| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP000730 | = 2760876 | 54 (0.850) | 3 (0.050) | 3/262 | 10.3 | 5.5% | coding (123/1371 nt) | citM | CitMHS family citrate‑magnesium (Mg2+):proton (H+) citrate‑calcium (Ca2+):proton (H+) symporter |
| ? | CP000730 | = 2760923 | 52 (0.870) | coding (76/1371 nt) | citM | CitMHS family citrate‑magnesium (Mg2+):proton (H+) citrate‑calcium (Ca2+):proton (H+) symporter | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CAAGCGGCTTGAATAAACCACTATCGTTCATGATGCCAAAGAAAATAATGGCAAAGATAAACATAATAACAACGTTGATGACTTGATCTAACCCTTTAGCAAAAAATCCAACCAAATCTGTCACACTATATCCTAAAATCATTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP000730/2760731‑2760876‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcattgccAAAAAGATAAATCCAGTTGTAGGTATGACAATCATACCTTGCTTAGGGGCAATGATTTTAGGATATAGTGTGACAGATTTGGTTGGATTTTTTGCTAAAGGGTTAGATCAAGTCATCAACGTTGTTATTATGTTTATC < CP000730/2760923‑2760786 CAAGCGGCTTGAATAAACCACTATCGTTCATGATGCCAAAGAAAATAATGGCAAAGATAAACATAATAACAACGTTGATGACTTGATCTAACCCTTTAGCAAAAAATCCAACCAAATCTGTCACACTATATCCTAAAATCA > 1:256208/1‑141 ATAAACATAATAACAACGTTGATGACTTGATCTAACCCTTTAGCAAAAAATCCAACCAAATCTGTCACACTATATCCTAAAATCATTGCCAAAAAGATAAATCCAGTTGTAGGTATGACAATCATACCTTGCTTAGGGGCA < 1:459152/141‑1 AAACATAATAACAACGTTGATGACTTGATCTAACCCTTTAGCAAAAAATCCAACCAAATCTGTCACACTATATCCTAAAATCATTGCCAAAAAGATAAATCCAGTTGTAGGTATGACAATCATACCTTGCTTAGGGGCAAT < 1:554456/141‑1 AACACAATAACCACGTTGATGACTTGATCTAACCCTTTAGCAAAAAATCCAACCAAATCTGTCACACTATATCCTAAAATCATTGCCAAAAAGATAAATCCAGTTGTAGGTATGACAATCATACCTTGCTTAGGGGCAATG < 1:481424/141‑1 TTGCCAAAAAGATAAATCCAGTTGTAGGTATGACAATCATACCTTGCTTAGGGGCAATGATTTTAGGATATAGTGTGACAGATTTGGTTGGATTTTTTGCTAAAGGGTTAGATCAAGTCATCAACGTTGTTATTATGTTTA > 2:289813/1‑141 GCCAAAAAGATAAATCCAGTTGTAGGTATGACAATCATACCTTGCTTAGGGGCAATGATTTTAGGATATAGTGTGACAGATTTGGTTGGATTTTTTGCTAAAGGGTTAGATCAAGTCATCAACGTTGTTATTATGTTTATC < 1:544326/141‑1 CAAGCGGCTTGAATAAACCACTATCGTTCATGATGCCAAAGAAAATAATGGCAAAGATAAACATAATAACAACGTTGATGACTTGATCTAACCCTTTAGCAAAAAATCCAACCAAATCTGTCACACTATATCCTAAAATCATTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP000730/2760731‑2760876‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcattgccAAAAAGATAAATCCAGTTGTAGGTATGACAATCATACCTTGCTTAGGGGCAATGATTTTAGGATATAGTGTGACAGATTTGGTTGGATTTTTTGCTAAAGGGTTAGATCAAGTCATCAACGTTGTTATTATGTTTATC < CP000730/2760923‑2760786 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |