New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP000730 2595468 =16 (0.590)3 (0.110) 3/260 4.1 15.2% coding (423/936 nt) celM oligopeptide ABC superfamily ATP binding cassette transporter, membrane protein
?CP000730 2595506 = 18 (0.680)coding (385/936 nt) celM oligopeptide ABC superfamily ATP binding cassette transporter, membrane protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TTCTGGACCTGTTAATCCAGAAGTCGGCAATATGTTTAACTTCACTGAAACGTAAATAATAAGTATTGAAGCTATCCAATATGATGGTAATGCAGTTAGAAAGAAAGCCACTGAACGTATCGCACGATCAGTGAACTTTCCTCTTTTTAATGCACTAACTACACCTAAAATAATTGATGTAATCATCACCATAACACTTGAAATTATTGTTAATTTCAATGTATTCATAAATGCTGGACCAATACGTTCAGCAACTGGGTCACCTGTAATG  >  CP000730/2595366‑2595636
                                                                                                                                            |                                                                                                                                  
ttCTGGACCTGTTAATCCAGAAGTCGGCAATATGTTTAACTTCACTGAAACGTAAATAATAAGTATTGAAGCTATCCAATATGATGGTAATGCAGTTAGAAAGAAGGCCACTGAACGTATCGCACGATCAGTGAACTTTcc                                                                                                                                    <  2:169592/141‑1 (MQ=255)
       ccTGTTAATCCAGAAGTCGGCAATATGTTTAACTTCACTGAAACGTAAATAATAAGTATTGAAGCTATCCAATATGATGGTAATGCAGTTAGAAAGAAAGCCACTGAACGTATCGCACGATCAGTGAACTTTCCTCttttt                                                                                                                             >  2:63244/1‑141 (MQ=255)
         tGTTAATCCAGAAGTCGGCAATATGTTTAACTTCACTGAAACGTAAATAATAAGTATTGAAGCTATCCAATATGATGGTAATGCAGTTAGAAAGAAAGCCACTGAACGTATCGCACGATCAGTGAACTTTCCTCTTTTTaa                                                                                                                           <  1:168930/141‑1 (MQ=255)
                 cAGAAGTCGGCAATATGTTTAACTTCACTGAAACGTAAATAATAAGTATTGAAGCTATCCAATATGATGGTAATGCAGTTAGAAAGAAAGCCACTGAACGTATCGCACGATCAGTGAACTTTCCTCTTTTTAATGCactaa                                                                                                                   >  2:89267/1‑141 (MQ=255)
                         ggCAATATGTTTAACTTCACTGAAACGTAAATAATAAGTATTGAAGCTATCCAATATGATGGTAATGCAGTTAGAAAGAAAGCCACTGAACGTATCGCACGACCAGTGAACTTTCCTCTTTTTAATGCACTAACTactaat                                                                                                           >  2:195302/1‑137 (MQ=255)
                          gCAATATGTTTAACTTCACTGAAACGTAAATAATAAGTATTGAAGCTATCCAATATGATGGTAATGCAGTTAGAAAGAAAGCCACTGAACGTATCGCACGATCAGTGAACTTTCCTCTTTTTAATGCACTAACTACACCTa                                                                                                          >  1:6436/1‑141 (MQ=255)
                                                 aCGTAAATAATAAGTATTGAAGCTATCCAATATGATGGTAATGCAGTTAGAAAGAAAGCCACTGAACGTATCGCACGATCAGTGAACTTTCCTCTTTTTAATGCACTAACTACACCTAAAATAATTGATGTAATCATCAcc                                                                                   >  2:155749/1‑141 (MQ=255)
                                                                aTTGAAGCTATCCAATATGATGGTAATGCAGTTAGAAAGAAAGCCACTGAACGTATCGCACGATCAGTGAACTTTCCTCTTTTTAATGCACTAACTACACCTAAAATAATTGATGTAATCATCACCATAACACTTGAAatt                                                                    <  1:234649/141‑1 (MQ=255)
                                                                          tCCAATATGATGGTAATGCAGTTAGAAAGAAAGCCACTGAACGTATCGCACGATCAGTGAACTTTCCTCTTTTTAATGCACTAACTACACCTAAAATAATTGATGTAATCATCACCATAACACTTGAAATTATTGTTAAtt                                                          <  2:259511/141‑1 (MQ=255)
                                                                                 tgataGTAATGCAGTTAGAAAGAAAGCCACTGAACGTATCGCACGATCAGTGAACTTTCCTCTTTTTAATGCACTAACTACACCTAAAATAATTGATGTAATCATCACCATAACACTTGAAATTATTGTTAATTTCAATGt                                                   <  1:59793/141‑1 (MQ=255)
                                                                                         aTGCAGTTAGAAAGAAAGCCACTGAACGTATCGCACGATCAGTGAACTTTCCTCTTTTTAATGCACTAACTACACCTAAAATAATTGATGTAATCATCACCATAACACTTGAAATTATTGTTAATTTCAATGTATTCATaa                                           <  1:79612/141‑1 (MQ=255)
                                                                                                 agaaagaaAGCCACTGAACGTATCGCACGATCAGTGAACTTTCCTCTTTTTAATGCACTAACTACACCTAAAATAATTGATGTAATCATCACCATAACACTTGAAATTATTGTTAATTTCAATGTATTCATAAATGCTGGa                                   >  2:73261/1‑141 (MQ=255)
                                                                                                        aagCCACTGAACGTATCGCACGATCAGTGAACTTTCCTCTTTTTAATGCACTAACTACACCTAAAATAATTGATGTAATCATCACCATAACACTTGAAATTATTGTTAATTTCAATGTATTCATAAATGCTGGACCAATAc                            >  1:278399/1‑141 (MQ=255)
                                                                                                            cACTGAACGTATCGCACGATCAGTGAACTTTCCTCTTTTTAATGCACTAACTACACCTAAAATAATTGATGTAATCATCACCATAACACTTGAAATTATTGTTAATTTCAATGTATTCATAAATGCTGGACCAATACGTTc                        <  1:262388/141‑1 (MQ=255)
                                                                                                                    gTATCGCACGATCAGTGAACTTTCCTCTTTTTAATGCACTAACTACACCTAAAATAATTGATGTAATCATCACCATAACACTTGAAATTATTGTTAATTTCAATGTATTCATAAATGCTGGACCAATACGTTCAGCAACTg                >  2:37494/1‑141 (MQ=255)
                                                                                                                      aTCGCACGATCAGTGAACTTTCCTCTTTTTAATGCACTAACTACACCTAAAATAATTGATGTAATCATCACCATAACACTTGAAATTATTGTTAATTTCAATGTATTCATAAATGCTGGACCAATACGTTCAGCAACTggg              >  2:124905/1‑141 (MQ=255)
                                                                                                                                 aGTGAACTTTCCTCTTTTTAATGCACTAACTACACCTAAAATAATTGATGTAATCATCACCATAACACTTGAAATTATTGtt                                                              <  2:159759/82‑1 (MQ=255)
                                                                                                                                 aGTGAACTTTCCTCTTTTTAATGCACTAACTACACCTAAAATAATTGATGTAATCATCACCATAACACTTGAAATTATTGtt                                                              >  1:159759/1‑82 (MQ=255)
                                                                                                                                  agtggcTTTCCTCTTTTTAATGCACTAACTACACCTAAAATAATTGATGTAATCATCACCATAACACTTGAAATTATTGTTAATTTCAATGTATTCATAAATGCTGGACCAATACGTTCAGCAACTGGGTCACCTGTAATg  <  2:110115/136‑1 (MQ=255)
                                                                                                                                           ccTCTTTTTAATGCACTAACTACACCTAAAATAATTGATGTAATCATCACCATAACACTTGAAATTATTGTTAATTTCAATGTATTCATAAATGCTGGACCAATACGTTCAGCaa                   >  1:118412/1‑115 (MQ=255)
                                                                                                                                           ccTCTTTTTAATGCACTAACTACACCTAAAATAATTGATGTAATCATCACCATAACACTTGAAATTATTGTTAATTTCAATGTATTCATAAATGCTGGACCAATACGTTCAGCaa                   <  2:118412/115‑1 (MQ=255)
                                                                                                                                            |                                                                                                                                  
TTCTGGACCTGTTAATCCAGAAGTCGGCAATATGTTTAACTTCACTGAAACGTAAATAATAAGTATTGAAGCTATCCAATATGATGGTAATGCAGTTAGAAAGAAAGCCACTGAACGTATCGCACGATCAGTGAACTTTCCTCTTTTTAATGCACTAACTACACCTAAAATAATTGATGTAATCATCACCATAACACTTGAAATTATTGTTAATTTCAATGTATTCATAAATGCTGGACCAATACGTTCAGCAACTGGGTCACCTGTAATG  >  CP000730/2595366‑2595636

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.