| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP000730 | = 553221 | 38 (0.690) | 5 (0.100) | 4/232 | NT | 12.7% | intergenic (+188/‑2871) | folB/rrf2 | dihydroneopterin aldolase/5S ribosomal RNA |
| ? | CP000730 | = 553245 | 34 (0.680) | intergenic (+212/‑2847) | folB/rrf2 | dihydroneopterin aldolase/5S ribosomal RNA | |||||
AGCCAGTTAAACGATGCTATAAAGATTTTGAATGAATATGATGGTATTAACGTATCTAATATTTCTCCGATTTATGAAACAGCACCAGTTGGGTATACTGAGCAACCTAACTTTTTAAATTTGTGTGTTGAAATTCAAACAACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP000730/553078‑553221‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcaaacaacaTTCCAACAGTTGTAATACTGT‑‑GAGTGTTGTTTGAATTTCAACACACAAATTTAAAAAGTTAGGTTGCTCAGTATACCCAACTGGTGCTGTTTCATAAATCGGAGAAATATTAGATACGTTAATACCATCATATTCATTC < CP000730/553245‑553107 AGCCAGTTAAACGATGCTATAAAGATTTTGAATGAATATGATGGTATTAACGTATCTAATATTTCTCCGATTTATGAAACAGCACCAGTTGGGTATACTGAGCAACCTAACTTTTTAAATTTGTGTGTTGAAATTCAACCA > 1:533500/1‑141AGCCAGTTAAACGATGCTATAAAGATTTTGAATGAATATGATGGTATTAACGTATCTAATATTTCTCCGATTTATGAAACAGCACCAGTTGGGTATACTGAGCAACCTAACTTTTTAAATTTGTGTGTTGAAATTCAAACA > 2:522681/1‑141 TTGAATGAATATGATGGTATTAACGTATCTAATATTTCTCCGATTTATGAAACAGCACCAGTTGGGTATACTGAGCAACCTAACTTTTTAAATTTGTGTGTTGAAATTCAAACAACATTCCAACAGTTGTAATACTGT‑‑GAG < 2:377444/141‑1 TGAATATGATGGTATTAACGTATCTAATATTTCTCCGATTTATGAAACAGCACCAGTTGGGTATACTGAGCAACCTAACTTTTTAAATTTGTGTGTTGAAATTCAAACAACATTCCAACAGTTGTAATACTGT‑‑GAGTGTTG < 1:215654/141‑1 CCGATTTATGAAACAGCACCAGTTGGGTATACTGAGCAACCTAACTTTTTAAATTTGTGTGTTGAAATTCAAACAACATTCCAACAGTTGTAATACTGT‑‑GAGTGTTG > 1:110896/1‑107 CCGATTTATGAAACAGCACCAGTTGGGTATACTGAGCAACCTAACTTTTTAAATTTGTGTGTTGAAATTCAAACAACATTCCAACAGTTGTAATACTGT‑‑GAGTGTTG < 2:110896/107‑1 TACTGAGCAACCTAACTTTTTAAATTTGTGTGTTGAAATTCAAACAACACTC‑‑ACAGTATTACAACTGTTGGAATGTTGTTTGAATTTCAACACACAAATTTAAAAAGTTAGGTTGCTCAGTATACCCAACTGGTGCTGTTT > 1:120081/1‑141 AAACAACATTCCAACAGTTGTAATACTGT‑‑GAGTGTTGTTTGAATTTCAACACACAAATTTAAAAAGTTAGGTTGCTCAGTATACCCAACTGGTGCTGTTTCATAAATCGGAGAAATATTAGATACGTTAATACCATCATAT < 1:162543/141‑1 CATTCCAACAGTTGTAATACTGT‑‑GAGTGTTGTTTGAATTTCAACACACAAATCTAAAAAGTTAGGTTGCTCACTATACCCAACTGGTGCTGTTTCATAAATCGGAGAAATATTAGATACGTTAATACCATCATATTCATTC > 2:222091/1‑141 AGCCAGTTAAACGATGCTATAAAGATTTTGAATGAATATGATGGTATTAACGTATCTAATATTTCTCCGATTTATGAAACAGCACCAGTTGGGTATACTGAGCAACCTAACTTTTTAAATTTGTGTGTTGAAATTCAAACAACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP000730/553078‑553221‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcaaacaacaTTCCAACAGTTGTAATACTGT‑‑GAGTGTTGTTTGAATTTCAACACACAAATTTAAAAAGTTAGGTTGCTCAGTATACCCAACTGGTGCTGTTTCATAAATCGGAGAAATATTAGATACGTTAATACCATCATATTCATTC < CP000730/553245‑553107 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |