New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	895785 =	12 (0.450)	44 (1.910)	33/224	NT	76.3%	coding (806/822 nt)	USA300HOU_0849	ABC superfamily ATP binding cassette transporter, binding protein
	?	CP000730	= 909740	17 (0.740)					intergenic (‑663/‑371)	ear/USA300HOU_0868	Ear protein/hypothetical protein

AATCTGAGCGTATTTTTTTGTTTAAAATTCGATAATTTGCATATACTGCCCCTTTTGTGCCC‑TTTTTTATTTTCAATACCACAAAAATAACCCCTTAATCGTTGTTATTAAAGGGTATTTTTATTTAATTGGTATTATTTAGCAGGAATAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP000730/895935‑895785 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttatttagcaggaataaTTAGCCAGATTATCAAGGAAGTTCAAGGGCAATCAAAACATTGTTATATATGCATTTATAAAATTTTCAAGATAATTTATTATTCATACCCTTGCCCTTTGTTTCAAAATTATGCCCTTTTTTTGCCCTTGAAAACAA  <  CP000730/909740‑909603                                                                                                                                                                                                                                                                                                    AATCTGAGCGTATTTTTTTGTTTAAAATTCGATAATTTGCATATACTGCCCCTTTTGTGCCC‑TTTTTTATTTTCAATACCACAAAAATAACCCCTTAATCGTTGTTATTAAAGGGTATTTTTATTTAATTGGTATTATTT                                                                                                                                                       >  1:297286/1‑140 AATCTGAGCGTATTTTTTTGTTTAAAATTCGATAATTTGCATATACTGCCCCTTTTGTGCCC‑TTTTTTATTTTCAATACCACAAAAATAACCCCTTAATCGTAGTTATTAAAGAGTATTTTTATTTAATTGGAATTATTT                                                                                                                                                       >  1:93848/1‑140   TCTGAGCGTATTTTTTTGTTTAAAATTCGATAATTTGCATATACTGCCCCTTTTGTGCCCTTTTTTTATTTTCAATACCACAAAAATAACCCCTTAATCGTTGTTATTAAAGGGTATTTTTATTTAATTGGTATTTTTTA                                                                                                                                                      >  1:135395/1‑140           TATTTTTTTGTTTAAAATTCGATAATTTGCATATACTGCCCCTTTTGTGCCC‑TTTTTTATTTTCAATACCACAAAAATAACCCCTTAATCGTTGTTATTAAAGGGTATTTTTATTTAATTGGTATTATTTAGCAGGAATA                                                                                                                                             <  2:51712/140‑1           TATTTTTTTGTTTAAAATTCGATAATTTGCATATACTGCCCCTTTTGTGCCC‑TTTTTTATTTTCAATACCACAAAAATAACCCCTTAATCGTTGTTATTAAAGGGTATTTTTATTTAATTGGTATTATTTAGCAGGAATA                                                                                                                                             <  2:114756/140‑1               tttgttTTTAAAATTCGATAATTTGCATATACTGCCCCTTTTGTGCCC‑TTTTTTATTTTAAGTACCACAAAAATAACCCCGTAATCGTTGTTATTAAAGGGTATTTTTATTTAATTGGTATTATTTCGCAGGAATAATTA                                                                                                                                         <  2:111368/134‑1                 TTTGTTTAAAATTCGATAATTTGCATATACTGCCCCTTTTGTGCCC‑TTTTTTATTTTCAATACCACAAAAATAACCCCTTAATCGTTGTTATTAAAGGGTATTTTTATTTAATTGGTATTATTTAGCAGGAATAATTAGC                                                                                                                                       <  2:120201/140‑1                     TTTAAAATTCGATAATTTGCATATACTGCCCCTTTTGTGCCC‑TTTTTTATTTTCAATACCACAAAAATAACCCCTTAATCGTTGTTATTAAAGGGTATTTTTATTTAATTGGTATTATTTAGCAGGAATAATTAGCCAGA                                                                                                                                   >  1:276527/1‑140                            TTCGATAATTTGCATATACTGCCCCTTTTGTGCCC‑TTTTTTATTTTCAATACCACAAAAATAACCCCTTAATCGTTGTTATTAAAGGGTATTTTTATTTAATTGGTATTATTTAGCAGGAATAATTAGCCAGATTATCAA                                                                                                                            <  2:268517/140‑1                                      tgaattTACTGCCCCTTTTGTGCCC‑TTTTTTAATTTCAATACCACAAAAATAACCCCTTAATCGTTGTTATTAAAGGGTATTTTTATTTAATTGGTATTATTTAGCAGGAATAATTAGCCAGATTATCAAGGAAGTTCAA                                                                                                                  <  1:24838/134‑1                                       ggATATACTGCCCCTTTTGTGCCC‑TTTTTTATTTTCAATACCACAAAAATAACCCCTTAATCGTTGTTATTAAAGGGTATTTTTATTTAATTGGTATTATTTAGCAGGAATAATTAGCCAGATTATCAAGGAAGTTCAAG                                                                                                                 <  2:231081/138‑1                                         ATATACTGCCCCTTTTGTGCCC‑TTTTTTATTTTCAATACCACAAAAATAACCCCTTAATCGTTGTTATTAAAGGGTATTTTTATTTAATTGGTATTATTTAGCAGGAATAATTAGCCAGATTATCAAGGAAGTTCAAGGG                                                                                                               <  1:257469/140‑1                                         ATATACTGCCCCTTTTGTGCCC‑TTTTTTATTTTCAATACCACAAAAATAACCCCTTAATCGTTGTTATTAAAGGGTATTTTTATTTAATTGGTATTATTTAGCAGGAATAAATAGCCAGATTATCAAGGAAGTTCAAGGG                                                                                                               >  2:265239/1‑140                                             cCTGCCCCTTTTGTTCCC‑TTTTTTATTTTCAATACCACAAAAATAACCCCTTAATCGTTGTTATTAAAGGGTATTTTTATTTAATTGGTATTATTTAGCAGGAATAATTAGCCAGATTATCAAGGAAGTTCAAGGGCAAT                                                                                                           <  2:59753/139‑1                                              CTGCCCCTTTTGTGCCC‑TTTTTTATTTTCAATACCACAAAAATAACCCCTTAATCGTTGTTATTAAAGGGTATTTTTATTTAATTGGTATTATTTAGCAGGAATAATTAGCCAGATTATCAAGGAAGTTCAAGGGCAATC                                                                                                          <  2:226704/140‑1                                               ttCCCCTTTTGTGCCC‑TTTTTTATTTTCAATACCACAAAAATAACCCCTTAATCGTTGTTATTAAAGGGTATTTTTATTTAATTGGTATTATTTAGCAGGAATAATTAGCCAGATTATCAAGGAAGTTCAAGGGCAATCA                                                                                                         <  2:190399/138‑1                                               TGCCCCTTTTGTGCCC‑TTTTTTATTTTCAATACCACAAAAATAACCCCTTAATCGTTGTTATTAAAGGGTATTTTTATTTAATTGGTATTATTTAGCAGGAATAATTAGCCAGATTATCAAGGAAGTTCAAGGGCAATCA                                                                                                         <  2:14610/140‑1                                                tctctttttagtCCC‑TTTGTTATTTTCAATAGAAAAAAAATAACCCCTTAATCTTTCTTATTAAAGGGTATTTTTATTTAATTGGTATTATTTAGCAGGAATAATTAGCCAGATTATCAAGGAAGTTCAAGGGCAATCAA                                                                                                        <  1:21905/128‑1                                                tCCCCTTTTGTGCCC‑TTTTTTATTTTCAATACCACAAAAATAACCCCTTAATCGTTGTTATTAAAGGGTATTTTTATTTAATTGGTATTATTTAGCAGGAATAATTAGCCAGATTATCAAGGAAGTTCAAGGGCAATCAA                                                                                                        <  2:318642/139‑1                                                   ccgTTTTTGCCC‑TTTTTTATTTTCAATACCCTCAAAATAACCCCTTTATTGTTGTTATTAAAGGGTATTTTTATTTAATTGGTATTATTTAGCAGGAATAATTAGCCAGATTATCAAGGAAGTTCAAGGGCAATCAAAAC                                                                                                     <  2:16077/137‑1                                                     TTTTGTGCCC‑TTTTTTATTTTCAATACCACAAAAATAACCCCTTAATCGTTGTTATTAAAGGGTATTTTTATTTAATTGGTCTTATTCATCAGGAATAATTAGCCAGCTTATCAAGGAAGTTCAAGGGCAATCAAAACAT                                                                                                   >  1:299677/1‑140                                                       TTGTGCCC‑TTTTTTATTTTCAATACCACAAAAATAACCCCTTAATCGTTTTTATTAAAGGGTATTTTTTTTTAATTGGTATTATTTAGCAGTACTAATTACACGGATTATCAAGGAAGTTCAAGGCGAATCAAAACATTt                                                                                                 >  2:92674/1‑139                                                       TTGTGCCC‑TTTTTTATTTTCAATACCACAAAAATAACCCCTTAATCGTTGTTATTAAAGGGTATTTTTATTTAATTGGTATTATTTAGCAGGAATAATTAGCCAGATTATCAAGGAAGTTCAAGGGCAATCAAAACATTG                                                                                                 <  2:103777/140‑1                                                       TTGTGCCC‑TTTTTTATTTTCAATACCACAAAAATAACCCCTTAATCGTTGTTATTAAAGGGTATTTTTATTTAATTGGTATTATTTAGCACGAATAATTAGCCAGATTATGAAGGAAGTTCAAGGGCAAGCAAAACATTG                                                                                                 >  2:209275/1‑140                                                        TGTGCCC‑TTTTTTATTTTCAATACCACAAAAATAACCCCTTAATCGTTGTTATTAAAGGGTATTTTTATTTAATTGGTATTATTTAGCAGGAATAATTAGCCAGATTATCAAGGAAGTTCAAGGGCAATCAAAACATTGT                                                                                                >  2:166077/1‑140                                                         GTGCCC‑TTTTTTATTTTCAATACCACAAAAATAACCCCTTAATCGTTGTTATTAAAGGGTATTTTTATTTAATTGGTATTATTTAGCAGGAATAATTAGCCAGATTATCAAGAAAGTTCAAGGGCAATCAAAACATTGTT                                                                                               >  2:132494/1‑140                                                         GTGCCC‑TTTTTTATTTTCAATACCACAAAAATAACCCCTTAATCGTTGTAATTAAAGGGTATTTTTATTTAATTTGTATTCTTTATCAAGAATAATTAGCCAAGTTATACACGAAGTTCAAGGGTAATCAAAACATTGat                                                                                               >  2:209381/1‑138                                                         GTGCCC‑TTTTTTATTTTCAATACAACAAAAATAACCCCTTCATAGTTATTATTAACGGGTATTTTTATTTAATTAGTATTATTTAGCAGGAATAATTAGAAAGATTATCAAGGAAGTTCAAGGGCAATCAAAAAATTGTT                                                                                               >  2:9134/1‑140                                                            CCC‑TTTTTTATTTTCAATACCACAAAAATAACCCCTTAATCGTTGTTATTAAAGGGTATTTTTATTTAATTGGTATTATTTAGCAGGAATAATTAGCCAGATTATCACGGCAGTTCAAGGGCAATCAAAACATTGTTATA                                                                                            >  1:263162/1‑140                                                            CCC‑TTTTTTATTTTCAATACCACAAAAATAACCCCTTAATCGTTGTTATTAAAGGGTATTTTTATTTAATTGGTATTATTTAGCAGGAATAATTAGCCAGATTATCAAGGAAGTTCAAGGGCCATCAAAACATTGTTATA                                                                                            >  1:263225/1‑140                                                                   TTTATTATAAATATCAAAAAAATAAACCCTTAATCGTTGTTAGTAAAAGGTATTGGTATTTAATGGGTATTATTTATCAGGAATAATTAGCCAGATTATCAAGGAAGTTCAAGGGCAATCAAAACATTTTTATATATGCA                                                                                      >  2:187278/1‑140                                                                      ATTTTCAATACCACAAAAATAACCCCTTAATCGTTGTTATTAAAGGGTATTTTTATTTAATTGGTATTATTTAGCAGGAATAATTAGCCAGATTATCAAGGAAGTTCAAGGGCAATCAAAACATTGTTATATATGCATTT                                                                                   <  1:251219/140‑1                                                                         TTCAATACCACAAAAATAACCCCTTAATCGTTGTTATTAAAGGGTATTTTTATTTAATTGGTATTATTTAGCAGGAATAATTAGCCAGATTATCAAGGAAGTTCAAGGGCAATCAAAACATTGTTATATATGCATTTATA                                                                                >  1:22767/1‑140                                                                         TTCAATACCACAAAAATAACCACTTAATAGTTGTTATTAAAGGGTATTTTTATTTAATTGGTATTATTTAGCAGGAATAATTAGCCAGATTATAAAGGAAGTTCAAGGGCAATCAAAAAATAGTTATATATGAATTTATA                                                                                >  1:141632/1‑140                                                                                       AATAACCCCTTAATCGTTGTTATTAAAGGGTATTTTTATTTAATTGGTATTATTTAGCAGGAATAATTAGCCAGATTATCAAGGAAGTTCAAGGGCAATCAAAACATTGTTATATATGCATTTATAAAATTTTCAAGATA                                                                  >  1:297422/1‑140                                                                                          AACCCCTTAATCGTTGTTATTAAAGGGTATTTTTATTTAATTGGTATTATTTAGCAGGAATAATTAGCCAGATTATCAAGGAAGTTCAAGGGCAATCAAAACATTGTTATATATGCATTTATAAAATTTTCAAGATAATT                                                               <  2:276527/140‑1                                                                                              CCTTAATCGTTGTTATTAAAGGGTATTTTTATTTAATTGGTATTATTTAGCAGGAATAATTAGCCAGATTATCAAGGAAGTTCAAGGGCAATCAAAACATTGTTATATGTGCATTTATAAAATTTTCAAGATAATTTATT                                                           >  1:214508/1‑140                                                                                               CTTAATCGTTGTTATTAAAGGGTATTTTTATTTAATTGGTATTATTTAGCAGGAATAATTAGCCAGATTATCAAGGAAGTTCAAGGGCAATCAAAACATTGTTATATATGCATTTATAAAATTTTCAAGATAATTTATTA                                                          <  2:297286/140‑1                                                                                                   ATCGTTGTTATTAAAGGGTATTTTTATTTAATTGGTATTATTTAGCAGGAATAATTAGCCAGATTATCAAGGAAGTTCAAGGGCAATCAAAACATTGTTATATATGCATTTATAAAATTTTCAAGATAATTTATTATTCA                                                      <  1:177329/140‑1                                                                                                              TAAAGGGTATTTTTATTTAATTGGTATTATTTAGCAGGAATAATTAGCCAGATTATCAAGGAAGTTCAAGGGCAATCAAAACATTGTTATATATGCATTTATAAAATTTTCAAGATAATTTATTATTCATACCCTTGCCC                                           >  1:160026/1‑140                                                                                                                     TATTTTTATTTAATTGGTATTATTTAGCAGGAATAATTAGCCAGATTATCAAGGAAGTTCAAGGGCAATCAAAACATTGTTATATATGCATTTATAAAATTTTCAAGATAATTTATTATTCATACCCTTGCCCTTTGTTT                                    >  1:99364/1‑140                                                                                                                       TTTTTATTTAATTGGTATTATTTAGCAGGAATAATTAGCCAGATTATCAAGGAAGTTCAAGGGCAATCAAAACATTGTTATATATGCATTTATAAAATTTTCAAGATAATTTATTATTCATACCCTTGCCCTTTGTTTCA                                  >  1:67445/1‑140                                                                                                                       TTTTTATTTAATTGGTATTATTTAGCAGGAATAATTAGCCAGATTATCAAGGAAGTTCAAGGGCAATCAAAACATTGTTATATATGCATTTATAAAATTTTCAAGATAATTTATTATTCATACCCTTGCCCTTTGTTTCA                                  >  2:270356/1‑140                                                                                                                       TTTTTATTTAATTGGTATTATTTAGCAGGAATAATTAGCCAGATTATCAAGGAAGTTCAAGGGCAATCAAAACATTGTTATATATGCATTTATAAAATTTTCAAGATAATTTATTATTCATACCCTTGCCCTTTGTTTCA                                  >  2:5556/1‑140                                                                                                                        TTTTATTTAATTGGTATTATTTAGCAGGAATAATTAGCCAGATTATCAAGGAAGTTCAAGGGCAATCAAAACATTGTTATATATGCATTTATAAAATTTTCAAGATAATTTATTATTCATACCCTTACCCTTTGTTTCAA                                 >  1:141516/1‑140                                                                                                                        TTTTATTTAATTGGTATTATTTAGCAGGAATAATTAGCCAGATTATCAAGGAAGTTCAAGGGCAATCAAAACATTGTTATATATGCATTTATAAAATTTTCAAGATAATATATTATTCATACCCTTGCACCTTGTTACAA                                 >  1:97580/1‑140                                                                                                                         TTTATTTAATTGGTATTATTTAGCAGGAATAATTACCCAGAGGAGCCAGGAAGTTCAAGGGCAATCAAAACATTGTTATATATGCATTTATAAAATTTTCAAGATAATTTATTATTCATACCCTTGCCCTTTGTTTCAca                                >  1:154054/1‑138                                                                                                                           TATTTAATTGGTATTATTTAGCAGGAATAATTAGCCAGATTATCAAGGAAGTTCAAGGGCAATCAAAACATTGTTATATATGCATTTATAAAATTTTCAAGATAATTTATTATTCATACCCTTGCCCTTTGTTTCAAAAT                              >  2:280448/1‑140                                                                                                                                 ATTGGTATTATTTAGCAGGAATAATTAGCCAGATTATCAAGGAAGTTCAAGGGCAATCAAAACATTGTTATATATGCATTTATAAAATTTTCAAGATAATTTATTATTCATACCCTTGCCCTTTGTTTCAAAATTATGCC                        >  1:205062/1‑140                                                                                                                                  TTGGTATTATTTAGCAGGAATAATTAGCCAGATTATCAAGGAAGTTCAAGGGCAATCAAAACATTGTTATATATGCATTTATAAAATTTTCAAGATAATTTATTATTCATACCCTTGCCCTTTGTTTCAAAATTATGCCC                       <  1:145690/140‑1                                                                                                                                  TTGGTATTATTTAGCAGGAATAATTAGCCAGATTATCAAGGAAGTTCAAGGGCAATCAAAACATTGTTATATATGCATTTATAAAATTTTCAAGATAATTTATTATTCATACCCTTGCCCTTTGTTTCAAAATTATGCCC                       <  1:302966/140‑1                                                                                                                                   