New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	391559 =	25 (0.680)	3 (0.080)	3/250	NT	11.1%	coding (564/927 nt)	USA300HOU_0358	possible lactoylglutathione lyase
	?	CP000730	391580 =	24 (0.670)					coding (585/927 nt)	USA300HOU_0358	possible lactoylglutathione lyase

TTGTAAATTGCATCTAAGTCACTCATTTGTGGTGTATTAACTGCAATATGATGGATATAACCTCGTCCAGGTCTTTCACGTTGTCCCTGTTGCTCAATAACTACAAAATCCGAATATAAACCTTGTGGTGCTAATGTCAGCACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP000730/391702‑391559 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cacaAGGTTTATATTCGGATTTTGTAGTTATTGAGCAACAGGGACAACGTGAAAGACCTGGACGAGGTTATATCCATCATATTGCAGTTAATACACCACAAATGAGTGACTTAGATGCAATTTACAAGAAATTACAACAACAA  >  CP000730/391580‑391718                                                                                                                                                                                                                                                                                             TTGTAAATTGCATCTAAGTCACTCATTTGTGGTGTATTAACTGCAATATGATGGATATAACCTCGTCCAGGTCTTTCACGTTGTCCCTGTTGCTCAATAACTACAAAATCCGAATATAAACCTTGTGGTGCTAATGTCAGC                                                                                                                                                <  1:34069/141‑1                 AGTCACTCATTTGTGGTGTATTAACTGCAATATGATGGATATAACCTCGTCCAGGTCTTTCACGTTGTCCCTGTTGCTCAATAACTACAAAATCCGAATATAAACCTTGTGCTGACATTAGCACCACAAGGTTTATATTCG                                                                                                                                <  1:75764/141‑1                                             AATATGATGGATATAACCTCGTCCAGGTCTTTCACGTTGTCCCTGTTGCTCAATAACTACAAAATCCGAATATAAACCTTGTGCTGACATTAGCACCACAAGGTTTATATTCGGATTTTGTAGTTATTGAGCAACAGGGAC                                                                                                    <  1:158236/141‑1                                                                                                                           TTGTGGTGCTAATGTCAGCACAAGGTTTATATTCGGATTTTGTAGTTATTGAGCAACAGGGACAACGTGAAAGACCTGGACGAGGTTATATCCATCATATTGCAGTTAATACACCACAAATGAGTGACTTAGATGCAATTT                      <  2:158236/141‑1                                                                                                                                               CAAGGTTTATATTCGGATTTTGTAGTTATTGAGCAACAGGGACAACGTGAAAGACCTGGACGAGGTTATATCCATCATATTGCAGTTAATACACCACAAATGAGTGACTTAGATGCAATTTACAAGAAATTACAACAACAA  <  1:31612/141‑1                                                                                                                                                                                                                                                                                             TTGTAAATTGCATCTAAGTCACTCATTTGTGGTGTATTAACTGCAATATGATGGATATAACCTCGTCCAGGTCTTTCACGTTGTCCCTGTTGCTCAATAACTACAAAATCCGAATATAAACCTTGTGGTGCTAATGTCAGCACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP000730/391702‑391559 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cacaAGGTTTATATTCGGATTTTGTAGTTATTGAGCAACAGGGACAACGTGAAAGACCTGGACGAGGTTATATCCATCATATTGCAGTTAATACACCACAAATGAGTGACTTAGATGCAATTTACAAGAAATTACAACAACAA  >  CP000730/391580‑391718

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.