCTGTAGTTATTTTTC‑AAAAACCGCATCATTAACTGATAAGCagaagcatatcataaatgatgcggttttttcagccgcttcataaagggattttgaatgtatcagaacatatgaggtttatgtgaat                                                        <  1:1004734‑M2/141‑87 (MQ=255)

                                                                                    tcttctATAAATTTCTGTAGTTATTTTTC‑AAAAACCGCATCATTAACTGATAAGCAGAAGCGTATCACAAATAAAACTAAAAAATAGATTGTGTATAATATAAAAGGAAGGGATTTATATTAAAATTTTGAATTCAAAAat                                                        >  4:96431/1‑141 (MQ=255)

                                                                                    tcttctATAAATTTCTGTAGTTATTTTTC‑AAAAACCGCATCATTAACTGATAAGCAGAAGCGGATCACAAATAAAACTAAAAAATAGATTGTGTATAATATAAAAGGAAGGGATTTATATTAAAATTTTGAATTCAAAAat                                                        >  2:389126/1‑141 (MQ=255)

                                                                                     cttctATAAATTTCTGTAGTTATTTTTC‑AAAAACCGCATCATTAACTGATAAGCAGAAGCGTATCACAAATAAAACTAAAAAATAGATTGTGTATAATATAAAAGGAAGGGATTTATATTAAAATTTTGAATTCAAAAatt                                                       >  2:1044001/1‑141 (MQ=255)

                                                                                           taAATTTCTGTAGTTATTTTTC‑AAAAACCGCATCATTAACTGATAAGCAGAAGCGTATCACAAATAAAACTAAAAAATAGATTGTGTATAATATAAAAGGAAGGGATTTATATTAAAATTTTGAATTCAAAAATTATTGaa                                                 >  2:798363/1‑141 (MQ=255)

                                                                                           taAATTTCTGTAGTTATTTTTC‑AAAAACCGCATCATTAACTGATAAGCAGAAGCGTATCACAAATAAAACTAAAAAATAGATTGTGTATAATATAAAAGGAAGGGATTTATATTAAAATTTTGAATTCAAAAATTATTGaa                                                 >  3:277275/1‑141 (MQ=255)

                                                                                               tttCTGTAGTTATTTTTC‑AAAAACCGCATCATTAACTGATAAGCAGAAGCGTATCACAAATAAAACTAAAAAATAGATTGTGTATAATATAAAAGGAAGGGATTTATATTAAAATTTTGAATTCAAAAATTATTGAAAggg                                             >  2:359282/1‑141 (MQ=255)

                                                                                                 tCTGTAGTTATTTTTC‑AAAAACCGCATCATTAACTGATAAGCAGAAGCGTATCACAAATAAAACTAAAAAATAGATTGTGTATAATATAAAAGGAAGGAATTTATATTAAAATTTTGAATTCAAAAATTATTGAAAGGGaa                                           <  1:1023773/141‑1 (MQ=255)

                                                                                                       gTTATTTTTC‑AAAAACCGCATCATTAACTGATAAGCAGAAGCGTATCACAAATAAAACTAAAAAATAGATTGTGTATAATATAAAAGGAAGGGATTTATATTAAAATTTTGAATTCAAAAATTATTGAAAGGGAAGCTAcc                                     <  2:385472/141‑1 (MQ=255)

                                                                                                       gTTATTTTTC‑AAAAACCGCATCATTAACTGATAAGCAGAAGCGTATCACAAATAAAACTAAAAAATAGATTGTGTATAATATAAAAGGAAGGGATTTATATTAAAATTTTGAATTCAAAAATTATTGAAAGGGAAGCTAcc                                     <  1:482675/141‑1 (MQ=255)

                                                                                                          aTTTTTC‑AAAAACTGCATCATTAACTGATAAGCAGAAGCGTATCACAAATAAAACTAAAAAATAGATTGTGTATAATATAAAAGGAAGGGATTTATATTAAAATTTTGAATTCAAAAATTATTGAAAGGGAAGCTACCTTa                                  >  4:178915/1‑141 (MQ=255)