TGGTATTATTTAGCAGGAATAATTAGCCAGATTATAAACGATCTGCGACGTCAATCAAAACATTGTTATATATGCATTTATAAAATTTTCAAGATAATTTATTATTCATACCCTTGCCCTTTGTTTCAAAATTATGCCCT                      <  2:305971/140‑1                                                                                                                                         TATTTAGCAGGAATAATTAGCCAGATTATCAAGGAAGTTCAAGGGCAATCAAAACATTGTTATATATGCATTTATAAAATTTTCAAGATAATTTCTTTTTCATACCCTTGCCCTTTGTTTCAAAATTATACCATTTTTTT                >  1:11182/1‑140                                                                                                                                         TATTTAGCAGGAATAATTAGCCAGATTATCAAGGAAGTTCAAGGGCAATCAAAACATTGTTATATATGCATTTATAAAATTTTCAAGATAATTTATTATTCATACCCTTGCCCTTTGTTTCAAAATTATGCCCTTTTTTT                >  1:162881/1‑140                                                                                                                                                       AATTAGCCAGATTATCAAGGAAGTTCAAGGGCGATCAAAACATTGTTATATATGCATTTATAAAATTTTCAAGATAATTTATTATTCATACCCTTGCCCTTTGTTTCGAAATTATGCCCTTTTTTTGCCCTTGCAAACAA  >  1:221936/1‑140                                                                                                                                                       AATTAGCCAGATTATCAAGGAAGTTCAAGGGCAATCAAAACATTGTTATATATGCATTTATAAACTTTTCAAGATAATCTATTATTCATACCCTTGCCCTTTGTTTCAAAATTATGCCCTTTTTTTGCCCTTGAAAACAA  <  1:188554/140‑1                                                                                                                                                       AATTAGCCAGATTATCAAGGAAGTTCAAGGGCAATCAAAACATTGTTATATATGCATTTATAAAATTTTCAAGATAATTTATTATTCATACCCTTGCCCTTTGTTTCAAAATTATGCCCTTTTTTTTTCTTTTAAAACAA  >  2:212221/1‑140                                                                                                                                                       AATTAGCCAGATTATCAAGGAAGTTCAAGGGCAATCAAAACATTGTTATATATGCATTTATAAAATTTTCAAGATAATTTATTATTCATACCCTTGCCCTTTGTTTCAAAATTATGCCCTTTTTTTTCCCTTGAAAACAA  >  2:8737/1‑140                                                                                                                                                       AATTAGCCAGATTATCAAGGAAGTTCAAGGGCAATCAAAACATTGTTATATATGCATTTATAAAATTTTCAAGATAATTTATTATTCATACCCTTGCCCTTTGTTTCAAAATTATGCCCTTTTTTTGCCCTTGAAAACAA  <  2:162881/140‑1                                                                                                                                                       AATTAGCCAGATTATCAAGGAAGTTCAAGGGCAATCAAAACATTGTTATATATGCATTTATAAAATTTTCAAGATAATTTATTATTCATACCCTTGCCCTTTGTTTCAAAATTATGCCCTTTTTTTGCCCTTGAAAACAA  <  2:125542/140‑1                                                                                                                                                                                                                                                                                                    AATCTGAGCGTATTTTTTTGTTTAAAATTCGATAATTTGCATATACTGCCCCTTTTGTGCCC‑TTTTTTATTTTCAATACCACAAAAATAACCCCTTAATCGTTGTTATTAAAGGGTATTTTTATTTAATTGGTATTATTTAGCAGGAATAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP000730/895935‑895785 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttatttagcaggaataaTTAGCCAGATTATCAAGGAAGTTCAAGGGCAATCAAAACATTGTTATATATGCATTTATAAAATTTTCAAGATAATTTATTATTCATACCCTTGCCCTTTGTTTCAAAATTATGCCCTTTTTTTGCCCTTGAAAACAA  <  CP000730/909740‑909603

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.