| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP000730 | 2595468 = | 16 (0.590) | 3 (0.110) | 3/260 | 4.1 | 15.2% | coding (423/936 nt) | celM | oligopeptide ABC superfamily ATP binding cassette transporter, membrane protein |
| ? | CP000730 | 2595506 = | 18 (0.680) | coding (385/936 nt) | celM | oligopeptide ABC superfamily ATP binding cassette transporter, membrane protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GTATTGGTCCAGCATTTATGAATACATTGAAATTAACAATAATTTCAAGTGTTATGGTGATGATTACATCAATTATTTTAGGTGTAGTTAGTGCATTAAAAAGAGGAAAGTTCACTGATCGTGCGATACGTTCAGTGGCTTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP000730/2595610‑2595468‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctttcCTCTTTTTAATGCACTAACTACACCTAAAATAATTGATGTAATCATCACCATAACACTTGAAATTATTGTTAATTTCAATGTATTCATAAATGCTGGACCAATACGTTCAGCAACTGGGTCACCTGTAATG > CP000730/2595506‑2595636 GTATTGGTCCAGCATTTATGAATACATTGAAATTAACAATAATTTCAAGTGTTATGGTGATGATTACATCAATTATTTTAGGTGTAGTTAGTGCATTAAAAAGAGGAAAGTTCACTGATCGTGCGATACGTTCAGTGGCTT < 1:278399/141‑1 AAGAGGAAAGTTCACTGATCGTGCGATACGTTCAGTGGCTTTCCTCTTTTTAATGCACTAACTACACCTAAAATAATTGATGTAATCATCACCATAACACTTGAAATTATTGTTAATTTCAATGTATTCATAAATGCTGGA > 1:47650/1‑141 AGTTCACTGATCGTGCGATACGTTCAGTGGCTTTCCTCTTTTTAATGCACTAACTACACCTAAAATAATTGATGTAATCATCACCATAACACTTGAAATTATTGTTAATTTCAATGTATTCATAAATGCTGGACCAATACG > 1:110115/1‑141 AGTGGCTTTCCTCTTTTTAATGCACTAACTACACCTAAAATAATTGATGTAATCATCACCATAACACTTGAAATTATTGTTAATTTCAATGTATTCATAAATGCTGGACCAATACGTTCAGCAACTGGGTCACCTGTAATG < 2:110115/141‑1 CCTCTTTTTAATGCACTAACTACACCTAAAATAATTGATGTAATCATCACCATAACACTTGAAATTATTGTTAATTTCAATGTATTCATAAATGCTGGACCAATACGTTCAGCAA > 1:118412/1‑115 CCTCTTTTTAATGCACTAACTACACCTAAAATAATTGATGTAATCATCACCATAACACTTGAAATTATTGTTAATTTCAATGTATTCATAAATGCTGGACCAATACGTTCAGCAA < 2:118412/115‑1 GTATTGGTCCAGCATTTATGAATACATTGAAATTAACAATAATTTCAAGTGTTATGGTGATGATTACATCAATTATTTTAGGTGTAGTTAGTGCATTAAAAAGAGGAAAGTTCACTGATCGTGCGATACGTTCAGTGGCTTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP000730/2595610‑2595468‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctttcCTCTTTTTAATGCACTAACTACACCTAAAATAATTGATGTAATCATCACCATAACACTTGAAATTATTGTTAATTTCAATGTATTCATAAATGCTGGACCAATACGTTCAGCAACTGGGTCACCTGTAATG > CP000730/2595506‑2595636 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |