New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP000730 895785 =12 (0.450)44 (1.910) 33/224 NT 76.3% coding (806/822 nt) USA300HOU_0849 ABC superfamily ATP binding cassette transporter, binding protein
?CP000730 = 909740 17 (0.740)intergenic (‑663/‑371) ear/USA300HOU_0868 Ear protein/hypothetical protein

AGTGCGAAAGATAATCCTTATGCAAACTTAATTGCTGTTAAAGAAGGACATCAAGATGATAAGAAAATCAAAGCATTAATTGAAGTATTACAATCTAAAGATATTCAAGACTTCATTAATGAAAAATACAATGGTGCAGTTATTCCTGCTAAATAATACCAATTAAATAAAAATACCCTTTAATAACAACGATTAAGGGGTTATTTTTGTGGTATTGAAAATAAAAAAGGGCACAAAAGGGGCAGTATATGCAAATTATCGAATTTTAAACAAAAAA  >  CP000730/895646‑895922
                                                                                                                                           |                                                                                                                                         
aGTGCGAAAGATAATCCTTATGCAAACTTAATTGCTGTTAAAGAAGGACATCAAGATGATAAGAAAATCAAAGCATTAATTGAAGTATTACAATCTAAAGATATTCAAGACTTCATTAATGAAAAATACAATGGTGCAGt                                                                                                                                           <  1:292626/140‑1 (MQ=255)
aGTGCGAAAGATAATCCTTATGCAAACTTAATTGCTGTTAAAGAAGGACATCAAGATGATAAGAAAATCAAAGCATTAATTGAAGTATTACAATCTAAAGATATTCAAGACTTCATTAATGAAAAATACAATGGTGCAGt                                                                                                                                           >  2:285658/1‑140 (MQ=255)
 ttgttttcaagggcaaaaaaagggcataattttgaaacaaagggcaagggtatgaataatagattatcttgaaaagtttataaatgcatatataacaatgttttgattgcccttgaacttccttgataatctggctaatt                                                                                                                                          <  1:188554‑M1/2‑1 (MQ=255)
 ttgttttcaagggcaaaaaaagggcataattttgaaacaaagggcaagggtatgaataataaattatcttgaaaattttataaatgcatatataacaatgttttgattgcccttgaacttccttgataatctggctaatt                                                                                                                                          <  2:125542‑M1/2‑1 (MQ=255)
 ttgttttcaagggcaaaaaaagggcataattttgaaacaaagggcaagggtatgaataataaattatcttgaaaattttataaatgcatatataacaatgttttgattgcccttgaacttccttgataatctggctaatt                                                                                                                                          <  2:162881‑M1/2‑1 (MQ=255)
 ttgttttcaagggaaaaaaaagggcataattttgaaacaaagggcaagggtatgaataataaattatcttgaaaattttataaatgcatatataacaatgttttgattgcccttgaacttccttgataatctggctaatt                                                                                                                                          >  2:8737‑M1/139‑140 (MQ=255)
 ttgttttaaaagaaaaaaaaagggcataattttgaaacaaagggcaagggtatgaataataaattatcttgaaaattttataaatgcatatataacaatgttttgattgcccttgaacttccttgataatctggctaatt                                                                                                                                          >  2:212221‑M1/139‑140 (MQ=255)
 ttgtttgcaagggcaaaaaaagggcataatttcgaaacaaagggcaagggtatgaataataaattatcttgaaaattttataaatgcatatataacaatgttttgatcgcccttgaacttccttgataatctggctaatt                                                                                                                                          >  1:221936‑M1/139‑140 (MQ=255)
    cGAAAGATAATCCTTATGCAAACTTAATTGCTGTTAAAGAAGGACATCAAGATGATAAGAAAATCAAAGCATTAATTGAAGTATTACAATCTAAAGATATTCAAGACTTCATTAATGAAAAATACAATGGTGCAGTTAtt                                                                                                                                       <  1:281879/140‑1 (MQ=255)
      aaaGATAATCCTTATGCAAACTTAATTGCTGTTAAAGAAGGACATCAAGATGATAAGACCATAAATTTAGTAATTGAAGTATTACAATCTAAAGATATTCAAGACTTCATTAATGAAAAATACAATGGTGCAGTTATTcc                                                                                                                                     <  1:232966/140‑1 (MQ=255)
             aTCCTTATGCAAACTTAATTGCTGTTAAAGAAGGACATCAAGATGATAAGAAAATCAAAGCATTAATTGAAGTATTACAATCTAAAGATATTCAAGACTTCATTAATGAAAAATACATTGGTGCAGTTATTCCTGCTaaa                                                                                                                              >  1:295133/1‑140 (MQ=255)
               aaaaaaatggtataattttgaaacaaagggcaagggtatgaaaaagaaattatcttgaaaattttataaatgcatatataacaatgttttgattgcccttgaacttccttgataatctggctaaTTATTCCTGCTAaata                                                                                                                            >  1:11182‑M1/125‑140 (MQ=255)
               aaaaaaagggcataattttgaaacaaagggcaagggtatgaataataaattatcttgaaaattttataaatgcatatataacaatgttttgattgcccttgaacttccttgataatctggctaaTTATTCCTGCTAaata                                                                                                                            >  1:162881‑M1/125‑140 (MQ=255)
                  tATGCAAACTTAATTGCTGTTAAAGAAGGACATCAAGATGATAAGAAAATCAAAGCATTAATTGAAGTATTACAATCTAAAGATATTCAAGACTTCATTAATGAAAAATACAATGGTGCAGTTATTCCTGCTAAataata                                                                                                                         >  1:208681/1‑140 (MQ=255)
                     agggcataattttgaaacaaagggcaagggtatgaataataaattatcttgaaaattttataaatgcatatataacaatgttttgattgacgtcgcagatcgtttataatctggctaaTTATTCCTGCTAAATAATACCa                                                                                                                      <  2:305971‑M1/22‑1 (MQ=255)
                      gggcataattttgaaacaaagggcaagggtatgaataataaattatcttgaaaattttataaatgcatatataacaatgttttgattgcccttgaacttccttgataatctggctaaTTATTCCTGCTAAATAATACCaa                                                                                                                     <  1:302966‑M1/23‑1 (MQ=255)
                      gggcataattttgaaacaaagggcaagggtatgaataataaattatcttgaaaattttataaatgcatatataacaatgttttgattgcccttgaacttccttgataatctggctaaTTATTCCTGCTAAATAATACCaa                                                                                                                     <  1:145690‑M1/23‑1 (MQ=255)
                       ggcataattttgaaacaaagggcaagggtatgaataataaattatcttgaaaattttataaatgcatatataacaatgttttgattgcccttgaacttccttgataatctggctaaTTATTCCTGCTAAATAATACCAAt                                                                                                                    >  1:205062‑M1/117‑140 (MQ=255)
                       aaaaTTAATTGCTGTTAAAGAAGGACATCAAGATGATAAGAAAATCAAAGCATTAATTGAAGTATTACAATCTAAAGATATTCAAGACTTCATTAATGAAAAATACAATGGTGCAGTTATTCCTGCTAAATAATACCAAt                                                                                                                    <  1:118920/140‑1 (MQ=255)
                       aaaaTTAATTGATATTAAAGAAGGACAACAAGAAGATAAGAAAATCAAAGCATCAATTGAAGTATTACAATCTAAAGTTATTCAAGAAAAAAAAAAAAAAAAATACAATGGTGCAGTTATTCCTGCTAAATAATACCAAt                                                                                                                    <  2:13463/140‑1 (MQ=255)
                            tAATTGCTGTTAAAGAAGGACATCAAGATGATAAGAAAATCAAAGCATTAATTGAAGTATTACAATCTAAAGATATTCAAGACTTCATTAATGAAAAATACAATGGTGCAGTTATTCCTGCTAAATAATACCAATtaaat                                                                                                               <  1:232808/140‑1 (MQ=255)
                             attttgaaacaaagggcaagggtatgaataataaattatcttgaaaattttataaatgcatatataacaatgttttgattgcccttgaacttccttgataatctggctaaTTATTCCTGCTAAATAATACCAATtaaata                                                                                                              >  2:280448‑M1/111‑140 (MQ=255)
                               tgtgaaacaaagggcaagggtatgaataataaattatcttgaaaattttataaatgcatatataacaatgttttgattgcccttgaacttcctggctcctctgggtaaTTATTCCTGCTAAATAATACCAATtaaataaa                                                                                                            >  1:154054‑M1/109‑140 (MQ=255)
                                ttgtaacaaggtgcaagggtatgaataatatattatcttgaaaattttataaatgcatatataacaatgttttgattgcccttgaacttccttgataatctggctaaTTATTCCTGCTAAATAATACCAATTAAATaaaa                                                                                                           >  1:97580‑M1/108‑140 (MQ=255)
                                ttgaaacaaagggtaagggtatgaataataaattatcttgaaaattttataaatgcatatataacaatgttttgattgcccttgaacttccttgataatctggctaaTTATTCCTGCTAAATAATACCAATTAAATaaaa                                                                                                           >  1:141516‑M1/108‑140 (MQ=255)
                                 tgaaacaaagggcaagggtatgaataataaattatcttgaaaattttataaatgcatatataacaatgttttgattgcccttgaacttccttgataatctggctaaTTATTCCTGCTAAATAATACCAATTAAATaaaaa                                                                                                          >  1:67445‑M1/107‑140 (MQ=255)
                                 tgaaacaaagggcaagggtatgaataataaattatcttgaaaattttataaatgcatatataacaatgttttgattgcccttgaacttccttgataatctggctaaTTATTCCTGCTAAATAATACCAATTAAATaaaaa                                                                                                          >  2:270356‑M1/107‑140 (MQ=255)
                                 tgaaacaaagggcaagggtatgaataataaattatcttgaaaattttataaatgcatatataacaatgttttgattgcccttgaacttccttgataatctggctaaTTATTCCTGCTAAATAATACCAATTAAATaaaaa                                                                                                          >  2:5556‑M1/107‑140 (MQ=255)
                                   aaacaaagggcaagggtatgaataataaattatcttgaaaattttataaatgcatatataacaatgttttgattgcccttgaacttccttgataatctggctaaTTATTCCTGCTAAATAATACCAATTAAATAAAAATa                                                                                                        >  1:99364‑M1/105‑140 (MQ=255)
                                     ttAAAGAAGGACATCAAGATGATAAGTAAATCAAAGCATTAATTGAAGTTTTACAATCTAAAGATATTCAAGACTTCATTAATGAAAAATACAAGGGTGCAGTTATTCCTGCTAAATAATACCAATTAAATAAAAATAcc                                                                                                      <  1:56205/140‑1 (MQ=255)
                                          gggcaagggtatgaataataaattatcttgaaaattttataaatgcatatataacaatgttttgattgcccttgaacttccttgataatctggctaaTTATTCCTGCTAAATAATACCAATTAAATAAAAATACCCTTta                                                                                                 >  1:160026‑M1/98‑140 (MQ=255)
                                                  tCAAGATGATAAGAAAATCAAAGCATTAATTGAAGTATTACAATCTAAAGATATTCAAGACTTCATTAATGAAAAATACAATGGTGCAGTTATTCCTGCTAAATAATACCAATTAAATAAAAATACCCTTTAATaacaac                                                                                         <  2:302364/140‑1 (MQ=255)
                                                     tgaataataaattatcttgaaaattttataaatgcatatataacaatgttttgattgcccttgaacttccttgataatctggctaaTTATTCCTGCTAAATAATACCAATTAAATAAAAATACCCTTTAATAACAACGAt                                                                                      <  1:177329‑M1/54‑1 (MQ=255)
                                                         taataaattatcttgaaaattttataaatgcatatataacaatgttttgattgcccttgaacttccttgataatctggctaaTTATTCCTGCTAAATAATACCAATTAAATAAAAATACCCTTTAATAACAACGATTAAg                                                                                  <  2:297286‑M1/58‑1 (MQ=255)
                                                          aataaattatcttgaaaattttataaatgcacatataacaatgttttgattgcccttgaacttccttgataatctggctaaTTATTCCTGCTAAATAATACCAATTAAATAAAAATACCCTTTAATAACAACGATTAAgg                                                                                 >  1:214508‑M1/82‑140 (MQ=255)
