New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | CP000730 | 2595468 = | 16 (0.590) | 3 (0.110) | 3/260 | 4.1 | 15.2% | coding (423/936 nt) | celM | oligopeptide ABC superfamily ATP binding cassette transporter, membrane protein |
? | CP000730 | 2595506 = | 18 (0.680) | coding (385/936 nt) | celM | oligopeptide ABC superfamily ATP binding cassette transporter, membrane protein | |||||
Rejected: Coverage evenness skew score above cutoff. | |||||||||||
Rejected: Frequency below/above cutoff threshold. |
CGTAATAACGATCACTGGCAATATGTAACTTTCTGGACCTGTTAATCCAGAAGTCGGCAATATGTTTAACTTCACTGAAACGTAAATAATAAGTATTGAAGCTATCCAATATGATGGTAATGCAGTTAGAAAGAAAGCCACTGAACGTATCGCACGATCAGTGAACTTTCCTCTTTTTAATGCACTAACTACACCTAAAATAATTGATGTAATCATCACCATAACACTTGAAATTATTGTTAATTTCAATGTATTCATAAATGCTGGA > CP000730/2595336‑2595603 | cGTAATAACGATCACTGGCAATATGTAACTTTCTGGACCTGTTAATCCAGAAGTCGGCAATATGTTTAACTTCACTGAAACGTAAATAATAAGTATTGAAGCTATCCAATATGATGGTAATGCAGTTAGAAAGAAAGCCAc < 2:156527/141‑1 (MQ=255) aTCACTGGCAATATGTAACTTTCTGGACCTGTTAATCCAGAAGTCGGCAATATGTTTAACTTCACGGAAACGTAAATAATAAGTATTGAAGCTATCCAATATGATGGTAATGCAGTTAGAAAGAAAGCCACTGAACGTATc > 1:259511/1‑141 (MQ=255) tCACTGGCAATATGTAACTTTCTGGACCTGTTAATCCAGAAGTCGGCAATATGTTTAACTTCACTGAAACGTAAATAATAAGTATTGAAGCTATCCAATATGATGGTAATGCAGTTAGAAAGAAAGCCACTGAACGTATCg > 2:168930/1‑141 (MQ=255) gTAACTTTCTGGACCTGTTAATCCAGAAGTCGGCAATATGTTTAACTTCACTGAAACGTAAATAATAAGTATTGAAGCTATCCAATATGATGGTAATGCAGTTAGAAAGAAAGCCACTGAACGTATCGCACGATCAGTGaa > 2:79612/1‑141 (MQ=255) ttCTGGACCTGTTAATCCAGAAGTCGGCAATATGTTTAACTTCACTGAAACGTAAATAATAAGTATTGAAGCTATCCAATATGATGGTAATGCAGTTAGAAAGAAGGCCACTGAACGTATCGCACGATCAGTGAACTTTcc < 2:169592/141‑1 (MQ=255) ccTGTTAATCCAGAAGTCGGCAATATGTTTAACTTCACTGAAACGTAAATAATAAGTATTGAAGCTATCCAATATGATGGTAATGCAGTTAGAAAGAAAGCCACTGAACGTATCGCACGATCAGTGAACTTTCCTCttttt > 2:63244/1‑141 (MQ=255) tGTTAATCCAGAAGTCGGCAATATGTTTAACTTCACTGAAACGTAAATAATAAGTATTGAAGCTATCCAATATGATGGTAATGCAGTTAGAAAGAAAGCCACTGAACGTATCGCACGATCAGTGAACTTTCCTCTTTTTaa < 1:168930/141‑1 (MQ=255) cAGAAGTCGGCAATATGTTTAACTTCACTGAAACGTAAATAATAAGTATTGAAGCTATCCAATATGATGGTAATGCAGTTAGAAAGAAAGCCACTGAACGTATCGCACGATCAGTGAACTTTCCTCTTTTTAATGCactaa > 2:89267/1‑141 (MQ=255) ggCAATATGTTTAACTTCACTGAAACGTAAATAATAAGTATTGAAGCTATCCAATATGATGGTAATGCAGTTAGAAAGAAAGCCACTGAACGTATCGCACGACCAGTGAACTTTCCTCTTTTTAATGCACTAACTactaat > 2:195302/1‑137 (MQ=255) gCAATATGTTTAACTTCACTGAAACGTAAATAATAAGTATTGAAGCTATCCAATATGATGGTAATGCAGTTAGAAAGAAAGCCACTGAACGTATCGCACGATCAGTGAACTTTCCTCTTTTTAATGCACTAACTACACCTa > 1:6436/1‑141 (MQ=255) aCGTAAATAATAAGTATTGAAGCTATCCAATATGATGGTAATGCAGTTAGAAAGAAAGCCACTGAACGTATCGCACGATCAGTGAACTTTCCTCTTTTTAATGCACTAACTACACCTAAAATAATTGATGTAATCATCAcc > 2:155749/1‑141 (MQ=255) aTTGAAGCTATCCAATATGATGGTAATGCAGTTAGAAAGAAAGCCACTGAACGTATCGCACGATCAGTGAACTTTCCTCTTTTTAATGCACTAACTACACCTAAAATAATTGATGTAATCATCACCATAACACTTGAAatt < 1:234649/141‑1 (MQ=255) tCCAATATGATGGTAATGCAGTTAGAAAGAAAGCCACTGAACGTATCGCACGATCAGTGAACTTTCCTCTTTTTAATGCACTAACTACACCTAAAATAATTGATGTAATCATCACCATAACACTTGAAATTATTGTTAAtt < 2:259511/141‑1 (MQ=255) tgataGTAATGCAGTTAGAAAGAAAGCCACTGAACGTATCGCACGATCAGTGAACTTTCCTCTTTTTAATGCACTAACTACACCTAAAATAATTGATGTAATCATCACCATAACACTTGAAATTATTGTTAATTTCAATGt < 1:59793/141‑1 (MQ=255) aTGCAGTTAGAAAGAAAGCCACTGAACGTATCGCACGATCAGTGAACTTTCCTCTTTTTAATGCACTAACTACACCTAAAATAATTGATGTAATCATCACCATAACACTTGAAATTATTGTTAATTTCAATGTATTCATaa < 1:79612/141‑1 (MQ=255) agaaagaaAGCCACTGAACGTATCGCACGATCAGTGAACTTTCCTCTTTTTAATGCACTAACTACACCTAAAATAATTGATGTAATCATCACCATAACACTTGAAATTATTGTTAATTTCAATGTATTCATAAATGCTGGa > 2:73261/1‑141 (MQ=255) | CGTAATAACGATCACTGGCAATATGTAACTTTCTGGACCTGTTAATCCAGAAGTCGGCAATATGTTTAACTTCACTGAAACGTAAATAATAAGTATTGAAGCTATCCAATATGATGGTAATGCAGTTAGAAAGAAAGCCACTGAACGTATCGCACGATCAGTGAACTTTCCTCTTTTTAATGCACTAACTACACCTAAAATAATTGATGTAATCATCACCATAACACTTGAAATTATTGTTAATTTCAATGTATTCATAAATGCTGGA > CP000730/2595336‑2595603 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |