New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	391559 =	25 (0.680)	3 (0.080)	3/250	NT	11.1%	coding (564/927 nt)	USA300HOU_0358	possible lactoylglutathione lyase
	?	CP000730	391580 =	24 (0.670)					coding (585/927 nt)	USA300HOU_0358	possible lactoylglutathione lyase

ACGCTTATAGTGAAATACCTCAAGCATATCAAATTTTAGGAATAGGGCCAGTCGAATTAAGAGTTAGAAATGCAGCGCGTACGGTAGAATTTTTGGAAAATGTCTTAGGTTATCGCAAAAGAGATAATAAATCATTCGATGTGCTGACATTAGCACCACAAGGTTTATATTCGGATTTTGTAGTTATTGAGCAACAGGGACAACGTGAAAGACCTGGACGAGGTTATATCCATCATATTGCAGTTAATACACCACAAATGAGTGACTTAGATGCAATT  >  CP000730/391420‑391697                                                                                                                                            |                                                                                                                                           ttgttgttgtaatttcttgtaaattgcatctaagtcactcatttgtggtgtattaactgcaatatgatggatataacctcgtccaggtctttcacgttgtccctgttgctcaataactacaaaatccgaatataaaccttg                                                                                                                                           <  1:31612‑M1/2‑1 (MQ=255)      tataGTGAAATACCTCAAGCATATCAAATTTTAGGAATAGGGCCAGTCGAATTAAGAGTTAGAAATGCAGCGCGTACGGTAGAATTTTTGGAAAATGTCTTAGGTTATCGCAAAAGAGATAATAAATCATTCGATGTGCTg                                                                                                                                      <  1:285339/141‑1 (MQ=255)       ataGTGAAATACCTCAAGCATATCAAATTTTAGGAATAGGGCCAGTCGAATTAAGAGTTAGAAATGCAGCGCGTACGGTAGAATTTTTGGAAAATGTCTTAGGTTATCGCAAAAGAGATAATAAATCATTCGATGTGCTGa                                                                                                                                     <  1:233204/141‑1 (MQ=255)        taGTGAAATACCTCAAGCATATCAAATTTTAGGAATAGGGCCAGTCGAATTAAGAGTTAGAAATGCAGCGCGTACGGTAGAATTTTTGGAAAATGTCTTAGGTTATCGCAAAAGAGATAATAAATCATTCGATGTGCTGAc                                                                                                                                    >  1:50600/1‑141 (MQ=255)                   cTCAAGCATATCAAATTTTAGGAATAGGGCCAGTCGAATTAAGAGTTAGAAATGCAGCGCGTACGGTAGAATTTTTGGAAAATGTCTTAGGTTATCGCAAAAGAGATAATAAATCATTCGATGTGCTGACATTAGcaccac                                                                                                                         >  1:36006/1‑141 (MQ=255)                     aaattgcatctaagtcactcatttgtggtgtattaactgcaatatgatggatataacctcgtccaggtctttcacgttgtccctgttgctcaataactacaaaatccgaatataaacctTGTGCTGACATTAGCACCACaa                                                                                                                       <  2:158236‑M1/22‑1 (MQ=255)                                      aGGAATAGGGCCAGTCGAATTAAGAGTTAGAAATGCAGCGCGTACGGTAGAATTTTTGGAAAATGTCTTAGGTTATCGCAAAAGAGATAATAAATCATTCGATGTGCTGACATTAGCACCACAAGGTTTATATTCGGAttt                                                                                                      >  2:182197/1‑141 (MQ=255)                                                ccAGTCGAATTAAGAGTTAGAAATGCAGCGCGTACGGTAGAATTTTTGGAAAATGTCTTAGGTTATCGCAAAAGAGATAATAAATCATTCGATGTGCTGACATTAGCACCACAAGGTTTATATTCGGATTTTGTAGTTAtt                                                                                            <  1:403885/141‑1 (MQ=255)                                                     cGAATTAAGAGTTAGAAATGCAGCGCGTACGGTAGAATTTTTGGAAAATGTCTTAGGTTATCGCAAAAGAGATAATAAATCATTCGATGTGCTGACATTAGCACCACAAGGTTTATATTCGGATTTTGTAGTTATTGAGCa                                                                                       <  1:292006/141‑1 (MQ=255)                                                       aaTTAAGAGTTAGAAATGCAGCGCGTACGGTAGAATTTTTGGAAAATGTCTTAGGTTATCGCAAAAGAGATAATAAATCATTCGATGTGCTGACATTAGCACCACAAGGTTTATATTCGGATTTTGTAGTTATTGAGCAAc                                                                                     >  2:217519/1‑141 (MQ=255)                                                             gagTTAGAAATGCAGCGCGTACGTTAGAATTTTTGGAAAATGTCTTAGGTTATCGCAAAAGAGATAATAAATCATTCGATGTGCTGACATTAGCACCACAAGGTTTATATTCGGATTTTGTAGTTATTGAGCAACAGGGAc                                                                               <  2:245306/141‑1 (MQ=255)                                                               gTTAGAAATGCAGCGCGTACGGTAGAATTTTTGGAAAATGTCTTAGGTTATCGCAAAAGAGATAATAAATCATTCGATGTGCTGACATTAGCACCACAAGGTTTATATTCGGATTTTGTAGTTATTGAGCAACAGGGACaa                                                                             >  2:456922/1‑141 (MQ=255)                                                                        gCAGCGCGTACGGTAGAATTTTTGGAAAATGTCTTAGGTTATCGCAAAAGAGATAATAAATCATTCGATGTGCTGACATTAGCACCACAAGGTTTATATTCGGATTTTGTAGTTATTGAGCAACAGGGACAACGTGAAAGa                                                                    >  2:272448/1‑141 (MQ=255)                                                                         cAGCGCGTACGGTAGAATTTTTGGAAAATGTCTTAGGTTATCGCAAAAGAGATAATAAATCATTCGATGTGCTGACATTAGCACCACAAGGTTTATATTCGGATTTTGTAGTTATTGAGCAACAGGGACAACGTGAAAGAc                                                                   >  2:40342/1‑141 (MQ=255)                                                                         cAGCGCGTACGGTAGAATCCTTGGAAAATGTCTTAGGTTATCGCAAAAGAGATAATAAATCATTCGATGTGCTGACATTAGCACCACAAGGTTTATATTCGGATTTTGTAGTTATTGAGCAACAGGGACAACGTGAAAGAc                                                                   >  2:48380/1‑141 (MQ=255)                                                                            cgcgTACGGTAGAATTTTTGGAAAATGTCTTAGGTTATCGCAAAAGAGATAATAAATCATTCGATGTGCTGACATTAGCACCACAAGGTTTATATTCGGATTTTGTAGTTATTGAGCAACAGGGACAACGTGAAAGACCTg                                                                >  1:197679/1‑141 (MQ=255)                                                                              cgTACGGTAGAATTTTTGGAAAATGTCTTAGGTTATCGCAAAAGAGATAATAAATCATTCGATGTGCTGACATTAGCACCACAAGGTTTATATTCGGATTTTGTAGTTATTGAGCAACAGGGACAACGTGAAAGACCTGGa                                                              <  1:283160/141‑1 (MQ=255)                                                                              cgTACGGTAGAATTTTTGGAAAATGTCTTAGGTTATCGCAAAAGAGATAATAAATCATTCGATGTGCTGACATTAGCACCACAAGGTTTATATTCGGATTTTGTAGTTATTGAGCAACAGGGACAACGTGAAAGACCTGGa                                                              <  2:412963/141‑1 (MQ=255)                                                                                         aTTTTTTTAAATTGTCTTAGGTTATCGCAAAAGAGATAATAAATCATTCGATGTGCTGACATTAGCACCACAAGGTTTATATTCGGATTTTGTAGTTATTGAGCAACAGGGACAACGTGAAAGACCTGGCCGAGGTTatat                                                   >  2:235346/1‑141 (MQ=255)                                                                                                  aaaTGTCTTAGGTTATCGCAAAAGAGATAATAAATCATTCGATGTGCTGACATTAGCACCACAAGGTTTATATTCGGATTTTGTAGTTATTGAGCAACAGGGACAACGTGAAAGACCTGGACGAGGTTATATCCATCatat                                          <  2:329348/141‑1 (MQ=255)                                                                                                   gtccctgttgctcaataactacaaaatccgaatataaacctTGTGGTGCTAATGTCAGCACAAGGTTTATATTCGGATTTTGTAGTTATTGAGCAACAGGGACAACGTGAAAGACCTGGACGAGGTTATATCCATCATAtt                                         <  1:158236‑M1/100‑1 (MQ=255)                                                                                                      gTCTTAGGTTATCGCAAAAGAGATAATAAATCATTCGATGTGCTGACATTAGCACCACAAGGTTTATATTCGGATTTTGTAGTTATTGAGCAACAGGGACAACGTGAAAGACCTGGACGAGGTTATATCCATCATATTGCa                                      >  2:259463/1‑141 (MQ=255)                                                                                                                  cGCAAAAGAGATAATAAATCATTCGATGTGCTGACATTAGCACCACAAGGTTTATATTCGGATTTTGTAGTTATTGAGCAACAGGGACAACGTGAAAGACCTGGACGAGGTTATATCCATCATATTGCAGTTAATAcacca                          <  1:97620/141‑1 (MQ=255)                                                                                                                  cGCAAAAGAGATAATAAATCATTCGATGTGCTGACATTAGCACCACAAGGTTTATATTCGGATTTTGTAGTTATTGAGCAACAGGGACAACGTGAAAGACCTGGACGAGGTTATATCCATCATATTGCAGTTAATAcacca                          <  2:446970/141‑1 (MQ=255)                                                                                                                    cAAAAGAGATAATAAATCATTCGATGTGCTGACATTAGCACCACAAGGTTTATATTCGGATTTTGTAGTTATTGAGCAACAGGGACAACGTGAAAGACCTGGACGAGGTTATATCCATCATATTGCAGTTAATACACcaca                        >  1:38878/1‑141 (MQ=255)                                                                                                                      aaaGAGATAATAAATCATTCGATGTGCTGACATTAGCACCACAAGGTTTATATTCGGATTTTGTAGTTATTGAGCAACAGGGACAACGTGAAAGACCTGGACGAGGTTATATCCATCATATTGCAGTTAATACACCACaaa                      >  1:63059/1‑141 (MQ=255)                                                                                                                          agaTAATAAATCATTCGATGTGCTGACATTAGCACCACAAGGTTTATATTCGGATTTTGTAGTTATTGAGCAACAGGGACAACGTGAAAGACCTGGACGAGGTTATATCCATCATATTGCAGTTAATACACCACAAATGAg                  <  1:432286/141‑1 (MQ=255)                                                                                                                               cgaatataaacctTGTGGTGCTAATGTCAGCACAAGGTTTATATTCGGATTTTGTAGTTATTGAGCAACAGGGACAACGTGAAAGACCTGGACGAGGTTATATCCATCATATTGCAGTTAATACACCACAAATGAGTGACt             <  1:75764‑M1/128‑1 (MQ=255)                                                                                                                                taaATCATTCGATGTGCTGACATTAGCACCACAAGGTTTATATTCGGATTTTGTAGTTATTGAGCAACAGGGACAACGTGAAAGACCTGGACGAGGTTATATCCATCATATTGCAGTTAATACACCACAAATGAGTGACtt            >  2:31835/1‑141 (MQ=255)                                                                                                                                        tCGATGTGCTGACATTAGCACCACAAGGTTTATATTCGGATTTTGTAGTCATTGAGCAACAGGGACAACGTGAAAGACCTGGACGAGGTTATATCCATCATATTGCAGTTAATACACCACAAATGAGTGACTTAGATGCaa    >  2:122706/1‑141 (MQ=255)                                                                                                                                          gATGTGCTGACATTAGCACCACAAGGTTTATATTCGGATTTTGTAGTTATTGAGCAACAGGGACAACGTGAAAGACCTGGACGAGGTTATATCCATCATATTGCAGTTAATACACCACAAATGAGTGACTTAGATGCAAtt  <  1:195775/141‑1 (MQ=255)                                                                                                                                            |                                                                                                                                           ACGCTTATAGTGAAATACCTCAAGCATATCAAATTTTAGGAATAGGGCCAGTCGAATTAAGAGTTAGAAATGCAGCGCGTACGGTAGAATTTTTGGAAAATGTCTTAGGTTATCGCAAAAGAGATAATAAATCATTCGATGTGCTGACATTAGCACCACAAGGTTTATATTCGGATTTTGTAGTTATTGAGCAACAGGGACAACGTGAAAGACCTGGACGAGGTTATATCCATCATATTGCAGTTAATACACCACAAATGAGTGACTTAGATGCAATT  >  CP000730/391420‑391697

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.