                                                              aattatcttgaaaattttataaatgcatatataacaatgttttgattgcccttgaacttccttgataatctggctaaTTATTCCTGCTAAATAATACCAATTAAATAAAAATACCCTTTAATAACAACGATTAAGGGGtt                                                                             <  2:276527‑M1/63‑1 (MQ=255)
                                                                 tatcttgaaaattttataaatgcatatataacaatgttttgattgcccttgaacttccttgataatctggctaaTTATTCCTGCTAAATAATACCAATTAAATAAAAATACCCTTTAATAACAACGATTAAGGGGTTAtt                                                                          >  1:297422‑M1/75‑140 (MQ=255)
                                                                        gCATTAATTGAAGTATTACAATCTAAAGATATTCAAGACTTCATTAATGAAAAATACAATGGTGCAGTTATTCCTGCTAAATAATACCAATTAAATAAAAATACCCTTTAATAACAACGATTAAGGGGTTATTTTTGTgg                                                                   >  1:227845/1‑140 (MQ=255)
                                                                               tataaattcatatataactattttttgattgcccttgaacttcctttataatctggctaaTTATTCCTGCTAAATAATACCAATTAAATAAAAATACCCTTTAATAACAACTATTAAGTGGTTATTTTTGTGGTATTGaa                                                            >  1:141632‑M1/61‑140 (MQ=255)
                                                                               tataaatgcatatataacaatgttttgattgcccttgaacttccttgataatctggctaaTTATTCCTGCTAAATAATACCAATTAAATAAAAATACCCTTTAATAACAACGATTAAGGGGTTATTTTTGTGGTATTGaa                                                            >  1:22767‑M1/61‑140 (MQ=255)
                                                                                  aaatgcatatataacaatgttttgattgcccttgaacttccttgataatctggctaaTTATTCCTGCTAAATAATACCAATTAAATAAAAATACCCTTTAATAACAACGATTAAGGGGTTATTTTTGTGGTATTGAAAAt                                                         <  1:251219‑M1/83‑1 (MQ=255)
                                                                                     tgcatatataaaaatgttttgattgcccttgaacttccttgataatctggctaaTTATTCCTGATAAATAATACCCATTAAATACCAATACCTTTTACTAACAACGATTAAGGGTTTATTTTTTTGATATTTATAATaaa                                                      >  2:187278‑M1/55‑140 (MQ=255)
                                                                                           tataacaatgttttgattgcccttgaactgccgtgataatctggctaaTTATTCCTGCTAAATAATACCAATTAAATAAAAATACCCTTTAATAACAACGATTAAGGGGTTATTTTTGTGGTATTGAAAATAAAAAAggg                                                >  1:263162‑M1/49‑140 (MQ=255)
                                                                                           tataacaatgttttgatggcccttgaacttccttgataatctggctaaTTATTCCTGCTAAATAATACCAATTAAATAAAAATACCCTTTAATAACAACGATTAAGGGGTTATTTTTGTGGTATTGAAAATAAAAAAggg                                                >  1:263225‑M1/49‑140 (MQ=255)
                                                                                              atcaatgttttgattacccttgaacttcgtgtataacttggctaaTTATTCTTGATAAAGAATACAAATTAAATAAAAATACCCTTTAATTACAACGATTAAGGGGTTATTTTTGTGGTATTGAAAATAAAAAAGGGcac                                             >  2:209381‑M1/46‑140 (MQ=255)
                                                                                              aacaattttttgattgcccttgaacttccttgataatctttctaaTTATTCCTGCTAAATAATACTAATTAAATAAAAATACCCGTTAATAATAACTATGAAGGGGTTATTTTTGTTGTATTGAAAATAAAAAAGGGcac                                             >  2:9134‑M1/46‑140 (MQ=255)
                                                                                              aacaatgttttgattgcccttgaactttcttgataatctggctaaTTATTCCTGCTAAATAATACCAATTAAATAAAAATACCCTTTAATAACAACGATTAAGGGGTTATTTTTGTGGTATTGAAAATAAAAAAGGGcac                                             >  2:132494‑M1/46‑140 (MQ=255)
                                                                                               acaatgttttgattgcccttgaacttccttgataatctggctaaTTATTCCTGCTAAATAATACCAATTAAATAAAAATACCCTTTAATAACAACGATTAAGGGGTTATTTTTGTGGTATTGAAAATAAAAAAGGGcaca                                            >  2:166077‑M1/45‑140 (MQ=255)
                                                                                                caatgttttgcttgcccttgaacttccttcataatctggctaaTTATTCGTGCTAAATAATACCAATTAAATAAAAATACCCTTTAATAACAACGATTAAGGGGTTATTTTTGTGGTATTGAAAATAAAAAAGGGCACaa                                           >  2:209275‑M1/44‑140 (MQ=255)
                                                                                                caatgttttgattgcccttgaacttccttgataatctggctaaTTATTCCTGCTAAATAATACCAATTAAATAAAAATACCCTTTAATAACAACGATTAAGGGGTTATTTTTGTGGTATTGAAAATAAAAAAGGGCACaa                                           <  2:103777‑M1/97‑1 (MQ=255)
                                                                                                aaatgttttgattcgccttgaacttccttgataatccgtgtaaTTAGTACTGCTAAATAATACCAATTAAAAAAAAATACCCTTTAATAAAAACGATTAAGGGGTTATTTTTGTGGTATTGAAAATAAAAAAGGGCACaa                                           >  2:92674‑M1/44‑140 (MQ=255)
                                                                                                  atgttttgattgcccttgaacttccttgataagctggctaaTTATTCCTGATGAATAAGACCAATTAAATAAAAATACCCTTTAATAACAACGATTAAGGGGTTATTTTTGTGGTATTGAAAATAAAAAAGGGCACaaaa                                         >  1:299677‑M1/42‑140 (MQ=255)
                                                                                                    gttttgattgcccttgaacttccttgataatctggctaaTTATTCCTGCTAAATAATACCAATTAAATAAAAATACCCTTTAATAACAACAATAAAGGGGTTATTTTGAGGGTATTGAAAATAAAAAAGGgcaaaaacgg                                       <  2:16077‑M1/101‑4 (MQ=255)
                                                                                                       ttgattgcccttgaacttccttgataatctggctaaTTATTCCTGCTAAATAATACCAATTAAATAAAAATACCCTTTAATAAGAAAGATTAAGGGGTTATTTTTTTTCTATTgaaaataacaaagggactaaaaagaga                                    <  1:21905‑M1/104‑13 (MQ=255)
                                                                                                       ttgattgcccttgaacttccttgataatctggctaaTTATTCCTGCTAAATAATACCAATTAAATAAAAATACCCTTTAATAACAACGATTAAGGGGTTATTTTTGTGGTATTGAAAATAAAAAAGGGCACAAAagggga                                    <  2:318642‑M1/104‑2 (MQ=255)
                                                                                                        tgattgcccttgaacttccttgataatctggctaaTTATTCCTGCTAAATAATACCAATTAAATAAAAATACCCTTTAATAACAACGATTAAGGGGTTATTTTTGTGGTATTGAAAATAAAAAAGGGCACAAaaggggaa                                   <  2:190399‑M1/105‑3 (MQ=255)
                                                                                                        tgattgcccttgaacttccttgataatctggctaaTTATTCCTGCTAAATAATACCAATTAAATAAAAATACCCTTTAATAACAACGATTAAGGGGTTATTTTTGTGGTATTGAAAATAAAAAAGGGCACAAAAGGGGCa                                   <  2:14610‑M1/105‑1 (MQ=255)
                                                                                                         gattgcccttgaacttccttgataatctggctaaTTATTCCTGCTAAATAATACCAATTAAATAAAAATACCCTTTAATAACAACGATTAAGGGGTTATTTTTGTGGTATTGAAAATAAAAAAGGGCACAAAAGGGGCAg                                  <  2:226704‑M1/106‑1 (MQ=255)
                                                                                                          attgcccttgaacttccttgataatctggctaaTTATTCCTGCTAAATAATACCAATTAAATAAAAATACCCTTTAATAACAACGATTAAGGGGTTATTTTTGTGGTATTGAAAATAAAAAAGGGAACAAAAGGGGCagg                                 <  2:59753‑M1/107‑2 (MQ=255)
                                                                                                              cccttgaacttccttgataatctggctatTTATTCCTGCTAAATAATACCAATTAAATAAAAATACCCTTTAATAACAACGATTAAGGGGTTATTTTTGTGGTATTGAAAATAAAAAAGGGCACAAAAGGGGCAGTatat                             >  2:265239‑M1/30‑140 (MQ=255)
