| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP000730 | 830841 = | 24 (0.880) | 3 (0.120) | 3/246 | 3.9 | 11.6% | intergenic (+10/‑404) | raiA/secA1 | possible ribosome‑associated inhibitor protein Y/Sec family Type I general secretory pathway preprotein translocase subunit SecA |
| ? | CP000730 | 830871 = | 24 (0.960) | intergenic (+40/‑374) | raiA/secA1 | possible ribosome‑associated inhibitor protein Y/Sec family Type I general secretory pathway preprotein translocase subunit SecA | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TTATTAACTTAACATTCAAATATATACATCCATTAACATTAGCATAGTCACTATGTTTCATTCAACAAATTACATTATCGAACTATGAAATAGTCATAATTTGCTTTTGGAGTATAAAAAAGCACTTGTGCAAAAACACAAGTGCTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP000730/830988‑830841‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cacaagtgctttTTTATACTCCAAAAGCAAATTATGACTATTTCATAGTTCGATAATGTAATTTGTTGAATGAAACATAGTGACTATGCTAATGTTAATGGATGTATATATTTGAATGTTAAGTTAATAATAGTATGTCAGTCTATT > CP000730/830871‑831005 TTAATAACTTAACATTCAAATATATACATCCATTAACATTAGCATAGTCACTATGTTTCATTCAACAAATTACATTATCGAACTATGAAATAGTCATAATTTGCTTTTGGAGTATAAAAAAGCACTTGTGCAAAAACACAA < 2:3/141‑1 TATTAACTTAACATTCAAATATATACATCCATTAACATTAGCATAGTCACTATGTTTCATTCAACAAATTACATTATCGAACTATGAAATAGTCATAATTTGCTTTTGGAGTATAAAAAAGCACTTGTGCAAAAACACAAG < 1:95127/141‑1 ACTTAACATTCAAATATATACATCCATTAACATTAGCATAGTCACTATGTTTCATTCAACAAATTACATTATCGAACTATGAAATAGTCATAATTTGCTTTTGGAGTATAAAAAAGCACTTGTGCAAAAACACAAGTGCTT < 1:288873/141‑1 ATAGTCATAATTTGCTTTTGGAGTATAAAAAAGCACTTGTGCAAAAACACAAGTGCTTTTTTATACTCCAAAAGCAAATTATGACTATTTCATAGTTCGATAATGTAATTTGTTGAATGAAACATAGTGAC > 2:41084/1‑131 ATAGTCATAATTTGCTTTTGGAGTATAAAAAAGCACTTGTGCAAAAACACAAGTGCTTTTTTATACTCCAAAAGCAAATTATGACTATTTCATAGTTCGATAATGTAATTTGTTGAATGAAACATAGTGAC < 1:41084/131‑1 TGCAAAAACACAAGTGCTTTTTTATACTCCAAAAGCAAATTATGACTATTTCATAGTTCGATAATGTAATTTGTTGAATGAAACATAGTGACTATGCTAATGTTAATGGATGTATATATTTGAATGTTAAGTTAATAATAG > 2:2119/1‑141 TGCTTTTTTATACTCCAAAAGCAAATTATGACTATTTCATAGTTCGATAATGTAATTTGTTGAATGAAACATAGTGACTATGCTAATGTTAATGGATGTATATATTTGAATGTTAAGTTAATAATAGTATGTCAGTCTATT < 1:224245/141‑1 TTATTAACTTAACATTCAAATATATACATCCATTAACATTAGCATAGTCACTATGTTTCATTCAACAAATTACATTATCGAACTATGAAATAGTCATAATTTGCTTTTGGAGTATAAAAAAGCACTTGTGCAAAAACACAAGTGCTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP000730/830988‑830841‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cacaagtgctttTTTATACTCCAAAAGCAAATTATGACTATTTCATAGTTCGATAATGTAATTTGTTGAATGAAACATAGTGACTATGCTAATGTTAATGGATGTATATATTTGAATGTTAAGTTAATAATAGTATGTCAGTCTATT > CP000730/830871‑831005 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |