New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP000730 2082368 =82 (1.260)3 (0.050) 3/238 NT 3.9% intergenic (+9/+616) USA300HOU_1940/mapW2 aminotransferase/cell surface protein MapW2
?CP000730 2082406 = 73 (1.230)intergenic (+47/+578) USA300HOU_1940/mapW2 aminotransferase/cell surface protein MapW2

AACAGATATTCGTATTGCGTTTAGCTGTGTAGAAAAAGAAGATATCCCACATGTATTTGATTCAATTGCTAAAGCGATTGATGACTTAAGATAATTAATTTCAACCAATAATCTGATGAGTATGACTCGGATTATTGGTTTTTTATTTTTAAAATTATTCCTTCTTTCAAAGTATCATAAGATATATTTTATTCAGCAACTTGTCAAACACTATACCTAATTAGTTTTATACATCTCTCCTAACAAAATCAAAAAATCGGACAGATGAAAAGTAAAA  >  CP000730/2082266‑2082542
                                                                                                                                            |                                                                                                                                        
aaCAGATATTCGTATTGCGTTTAGCTGTGTAGAAAAAGAAGATATCCCACATGTATTTGATTCAATTGCTAAAGCGATTGATGACTTAAGATAATTAATTTCAACCAATAATCTGATGAGTATGACTCGGATTATTGGttt                                                                                                                                          >  2:354091/1‑141 (MQ=255)
 agtgATATTCATCTTGAGTTAAGTTGTGTAGAAAAAGAAGATATCCCACATGTATTTGATTCAATTGCTAAAGCGATTGATGACTTAAGATAATTAATTTCAACCAATAATCTGATGAGTATGTCTCGGATTATTGGtttt                                                                                                                                         <  2:749438/138‑1 (MQ=255)
  cAGATATTCGTATTGCGTTTAGCTGTGTAGAAAAAGAAGATATCCCACATGTATTTGATTCAATTGCTAAAGCGATTGATGACTTAAGATAATTAATTTCAATCAATAATCTGATGAGTATTACGCGGATTATTGGttttt                                                                                                                                        <  1:431784/141‑1 (MQ=255)
       atTCGTATTGCGTTTAGCTGTGTAGAAAAAGAAGATATCCCACATGTATTTGATTCAATTGCTAAAGCGATTGATGACTTAAGATAATTAATTTCAACCAATAATCTGATGAGTATGACTCGGATTATTGGTtttttattt                                                                                                                                   <  1:554767/141‑1 (MQ=255)
       atTCGTATTCCGTTTAGCTGTGTAGAAAAAGAAGATATCCCACATGTATTTGATTCAATTGCTAAAGCGATTGATGACTTAAGATAATTAATTTCAACCAATAATCTGATGAGTATGACTCGGATTATTGGTtttttattt                                                                                                                                   >  2:733059/1‑141 (MQ=255)
         tCGTATTGCGTTTAGCTGTGTAGAAAAAGAAGATATTCCACATGTATTTGATTCAATTGCTAAAGCGATTGATGACTTAAGATAATTAATTTCAACCAATAATCTGATGAGTATGACTCGGATTATTGGTtttttattttt                                                                                                                                 <  1:419448/141‑1 (MQ=255)
         tCGTAATTCGGTTAGCTGTGTAGAAAAAGAAGATATCCCACCTGTATTTGATTCAATTGCTAAAGCGATTGATGACTTAAGATAATTAATTTCAACCAATAATCTGATGAGTATGACTCGGATTATTGGTtttttattttt                                                                                                                                 <  1:52249/141‑1 (MQ=255)
          cGTATTGCGTTTAGCTGTGTAGAAAAAGAAGATATCCCACATGTATTTGATTCAATTGCTAAAGCGATTGATGACTTAAGATAATTAATTTCAACCAATAATCTGATGAGTATGACTCGGATTATTGGTtttttattttta                                                                                                                                <  2:446332/141‑1 (MQ=255)
           gTATTGCGTTTAGCTGTGTAGAAAAAGAAGATATCCCACATGTATTTGATTCAATTGCTAAAGCGATTGATGACTTAAGATAATTAATTTCAACCAATAATCTGATGAGTATGACTCGGATTATTGGTTTTTTATTTTTaa                                                                                                                               <  1:445815/141‑1 (MQ=255)
           gTATTGCGTTTAGCTGTGTAGAAAAAGAAGATATCCCACATGTATTTGATTCAATTGCTAAAGCGATTGATGACTTAAGAGAATTAATTTCAACCAATAATCTGATGAGTATGACTCGGATTATTGGTTTTTTATTTTTaa                                                                                                                               <  1:226544/141‑1 (MQ=255)
                 cGTTTAGCTGTGTAGAAAAAGAAGATATCCCACATGTATTTGATTCAATTGCTAAAGCGATTGATGACTTAAGATAATTAATTTCAACCAATAATCTGATGAGTATGACTCGGATTATTGGTTTTTTATTTTTAAAattat                                                                                                                         <  1:602215/141‑1 (MQ=255)
                 cGTTTAGCTGTGTAGAAAAAGAAGATATCCCACATGTATTTGATTCAATTGCTAAAGCGATTGATGACTTAAGATAATTAATTTCAACCAATAATCTGATGAGTATGACTCCGATTATTGGTTTTTTATTTTTAAAattat                                                                                                                         >  1:15678/1‑141 (MQ=255)
                     tAGCTGTGTAGAAAAAGAAGATATTCTAAATGTATTTGATTCAATTGCTAAAGCGATTGATGACTTAAGATAATTAATTTCAACCAATAATCTGATGAGTATGACTCGGATTATTGGTTTTTTATTTTTAAAATTATTCct                                                                                                                     <  2:697009/141‑1 (MQ=255)
                     tAGCTGTGTAGAAAAAGAAGATATCCCACATGTATTTGATTCAATTGCTAAAGCGATTGATGACTTAAGATAATTAATTTCAACCAATAATCTGATGAGTATGACTCGGATTATTGGTTTTTTATTTTTAAAATTATTCct                                                                                                                     >  1:196939/1‑141 (MQ=255)
                     tAGCTGTGTAGAAAAAGAAGATATCCCACATGTATTTGATTCAATTGCTAAAGCGATTGATGACTTAAGATAATTAATTTCAACCAATAATCTGATGAGTATGACTCGGATTATTGGTTTTTTATTTTTAAAATTATTCct                                                                                                                     <  1:477275/141‑1 (MQ=255)
                     tAGCTGTGTAGAAAAAGAAGATATCCCACATGTATTTGATTCAATTGCTAAAGCGATTGATGACTTAAGATAATTAATTTCAACCAATAATCTGATGAGTATCACTCGGATTATTGCTTTTTTATTTTTAAAATTATTCct                                                                                                                     <  1:496958/141‑1 (MQ=255)
                      aGCTGTGTAGAAAAAGAAGATATCCCACATGTATTTGATTCAATTGCTAAAGCGATTGATGACTTAAGATAATTAATTTCAACCAATAATCTGATGAGTATGACTCGGATTATTGGTTTTTTATTTTTAAAATTATTCctt                                                                                                                    >  1:228322/1‑141 (MQ=255)
                       gCTGTGTAGAAAAAGAAGATATCCCACATGTATTTGATTCAATTGCTAAAGCGATTGATGACTTAAGATAATTAATTTCAACCATTAATCTGATGAGTATGGCTCGGATTATTGGTTTTTTATTTTTAAAATTATTCcttc                                                                                                                   >  1:225769/1‑141 (MQ=255)
                       gCTGTGTAGAAAAAGAAGATATCCCACATGTATTTGATTCAATTGCTAAAGCGATTGATGACTTAAGATAATTAATTTCAACCAATAATCTGATGAGTATGACTCGGATTATTGGTTTTTTATTTTTAAAATTATTCcttc                                                                                                                   <  1:88225/141‑1 (MQ=255)
                       gCTGTGTAGAAAAAGAAGATATCCCACATGTATTTGATTCAATTGCTAAAGCGATTGATGACTTAAGATAATTAATTTCAACCAATAATCTGATGAGTATGACTCGGATTATTGGTTTTTTATTTTTAAAATTATTCcttc                                                                                                                   >  1:262394/1‑141 (MQ=255)
                         ggtatagtgtttgacaagttgctgaataaaatatatcttatgatcctttgaaagtaggaataattttaaaaatacaaAACCAATAATATGATGAGTTAGACATGGATGAAATGTTTTTAATTTTTAAAATTATTCcttctt                                                                                                                 <  2:644933‑M1/64‑1 (MQ=255)
                          gtgtAGAAAAAGAAGATATCCCACATGTATTTGATTCAATTGCTAAAGCGATTGATGACTTAAGATAATTAATTTCAACCAATAATCTGATGAGTATGACTCGGATTATTGGTTTTTTATTTTTAAAATTATTCCTTCttt                                                                                                                >  1:665548/1‑141 (MQ=255)
                          gtgtAGAAAAAGAAGATATCCCACATGTATTTGATTCAATTGCTAAAGCGATTGATGACTTAAGATAATTAATTTCAACCAATAATCTGATGAGTATGACTCGGATTATTGGTTTTTTATTTTTAAAATTATTCCTTCttt                                                                                                                >  1:419664/1‑141 (MQ=255)
                           tgtAGAAAAAGAAGCTATCCCAAATGTATTTGATTCAATTGCTAAAGCGATTGATGACTTAAGATAATTAATTTCAACCAAGAATCTGATGAGTATGCCTCGGATTATTGGTTTTTTATTTTTAAAATTATTCCTTCTTTc                                                                                                               <  1:202188/141‑1 (MQ=255)
                           tgtAGAAAAAGAAGATATCCCACATGTATTTGATTCAATTGCTAAAGCGATTGATGACTTAAGATAATTAATTTCAACCAATAATCTGATGAGTATGACTCGGATTATTGGTTTTTTATTTTTAAAATTATTCCTTCTTTc                                                                                                               <  1:36839/141‑1 (MQ=255)
                           tggagtaaaaGAAGCTATGCCGCATGTATTTGATTCGATTGCTAAAGCGATTGATGACTTAAGATAATTAATTTCAACCATTAATCTGATGAGTATGACTCGGATTATTGGTTTTTTATTTTTAAAATTATTCCTTCTTTc                                                                                                               <  2:714364/135‑1 (MQ=255)
                           tatagtgtttgacaagttgctgaataaaatatatcttatgatactttgaaagaatgaataattttaaaaataaaaaaccaataatccgcggcatactcatcagatgatgagtaTTTTATGTTTAAAATAATAGCTTCTTTc                                                                                                               >  1:92474‑M2/114‑141 (MQ=255)
                           tatagtgtttgacaagttgctgaataaaatatatcttatgatactttgaaagaaggaataattttaaaaataaaaaaccaataatctgatgagtatgactcggattattggttTTTTATTTTTAAAATTATTCCTTctttt                                                                                                               >  2:92474‑M2/114‑140 (MQ=255)
                            gtAGAAAAAGAAGATATCCCACCTGGATATCACTCAATTGCTAAAGCGATTGATGACTTAAGATAATTACTTTCAACCAATAATCTGATGAGTATGACGCGGATTATTGGTTTTTCATTTTTAAAATTATTGCTTCTTTCa                                                                                                              <  2:348649/141‑1 (MQ=255)
                               gAAAAAGAAGATATCCCACATGTATTTGATTCAATTGCTAACGCGATTGATGACTTAAGATAATTAATTTCCACCAATAATCTGATGAGTATGACTCGGATTATTGGTTTTTTATTTTTAAAATTATTCCTTCTTTCAAAg                                                                                                           <  2:1637/141‑1 (MQ=255)
                                 aaaaGAAGATATCCCACATGTATTTGATTCAATTGCTAAAGCGATTGATGACTTAAGATAATTAATTTCAACCAATAATCTGATGAGTATGACTCGGATTATTGGTTTTTTATTTTTAAAATTATTCCTTCTTTCAAAGTa                                                                                                         <  2:95516/141‑1 (MQ=255)
                                   aagaagATATCCCACATGTATTTGATTCAATTGCTAAAGCGATTGATGACTTAAGATAATTAATTTCAACCAATAATCTGATGAGTATGACTCGGATTATTGGTTTTTTATTTTTAAAATTATTCCTTCTTTCAAAGTATc                                                                                                       >  1:427513/1‑141 (MQ=255)
                                   aagaagATATCCCACATGTATTTGATTCAATTGCTAAAGCGATTGATGACTTAAGATAATTAATTTCAACCAATAATCTGATGAGTATGACTCGGATTATTGGTTTTTTATTTTTAAAATTATTCCTTCTTTCAAAGTATc                                                                                                       >  1:32530/1‑141 (MQ=255)
                                     gccggtctcgcagaTGTATTTGATTCAATTGCTAAGGCGATTGAGGCCTCATGTTCGTTAATTTCCACCACTAATCTGATGAGTATGACTCGAATTAGTGCTTTTTGGTTTTTAATATTATTCCTTCTTTCTACGTATCAt                                                                                                     >  2:284373/14‑141 (MQ=255)
                                     gaagaTATCCCACATGTATTTGATTCAATTGCTAAAGCGATTGATGACTTAAGATAATTAATTTCAACCAATAATCTGATGAGTATGACTCGGATTATTGGTTTTTTATTTTTAAAATTATTCCTTCTTTCAAAGTATCAt                                                                                                     >  2:111592/1‑141 (MQ=255)
                                     gaagaTATCCCACATGTATTTGATTCAATTGCTAAAGCGATTGATGACTTAAGATAATTAATTTCAACCAATAATCTGATGAGTATGACTCGGATTATTGGTTTTTTATTTTTAAAATTATTCCTTCTTTCAAAGTATCAt                                                                                                     >  1:475302/1‑141 (MQ=255)
                                      aagaTATCCCACATGTATTTGATTCAATTGCTAAAGCGATTGATGACTTAAGATAATTAATTTCAACCAATAATCTGATGAGTATGACTCGGATTATTGGTTTTTTATTTTTAAAATTATTCCTTCTTTCAAAGTATCATa                                                                                                    <  1:654391/141‑1 (MQ=255)
                                          tatCCCACATGTATTTGATTCAATTGCTAAAGCGATTGATGACTTAAGATAATTAATTTCAACCAATAATCTGATGAGTATGACTCGGATTATTGGTTTTTTATTTTTAAAATTATTCCTTCTTTCAAAGTATCATAAGat                                                                                                >  1:79757/1‑141 (MQ=255)
                                           atCCCACATGTATTTGATTCAATTGATAGTGCCATTGATGACTTAAGATAATTAATTTCAACCAATAATCTGATGAGTATGACTCGGATTATTGGTTTTTTATTTTTTAAATTATTCTTTCTTTCAAAGTGTCGTTAGatt                                                                                               >  2:710812/1‑140 (MQ=255)
                                            tCCCACATGTATTTGATTCAATTGCTAAAGCGAATGATGACTTAAGATAATTAATTTCAACCAATAATCTGATGAGTATGACTCGGATTATTGGTTTTTTATTTTTAAAATTATTCCTTCTTTCAAAGTATCATAAGatat                                                                                              >  2:512349/1‑141 (MQ=255)
                                              ctccaTGTATTGGAGTCAATGGCTAAAGCGATTGATGACTTAAGATAATTAATTCCAACCTATAATCTGATGAGTATGTCCCGGATTATTGGGTTTTTATTTTTAAAATTATTCCTTCTTTCAAAGTATCATAAGatatat                                                                                            <  1:340085/138‑1 (MQ=255)
                                                acaTGTATGTGATTCAATTGCTAAAGCGATTGATGACTTAAGATAATTAATTTCAACCAATAATCTGATGAGTATGACTCGGATTATTGGTTTTTTATTTTTAAAATTATTCCTTCTTTCAAAGTATCATAAGATATAttt                                                                                          <  2:121724/141‑1 (MQ=255)
                                                    gTATTTGATTCAATTGCTAAAGCGATGGATGACTTAAGATAATTAATTTCAACCAATAATCTGATGAGTATGACTCGGATTATTGGTTTTTTATTTTTAAAATTATTCCTTCTTTCAAAGTATCATAAGATATATTTTAtt                                                                                      >  1:405039/1‑141 (MQ=255)
                                                       tctGATTCAATTGCTAAAGCGATTGATGACTTAAGATAATTAATTTCAACCAATAATCTGATGAGTATGACTCGGATTATTGGTTTTTTATTTTTAAAATTATTCCTTCTTTCAAAGTATCATAAGATATGCTTTATTCAg                                                                                   <  1:566850/139‑1 (MQ=255)
                                                            ttCAATTGCTAAAGCGATTGATGACTTAAGATAATTAATTTCAACCAATAATCTGATGAGTATGACTCGGATTATTGGTTTTTTATTTTTAAAATTATTCCTTCTTTCAAAGTATCATAAGATATATTTTATTCAGCAACt                                                                              <  2:673681/141‑1 (MQ=255)
                                                             tCAATTGCTAAAGCGATTGATGACTTAAGATAATTATTTTCAACCAATAATCTGATGAGTATGACTCGGATTATTGGTTTTTTATTTTTAAAATTATTCCTTCTTTCAAAGTATCATAAGATATATTTTATTCAGCAACtt                                                                             <  1:196618/141‑1 (MQ=255)
                                                             tCAATTGCTAAAGCGATTGATGACTTAAGATAATTAATTTCAACCAATAATCTGATGAGTATGACTCGGATTATTGGTTTTTTATTTTTAAAATTATTCCTTCTTTCAAAGTATCATAAGATATATTTTATTCAGCAACtt                                                                             <  1:26077/141‑1 (MQ=255)