                                                                                                              cccttgaacttccttgataatctggctaaTTATTCCTGCTAAATAATACCAATTAAATAAAAATACCCTTTAATAACAACGATTAAGGGGTTATTTTTGTGGTATTGAAAATAAAAAAGGGCACAAAAGGGGCAGTatat                             <  1:257469‑M1/111‑1 (MQ=255)
                                                                                                                cttgaacttccttgataatctggctaaTTATTCCTGCTAAATAATACCAATTAAATAAAAATACCCTTTAATAACAACGATTAAGGGGTTATTTTTGTGGTATTGAAAATAAAAAAGGGCACAAAAGGGGCAgtatatcc                           <  2:231081‑M1/113‑3 (MQ=255)
                                                                                                                 ttgaacttccttgataatctggctaaTTATTCCTGCTAAATAATACCAATTAAATAAAAATACCCTTTAATAACAACGATTAAGGGGTTATTTTTGTGGTATTGAAATTAAAAAAGGGCACAAAAGgggcagtaaattca                          <  1:24838‑M1/114‑7 (MQ=255)
                                                                                                                      aTGAAAAATACAATGGTGCAGTTATTCCTGCTAAATAATACCAATTAAATAAAAATACCCTTTAATCACAACGATTAAGGGGTTATTTTTGTGGTATTGAAAATAAAAAAGGGCACAAAAGAGGCAGTAAAAGCaaaaaa                     >  1:44044/1‑137 (MQ=255)
                                                                                                                       tGAAAAATACAATGGTGCAGTTATTCCTGCTAAATAATACCAATTAAATAACAATACCCTTTAATAACAACGATTAAGGGGTTATTTTTGTGGTATTGAAATTAATTAATGGCTTGAGAGGTGCAGTATATGCATAtttt                    >  1:26907/1‑138 (MQ=255)
                                                                                                                           ttgataatctggctaaTTATTCCTGCTAAATAATACCAATTAAATAAAAATACCCTTTAATAACAACGATTAAGGGGTTATTTTTGTGGTATTGAAAATAAAAAAGGGCACAAAAGGGGCAGTATATGCAAATTATCGaa                <  2:268517‑M1/124‑1 (MQ=255)
                                                                                                                            aaTACAATGGTGCAGTTATTCCTGCTAAATAATGCCAATTAAATAAAAATAGCCTTTAATAACAGCGATTAAGGGGTAATGGTTGTGGTATGGAAAATAAAAAAGGGCACAAAAGGGGCAGTATATGCAAATTATCGAAt               >  2:80794/1‑140 (MQ=255)
                                                                                                                                  tctggctaaTTATTCCTGCTAAATAATACCAATTAAATAAAAATACCCTTTAATAACAACGATTAAGGGGTTATTTTTGTGGTATTGAAAATAAAAAAGGGCACAAAAGGGGCAGTATATGCAAATTATCGAATTTTaaa         >  1:276527‑M1/10‑140 (MQ=255)
                                                                                                                                      gctaaTTATTCCTGCTAAATAATACCAATTAAATAAAAATACCCTTTAATAACAACGATTAAGGGGTTATTTTTGTGGTATTGAAAATAAAAAAGGGCACAAAAGGGGCAGTATATGCAAATTATCGAATTTTAAACaaa     <  2:120201‑M1/135‑1 (MQ=255)
                                                                                                                                        taaTTATTCCTGCGAAATAATACCAATTAAATAAAAATACCCTTTAATAACAACGATTACGGGGTTATTTTTGTGGTACTTAAAATAAAAAAGGGCACAAAAGGGGCAGTATATGCAAATTATCGaattttaaaaacaaa   <  2:111368‑M1/137‑7 (MQ=255)
                                                                                                                                         aGTTATTCCTGCTAAATAATACCAAGTAAATAAAAATACCCTTTAATAACAGCGATTAAGGGGTTATTTTTGTGGTATTGAAAATAGAAAAGGACGCAACAGGGGCAGTATGTGCTAGTTATCGAATTTTAAAAcaaaaa  >  2:164914/1‑140 (MQ=255)
                                                                                                                                           |                                                                                                                                         
AGTGCGAAAGATAATCCTTATGCAAACTTAATTGCTGTTAAAGAAGGACATCAAGATGATAAGAAAATCAAAGCATTAATTGAAGTATTACAATCTAAAGATATTCAAGACTTCATTAATGAAAAATACAATGGTGCAGTTATTCCTGCTAAATAATACCAATTAAATAAAAATACCCTTTAATAACAACGATTAAGGGGTTATTTTTGTGGTATTGAAAATAAAAAAGGGCACAAAAGGGGCAGTATATGCAAATTATCGAATTTTAAACAAAAAA  >  CP000730/895646‑895922

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.