                                                                                                               tC‑AAAAACCGCATCATTAACTGATAAGCAGAAGCGTATCACAAATAAAACTAAAAAATAGATTGTGTATAATATAAAAGGAAGGGATTTATATTAAAATTTTGAATTCAAAAATTATTGAAAGGGAAGCTACCTTAGAAAt                             <  1:53468/141‑1 (MQ=255)

                                                                                                                  aaaaaCCGCATCATTAACTGATAAGCAGAAGCGTATCACAAATAAAACTAAAAAATAGATTGTGTATAATATAAAAGGAAGGGATTTATATTAAAATTTTGAATTCAAAAATTATTGAAAGGGAAGCTACCTTAGAAATTg                           <  3:116110/141‑1 (MQ=255)

                                                                                                                  aaaaaCCGCATCATTAACTGATAAGCAGAAGCGTATCACAAATAAAACTAAAAAATAGATTGTGTATAATATAAAAGGAAGGGATTTATATTAAAATTTTGAATTCAAAAATTATTGAAAGGGAAGCTACCTTAGAAATTg                           >  3:214615/1‑141 (MQ=255)

                                                                                                                    aaaCCGCATCATTAACTGATAAGCAGAAGCGTATCACAAATAAAACTAAAAAATAGATTGTGTATAATATAAAAGGAAGGGATTTATATTAAAATTTTGAATTCAAAAATTATTGAAAGGGAAGCTACCTTAGAAATTGaa                         >  1:800922/1‑141 (MQ=255)

                                                                                                                    aaaCCGCATCATTAACTGATAAGCAGAAGCGTATCACAAATAAAACTAAAAAATAGATTGTGTATAATATAAAAGGAAGGGATTTATATTAAAATTTTGAATTCAAAAATTATTGAAAGGGAAGCTACCTTAGAAATTGaa                         >  2:883526/1‑141 (MQ=255)

                                                                                                                        cGCATCATTAACTGATAAGCAGAAGCGTATCACAAATAAAACTAAAAAATAGATTGTGTATAATATAAAAGGAAGGGATTTATATTAAAATTTTGAATTCAAAAATTATTGAAAGGGAAGCTACCTTAGAAATTGAATCTa                     >  2:1105544/1‑141 (MQ=255)

                                                                                                                        cGCATCATTAACTGATAAGCAGAAGCGTATCACAAATAAAACTAAAAAATAGATTGTGTATAATATAAAAGGAAGGGATTTATATTAAAATTTTGAATTCAAAAATTATTGAAAGGGAAGCTACCTTAGAAATTGAATCTa                     >  2:403319/1‑141 (MQ=255)

                                                                                                                        cGCATCATTAACTGATAAGCAGAAGCGTATCACAAATAAAACTAAAAAATAGATTGTGTATAATATAAAAGGAAGGGATTTATATTAAAATTTTGAATTCAAAAATTATTGAAAGGGAAGCTACCTTAGAAATTGAATCTa                     >  2:725715/1‑141 (MQ=255)

                                                                                                                         gCATCATTAACCGATACGCagaagcatatcataaatgatgcggttttttcagccgcttcataaagggattttgaatgtatcagaacatatgaggtttgtgtgaattgctgttatgtttttaagaagcttatcataagtaat                    <  1:938294‑M2/141‑123 (MQ=255)

                                                                                                                          catcatTAACTGATAAGCAGAAGCGTATCACAAATAAAACTAAAAAATAGATTGTGTATAATATAAAAGGAAGGGATTTATATTAAAATTTTGAATTCAAAAATTATTGAAAGGGAAGCTACCTTAGAAATTGAATCTATg                   >  4:209329/1‑141 (MQ=255)

                                                                                                                           atcatTAACTGATAAGCAGAAGCGTATCACAAATAAAACTAAAAAATAGATTGTGTATAATATAAAAGGAAGGGATTTATATTAAAATTTTGAATTCAAAAATTATTGAAAGGGAAGCTACCTTAGAAATTGAATCTATgg                  >  1:575039/1‑141 (MQ=255)

                                                                                                                            tcatTAACTGATAAGCagaagcatatcataaatgatgcggttttttttttttttttttaaagtgaatttgaatgtatcagaacatatgaggtttatgtgaattgatgttatgtttttaagacgcttatcataagtaatgag                 <  2:248483‑M2/141‑126 (MQ=255)

                                                                                                                            tcatTAACTGATAAGCAGAAGCGTATCACAAATAAAACTAAAAAATAGATTGTGTATAATATAAAAGGAAGGGATTTATATTAAAATTTTGAATTCAAAAATTATTGAAAGGGAAGCTACCTTAGAAATTGAATCTATGGc                 >  1:331378/1‑141 (MQ=255)

                                                                                                                               ttAACTGATAAGCAGAAGCGTATCACAAATAAAACTAAAAAATAGATTGTGTATAATATAAAAGGAAGGGATTTATATTAAAATTTTGAATTCAAAAATTATTGAGAGGGAAGCTACCTTAGAAATTGAATCTATGGCCAc              <  1:1083771/141‑1 (MQ=255)

                                                                                                                               ttAACTGATAAGCAGAAGCGTATCACAAATAAAACTAAAAAATAGATTGTGTATAATATAAAAGGAAGGGATTTATATTAAAATTTTGAATTCAAAAATTATTGAAAGGGAAGCTACCTTAGAAATTGAATCTATGGCCAc              <  1:407267/141‑1 (MQ=255)

                                                                                                                                    tGATAAGCAGAAGCGTATCACAAATAAAACTAAAAAATAGATTGTGTATAATATAAAAGGAAGGGATTTATATTAAAATTTTGAATTCAAAAATTATTGAAAGGGAAGCTACCTTAGAAATTGAATCTATGGCCACTAACt         <  2:1048079/141‑1 (MQ=255)

                                                                                                                                        aaGCAGAAGCGTATCACAAATAAAACTAAAAAATAGATTGTGTATAATATAAAAGGAAGGGATTTATATTAAAATTTTGAATTCAAAAATTATTGAAAGGGAAGCTACCTTAGAAATTGAATCTATGGCCACTAACTGCtt     <  1:97866/141‑1 (MQ=255)

                                                                                                                                        aaGCAGAAGCGTATCACAAATAAAACTAAAAAATAGATTGTGTATAATATAAAAGGAAGGGATTTATATTAAAATTTTGAATTCAAAAATTATTGAAAGGGAAGCTACCTTAGAAATTGAATCTATGGCCACTAACTGCtt     >  1:1016369/1‑141 (MQ=255)

                                                                                                                                           cAGAAGCGTATCACAAATAAAACTAAAAAATAGATTGTGTATAATATAAAAGGAAGGGATTTATATTAAAATTTTGAATTCAAAAATTATTGAAAGGGAAGCTACCTTAGAAATTGAATCTATGGCCACTAACTGCttttt  >  4:298730/1‑141 (MQ=255)

ACTGTATTAGTTTAATCAGAAGACGTGTCTACTTTGTAAGCTTCTAAGAACTTATTATATGATATAGCGTTTGAGTTTTGTTGTTCTTCTATAAATTTCTGTAGTTATTTTTC‑AAAAACCGCATCATTAACTGATAAGCAGAAGCGTATCACAAATAAAACTAAAAAATAGATTGTGTATAATATAAAAGGAAGGGATTTATATTAAAATTTTGAATTCAAAAATTATTGAAAGGGAAGCTACCTTAGAAATTGAATCTATGGCCACTAACTGCTTTTT  >  USA300TCH1516_ALE/57720‑57998

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.