                                                               aaTTGCTAAAGCGATTGATGACTTAAGATAATTAATTTCAACCAATAATCTGATGAGTATGACTCGGATTATTGGTTTTTTATTTTTAAAATTATTCCTTCTTTCAAAGTATCATAAGATATATTTTATTCAGCAACTTGt                                                                           <  1:267519/141‑1 (MQ=255)
                                                               aaTTGCTAAAGCGATTGATGACTTAAGATAATTAATTTCAACCAATAATCTGATGAGTATGACTCGGATTATTGGTTTTTTATTTTTAAAATTATTCCTTCTTTCAAAGTATCATAAGATATATTTTATTCAGCAACTTGt                                                                           <  2:665339/141‑1 (MQ=255)
                                                                   gCTAAAGCGATTGATGACTTAAGATAATTAATTTCAACCAATAATCTGATGAGTATGACTCGGATTATTGGTTTTTTATTTTTAAAATTATTCCTTCTTTCAAAGTATCATAAGATATATTTTATTCAGCAACTTGTCaaa                                                                       <  1:188534/141‑1 (MQ=255)
                                                                    cTAAAGCGATTGATGACTTAAGATAATTAATTTCAACCAATAATCTGATGAGTATGACTCGGATTATTGGTTTTTTATTTTTAAAATTATTCCTTCTTTCAAAGTAACATAAACTCTTTTTTATTCACCACCTTGTCaaaa                                                                      >  1:231413/1‑140 (MQ=255)
                                                                     tAAAGCGATTGATGACTTAAGATAATTAATTTCAACCAATAATCTGATGAGTATGACTCGGATTATTGGTTTTTTATTTTTAAAATTATTCCTTCTTTCAAAGTATCATAAGATATATTTTATTCAGCAACTTGTCagaaa                                                                     >  1:253438/1‑137 (MQ=255)
                                                                      aaaGCGATTGATGACTTAAGATAATTAATTTCAACCAATAATCTGATGAGTATGACTCGGATTATTGGTTTTTTATTTTTAAAATTATTCCTTCTTTCAAAGTATCATAAGATATATTTTATTCAGCGACTTGTCAAacac                                                                    >  1:290230/1‑141 (MQ=255)
                                                                      aaaGCGATTGATGACTTAAGATAATTAATTTCAACCAATAATCTGATGAGTATGACTCGGATTATTGGTTTTTTATTTTTAAAATTATTCCTTCTTTCAAAGTATCATAAGATATATTTTATTCAGCAACTTGTCAAacat                                                                    >  2:419819/1‑140 (MQ=255)
                                                                        aGCGATTGATGACTTAAGATAATTAATTTCAACCAATAATCTGATGAGTATGACTCGGATTATTGGTTTTTTATTTTTAAAATTATTCCTTCTTTCAAAGTATCATAAGATATATTTTATTCGTCAACTTGTCAAAAACta                                                                  >  2:376744/1‑141 (MQ=255)
                                                                          gaaagaagctattattttaaacataaaaTACTCATCATCTGATGAGTATGCCGCGGATTATTGGTTTTTTATTTTTAAAATTATTCATTCTTTCAAAGTATCATAAGATATATTTTATTCAGCAACTTGTCAAACACtata                                                                >  1:92474‑M1/29‑141 (MQ=255)
                                                                          cGATTGATGACTTAAGATAATTAATTTCAACCAATAATCTGATGAGTATGACTCGGATTATTGGTTTTTTATTTTTAAAATTATTCCTTCTTTCAAAGTATCATAAGATATATTTTATTCAGCAACTTGTCAAACACtata                                                                <  2:393239/141‑1 (MQ=255)
                                                                          aaaagaaggaataattttaaaaataaaaAACCAATAATCCGAGTCATACTCATCAGATTATTGGTTTTTTATTTTTAAAATTATTCCTTCTTTCAAAGTATCATAAGATATATTTTATTCAGCAACTTGTCAAACACtata                                                                >  2:92474‑M1/29‑141 (MQ=255)
                                                                            aagaaggaataattttaaaaattaaaaacatttcatccatgtctaactcatcatattattggttTTGTATTTTTAAAATTATTCCTACTTTCAAAGGATCATAAGATATATTTTATTCAGCAACTTGTCAAACACTATAcc                                                              <  2:644933‑M2/77‑1 (MQ=255)
                                                                            aTTGATGACTTAAGATAATTAATTTCAACCAATAATCTGATGAGTATGACTCGGATTATTGGTTTTTTATTTTTAAAATTATTCCTTCTTTCAAAGTATCATAAGATATATTTTATTCAGCAACTTGTCAAACACTATAcc                                                              <  1:741621/141‑1 (MQ=255)
                                                                             ttGATGACTTAAGATAATTAATTTCAACCAATAATCTGATGAGTATGACTCGGATTATTGGTTTTTTATTTTTAAAATTATTCCTTCTTTCAAAGTATCATAAGATATATTTTATTCAGCAACTTGTCAAACACTATACCt                                                             >  1:674025/1‑141 (MQ=255)
                                                                             ttGATGACTTAAGATAATTAATTTCAACCAATAATCTGATGAGTATGACTCGGATTATTGGTTTTTTATTTTTAAAATTATTCCTTCTTTCAAAGTATCATAAGATATATTTTATTCAGCAACTTGTCAAACACTATACCt                                                             >  2:721251/1‑141 (MQ=255)
                                                                              tgatgaCTTAAGATAATTAATTTCAACCAATAATCTGATGAGTATGACTCGGATTATTGGTTTTTTATTTTTAAAATTATTCCTTCTTTCAAAGTATCATAAGATATATTTTATTCAGCAACTTTTTCAACACTATACCTa                                                            >  2:392011/1‑141 (MQ=255)
                                                                                atgaCTTAAGATAATTAATTTCAACCAATAATCTGATGAGTATGACTCGGATTATTGGTTTTTTATTTTTAAAATTATTCATTCTTTCAAAGTATCATAAGATATATTTTATTCAGGAACTTGTTAAAGATAATACCTAAt                                                          >  1:58462/1‑141 (MQ=255)
                                                                                 tgaCTTAAGATAATTAATTTCAACCAATAATCTGATGAGTATGACTCGGATTATTGGTTTTTTATTTTTAAAATTATTCCTTCTTTCAAAGTATCATAAGATATATTTTATTCAGCAACTTGTCAAACACTATACCTAAtt                                                         <  2:742704/141‑1 (MQ=255)
                                                                                    cTTAAGATAATTAATTTCAACCAATAATCTGATGAGTATGACTCGGATTATTGGTTTTTTATTTTTAAAATTATTCCTTCTTTCAAAGTATCATAAGATATATTTTATTCAGCAACTTGTCAAACACTATACCTAATTAGt                                                      <  1:512349/141‑1 (MQ=255)
                                                                                     ttAAGATAATTAATTTCAACCAATAATCTGATGAGTATGACTCGGTTTATTGGTTTTTTATTTTTATAATTATTTCTTCTTTCAAAGTATCATTAGATTTATTTTATTTTGCAACTTGTCAAACACTATACCTAATTAGtt                                                     >  2:65363/1‑141 (MQ=255)
                                                                                         gATAATTAATTTCAACCAATAATCTGATGAGTATGACTCGGATTATTGGTTTTTTATTTTTAAAATTATTCCTTCTTTCAAAGTATCATAAGATATATTTTATTCAGCAACTTGTCAAACACTATACCTAATTAGTTTtat                                                 <  2:79757/141‑1 (MQ=255)
                                                                                           taattaatTTCAACCAATAATCTGATGAGTATGACTCGGATTATTGGTTTTTTATTTTTAAAATTATTCCTTCTTTCAAAGTATCATAAGATATATTTTATTCAGCAACTTGTCAAACACTATACATAATTAGTTTtattc                                               >  2:773796/1‑139 (MQ=255)
                                                                                                aattTCAACCAATAATCTGATGAGTATGACTCGGATTATTGGTTTTTTATTTTTAAAATTATTCCTTCTTTCAAAGTATCATAAGATATATTTTATTCAGCAACTTGTCAAACACTATACCTAATTAGTTTTATACAtctc                                          >  2:639425/1‑141 (MQ=255)
                                                                                                 attTCAACCAATAATCTGATGAGTATGACTCGGCTTATTGGTTTTTTATTTTTAAAATTATTCCTTCTTTCAAAGTATCATAAGATATATTTTATTCTGCAACTTGTTAAACACTATACCTAATTAATTCTCTACAtccta                                         >  2:125731/1‑138 (MQ=255)
                                                                                                  tttCAACCAATAATCTGATGAGTATGACTCGGATTATTGGTTTTTTATTTTTAAAATTATTCCTTCTTTCAAAGTATCATAAGATATATTTTATTCAGCAACTTGTCAAACACTATACCTAATTAGTTTTATACAtctctc                                        <  2:759531/141‑1 (MQ=255)
                                                                                                  tttCAACCAATAATCTGATGAGTATGACTCGGATTATTGGTTTTTTATTTTTAAAATTATTCCTTCTTTCAAAGTATCATAAGATATATTTTATTCAGCAACTTGTCAAACACTATACCTAATTAGTTTTATACAtctctc                                        >  2:494558/1‑141 (MQ=255)
                                                                                                  gagcAACCATTTACCTTATGAGTATGACTCTGATTATTGGTGTTTTATTGTTAAAATTATGCCTTCTTTCAAAGTATCATAAGATATATTTTATTCAGCAACTTGTCAAACACTATACCTAATTAGTTTTATACAtctctc                                        <  2:379793/138‑1 (MQ=255)
                                                                                                          AATAATCTGATGAGTATGACTCGGATTATTGGTTTTTTATTTTTAAAATTATTCCTTCTTTCAAAGTATCATAAGATATATTTTATTCAGCAACTTGTCAAACACTATACCTAATTAGTTTTATACATCTCTCCTAACaaa                                >  2:201398‑M1/1‑141 (MQ=255)
                                                                                                           ATAATCTGATGAGTATGACTCGGATTATTGGTTTTTTATTTTTAAAATTATTCCTTCTTTCAAAGTATCATAAGATATATTTTATTCAGCAACTTGTCAAACACTATACCTAATTAGTTTTGTACATCTCTCCTAACaaaa                               >  1:463511‑M1/1‑141 (MQ=255)
                                                                                                            TAATCTGATGAGTATGACTCGGATTATTGGTTTTTTATTTTTAAAATTATTCCTTCTTTCAAAGTATCATAAGATATATTTTATTCAGCAACTTGTCAAACACTATACCTAATTAGTTTTATACATCTCTCCTAACAAAAt                              >  2:632788‑M1/1‑141 (MQ=255)
                                                                                                             AATCTGATGAGTATCACTCGGATTATTGGTTTTTTATTTTTAAAATTACACCATCTTTCAAAGTATCATAAGATATATTTTATTCAGCAACCTGTCAAACACCATACCTAATCAGTTTTATACATCTCTccaaaaaaaaaa                             >  2:225769‑M1/1‑139 (MQ=255)
                                                                                                               tatgatgaGTATGACTCGGATTATTGGTTTTTTATTTTTAAAATTATTCCTTCTTTCAAAGTATCATAAGATATATTTTATTCAGCAACTTGTCAAACACTATACCTAATTAGTTTTATACATCTCTCCTAACAAAATCaa                           <  1:376744/139‑1 (MQ=255)
                                                                                                                CTGATGAGTATGACTCGGATTATTGGTTTTTTATTTTTAAAATTATTCCTTCTTTCAAAGTATCATAAGATATATTTTATTCAGCAACTTGTCAAACACTATACCTAATTAGTTTTATACATCTCTCCTAACAAAATCaaa                          >  2:196939‑M1/1‑141 (MQ=255)
                                                                                                                   atgaGTATGACTCGGATTATTGGTTTTTTATTTTTAAAATTATTCCTTCTTTCAAAGTATCATAAGATATATTTTATTCAGCAACTTGTCAAACACTATACCTAATTAGTTTTATACATCTCTCCTAACAAAATCaaaaaa                       >  2:610933/1‑141 (MQ=255)
                                                                                                                     gaGTATGACTCGGATTATTGGTTTTTTATTTTTTTTTTTATTCCTTCTTTAAAAGTATCATAAGATATATTTTATTTAGCAACTTGTCAAACACTATTCCTAATTAGTTTTATACATCTTTCCTAATAAAATCaaaaattt                     >  2:569722/1‑138 (MQ=255)
                                                                                                                      aGTATGACTCGGATTATTGGTTTTTTATTTTTAAAATTATTCCTTCTTTCAAAGTATCATAAGATATATTTTATTCAGCAACTTGTCAAACACTATACCTAATTAGTTTTATGCATCTCTCCTACCAAAATCAAAAAAGCg                    >  2:643916/1‑141 (MQ=255)
                                                                                                                      aGTATGACTCGGATTATTGGTTTTTTATTTTTAAAATTATTCCTTCTTTCAAAGTATCATAAGATATATTTTATTCAGCAACTTGTCAAACACTATACCTAATTAGTTTTATACATCTCTCCTAACAAAATCAAAAAATCg                    >  2:702287/1‑141 (MQ=255)
                                                                                                                      aGTATGACTCGGATTATTGGTTTTTTATTTTTAAAATTATTCCTTCTTTCAAAGTATCATAAGATATATTTTATTCAGCAACTTGTCAAACACTATACCTAATTAGTTTTATACATCTCTCCTAACAAAATCAAAAAATCg                    <  1:189274/141‑1 (MQ=255)
                                                                                                                         aTGACTCGGATTATTGGTTTTTTATTTTTAAAATTATTCCTTCTTTCAAAGTATCATAAGATATATTTTATTCAGCAACTTGTCAAACACTATACCTAATTAGTTTTATACATCTCTCCTAACAAAATCAAAAAATCGGAc                 <  2:733561/141‑1 (MQ=255)
                                                                                                                          tGACTCGGATTATTGGTTTTTTATTTCTAAAATTATTCCTTCTTTCAAAGTATCATAAGATATATTTTATTCAGCAACTTGTCAAACACTATACCTAATTAGTTTTATACATCTCTCCTAACAAAATCAAAAAATCGGACa                <  1:48206/141‑1 (MQ=255)
                                                                                                                              tCGGATTATTGGTTTTTTATTTTTAAAATTATTCCTTCTTTCAAAGTATCATAAGATATATTTTATTCAGCAACTTGTCAAACACTATACCTAATTAGTTTTATACATCTCTCCTAACAAAATCAAAACATCGGACAGATg            >  1:557773/1‑141 (MQ=255)
                                                                                                                                    tattggttTTTTATTTTTAAAATTATTCCTTCTTTCAAAGTATCATAAGATATATTTTATTCAGCAACTTGTCAAACACTATACCTAATTAGTTTTATACATCTCTCCTAACAAAATCAAAAAATCGGACAGATGAAAAGt      <  1:581802‑M2/133‑1 (MQ=255)
                                                                                                                                    tattggttTTTTATTTTTAAAATTATTCCTTCTTTCAAAGTATCATAAGATATATTTTATTCAGCAACTTGTCAAACACTATACCTAATTAGTTTTATACATCTCTCCTAACAAAATCAAAAAATCGGACAGATGAAAAGt      <  2:75889‑M2/133‑1 (MQ=255)
                                                                                                                                      ttggttTTTTATTTTTAAAATTATTCCTTCTTTCAAAGTATCATAAGATATATTTTATTCAGCTACTTGTCAAACACTATACCTAATTAGTTTTATACATCACTCCTAACAAAGTCAAAAAATCGGACAGATGAAAAGTaa    <  2:231413‑M2/135‑1 (MQ=255)
                                                                                                                                       tggttTTTTATTTTTAAAATTATTCCTTCTTTCAAAGTATCATAAGATATATTTTATTCAGCAACTTGTCAAACACTATACCTAATTAGTTTTATACATCTCTCCTAACAAAATCAAAAAATCGGACAGATGAAAAGTaaa   <  1:354091‑M2/136‑1 (MQ=255)
                                                                                                                                       tggttTTTTATTTTAAAAATTATTCCTTCCTTCAAAGTACCAAAAGATATATTTTATTCAGCAACTTGTCAAACACTATACCTAATTAGGTTTATACATCTCTCCTAACAAAATCAAAAAATCGGACAGATGAAAAGTaaa   <  1:65363‑M2/136‑1 (MQ=255)
                                                                                                                                        ggttTTTTTTTTTTAAAATTATTCCTTCTTTCAAAGTATCATAAGATATATTTTATTCAGCAACTTGTCAAACACTATACCTAATTAGTTTTATACATCTCTCCTAACAAAATCAAAAAATCGGACAGATGAAAAGTaaaa  <  1:710812‑M2/137‑1 (MQ=255)
                                                                                                                                            |                                                                                                                                        
AACAGATATTCGTATTGCGTTTAGCTGTGTAGAAAAAGAAGATATCCCACATGTATTTGATTCAATTGCTAAAGCGATTGATGACTTAAGATAATTAATTTCAACCAATAATCTGATGAGTATGACTCGGATTATTGGTTTTTTATTTTTAAAATTATTCCTTCTTTCAAAGTATCATAAGATATATTTTATTCAGCAACTTGTCAAACACTATACCTAATTAGTTTTATACATCTCTCCTAACAAAATCAAAAAATCGGACAGATGAAAAGTAAAA  >  CP000730/2082266‑2082542

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.