| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP000730 | 2492466 = | 28 (1.020) | 3 (0.120) | 3/248 | 3.9 | 11.0% | intergenic (+9/+37) | yhfP/USA300HOU_2354 | possible zinc (Zn2+) dependent dehydrogenase/possible acetyltransferase |
| ? | CP000730 | 2492499 = | 23 (0.920) | intergenic (+42/+4) | yhfP/USA300HOU_2354 | possible zinc (Zn2+) dependent dehydrogenase/possible acetyltransferase | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TTGAGAGTACATACGTTAGTCTGATTGCAGACTACCCAGCGGATAAATTATATACAAAATTTGGATTTATACCTACCGAACCAGATTCAGGCGGTATGTATATCAAATACTAAATTAAAAAAGACATCTCGCATAACGGGATGTCTTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP000730/2492615‑2492466‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gatgtctttttTAATTTAGTATTTGATATACATACCGCCTGAATCTGGTTCGGTAGGTATAAATCCAAATTTTGTATATAATTTATCCGCTGGGTAGTCTGCAATCAGACTAACGTATGTACTCTCAACAGCCACACCTTTAA > CP000730/2492499‑2492630 TTGAGAGTACATACGTTAGTCTGATTGCAGACTACCCAGCGGATAAATTATATACAAAATTTGGATTTATACCTACCGAACCAGATTCAGGCGGTATGTATATCAAATACTAAATTAAAAAAGACATCTCGCATAACGGGA > 2:304790/1‑141TTGAGAGTACATACGTTAGTCTGATTGCAGACTACCCAGCGGATAAATTATATACAAAATTTGGATTTATACCTACCGAACCAGATTCAGGCGGTATGTATATCAAATACTAAATTAAAAAAGACATCTCGCATAACGGGA > 1:294888/1‑141 AGAGTACATACGTTAGTCTGATTGCAGACTACCCAGCGGATAAATTATATACAAAATTTGGATTTATACCTACCGACCCAGATTCAGGCGGTATGTATATCAAATACTAAATTAAAAAAGACATCGCGCATAACGGGATGT < 1:159704/141‑1 AGTACATACGTTAGTCTGATTGCAGACTACCCAGCGGATAAATTATATACAAAATTTGGATTTATACCTACCGAACCAGATTCAGGCGGTATGTATATCAAATACTAAATTAAAAAAGACATCTCGCATAACGGGATGTCT > 2:152544/1‑141 ACATCTCGCATAACGGGATGTCTTTTTTAATTTAGTATTTGATATACATACCGCCTGA > 1:231538/1‑58 ACATCTCGCATAACGGGATGTCTTTTTTAATTTAGTATTTGATATACATACCGCCTGA < 2:231538/58‑1 CGCATAACGGGATGTCTTTTTTAATTTAGTATTTGATATACATACCGCCTGAATCTGGTTCGGTAGGTATAAATCCAAATTTTGTATATAATTTATCCGCTGGGTAGTCTGCAATCAGACTAACGTATGTACTCTCAACAG > 2:184560/1‑141 GATGTCTTTTTTAATTTAGTATTTGATATACATACCGCCTGAATCTGGTTCGGTAGGTATAAATCCAAATTTTGTATATAATTTATCCGCTGGGTAGTCTGCAATCAGACTAACGTATGTACTCTCAACAGCCACACCTTT > 2:265444/1‑141 TGTCTTTTTTAATTTAGTATTTGATATACATACCGCCTGAATCTGGTTCGGTAGGTATAAATCCAAATTTTGTATATAATTTATCCGCTGGGTAGTCTGCAATCAGACTAACGTATGTACTCTCAACAGCCACACCTTTAA < 1:148113/141‑1 TTGAGAGTACATACGTTAGTCTGATTGCAGACTACCCAGCGGATAAATTATATACAAAATTTGGATTTATACCTACCGAACCAGATTCAGGCGGTATGTATATCAAATACTAAATTAAAAAAGACATCTCGCATAACGGGATGTCTTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP000730/2492615‑2492466‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gatgtctttttTAATTTAGTATTTGATATACATACCGCCTGAATCTGGTTCGGTAGGTATAAATCCAAATTTTGTATATAATTTATCCGCTGGGTAGTCTGCAATCAGACTAACGTATGTACTCTCAACAGCCACACCTTTAA > CP000730/2492499‑2492630 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |