New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP000730 = 276087654 (0.850)3 (0.050) 3/262 10.3 5.5% coding (123/1371 nt) citM CitMHS family citrate‑magnesium (Mg2+):proton (H+) citrate‑calcium (Ca2+):proton (H+) symporter
?CP000730 = 2760923 52 (0.870)coding (76/1371 nt) citM CitMHS family citrate‑magnesium (Mg2+):proton (H+) citrate‑calcium (Ca2+):proton (H+) symporter
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GATAAACATAATAACAACGTTGATGACTTGATCTAACCCTTTAGCAAAAAATCCAACCAAATCTGTCACACTATATCCTAAAATCATTGCCCCTAAGCAAGGTATGATTGTCATACCTACAACTGGATTTATCTTTTTGGCAATGAGTAAACCTACAATTGAAATAATAATAATGAGCCCCATTACTGTTAACCACATATTATCACTATTCATATTATTTTCTCCCTCCACTTTTAATACAATTTACATAATCCCCCTCTTTAACTTAAATATTAT  >  CP000730/2760786‑2761061
                                                                                                                                         |                                                                                                                                          
gATAAACATAATAACAACGTTGATGACTTGATCTAACCCTTTAGCAAAAAATCCAACCAAATCTGTCACACTATATCCTAAAATCATTGCCCCTAAGCAAGGTATGATTGTCATACCTACAACTGGATTTATCTTTTTGGc                                                                                                                                         >  1:544326/1‑141 (MQ=255)
  tAAACATAATAACAACGTTGATGACTTGATCTAACCCTTTAGCAAAAAATCCAACCAAATCTGTCACACTATATCCTAAAATCATTGCCCCTAAGCAAGGTATGATTGTCATACCTACAACTGGATTTATCTTTTTGGCaa                                                                                                                                       <  2:289813/141‑1 (MQ=255)
          ataaCAACGTTGATGACTTGATCTAACCCTTTAGCAAAAAATCCAACCAAATCTGTCACACTATATCCTAACATCATTGCCCCTGAGCTAGGTATGATTGTCATACCTACAACTGGATTTATCTTTTTGGCAATGAGTaaa                                                                                                                               <  1:135999/141‑1 (MQ=255)
              caacGTTGATGACTTGATCTAACCCTTTAGCAAAAAATCCAACCAAATCTGTCACACTATATCCTAAAATCATTGCCCCTAAGCAAGGTATGATTGTCATACCTACAACTGGATTTATCTTTTTGGCAATGAGTAAACCTa                                                                                                                           >  2:79060/1‑141 (MQ=255)
              caacGTTGATGACTTGATCTAACCCTTTAGCAAAAAATCCAACCAAATCTGTCACACTATATCCTAAAATCATTGCCCCTAAGCAAGGTATGATTGTCATACCTACAACTGGATTTATCTTTTTGGCAATGAGTAAACCTa                                                                                                                           <  1:568515/141‑1 (MQ=255)
                 cGTTGATGACTTGATCTAACCCTTTAGCAAAAAATCCAACCAAATCTGTCACACTATATCCTAAAATCATTGCCCCTAAGCAAGGTATGATTGTCATACCTACAACTGGATTTATCTTTTTGGCAATGAGTAAACCTACaa                                                                                                                        <  1:643347/141‑1 (MQ=255)
                  gTTGATGACTTGATCTAACCCTTTAGCAAAAAATCCAACCAAATCTGTCACACTATATCCTAAAATCATTGCCCCTAAGCAAGGTATGATTGTCATACCTACAACTGGATTTATCTTTTTGGCAATGAGTAAACCTACAAt                                                                                                                       <  1:273551/141‑1 (MQ=255)
                    tgatgaCTTGATCTAACCCTTTAGCAAAAAATCCAACCAAATCTGTCACACTATATCCTAAAATCATTGCCCCTAAGCAAGGTATGATTGTCATACCTACAACTGGATTTATCTTTTTGGCAATGAGTAAACCTACAATTg                                                                                                                     <  2:172656/141‑1 (MQ=255)
                     gatgaCTTGATCTAACCCTTTAGCAAAAAATCCAACCAAATCTGTCACACTATATCCTAAAATCATTGCCCCTAAGCAAGGTATGATTGTCATACCTACAACTGGATTTATCTTTTTGGCAATGAGTAAACCTACAATTGa                                                                                                                    <  1:77028/141‑1 (MQ=255)
                       tgaCTTGATCTAACCCTTTAGCAAAAAATCCAACCAAATCTGTCACACTATATCCTAAAATCATTGCCCCTAAGCAAGGTATGATTGTCATACCTACAACTGGATTTATCTTTTTGGCAATGAGTAAACCTACAATTGaaa                                                                                                                  >  1:42762/1‑141 (MQ=255)
                             gATCTAACCCTTTAGCAAAAAATCCAACCAAATCTGTCACACTATATCCTAAAATCATTGCCCCTAAGCAAGGTATGATTGTCATACCTACAACTGGATTTATCTTTTTGGCAATGAGTAAACCTACAATTGAaataataa                                                                                                            <  2:124203/141‑1 (MQ=255)
                                   aCCCTTTAGCAAAAAATCCAACCAAATCTGTCACACTATATCCTAAAATCATTGCCCCTAAGCAAGGTATGATTGTCATACCTACAACTGGATTTATCTTTTTGGCAATGAGTAAACCTACAATTGAAATAATAATAATGa                                                                                                      <  2:167375/141‑1 (MQ=255)
                                    cccTTTAGCAAAAAATCCAACCAAATCTGTCACACTATATCCTAAAATCATTGCCCCTAAGCAAGGTATGATTGTCATACCTACAACTGGATTTATCTTTTTGGCAATGAGTAAACCTACAATTGAAATAATAATAATGAg                                                                                                     >  1:275583/1‑141 (MQ=255)
                                       atcgtcgaaaaaTCCAACCAAATCTGTCACACTATATCCTAAAATCATTGCCCCTAAGCAAGGTATGATTGTCGTACTTACAACTGGATTTATCTTTTTGTCAATGAGTAAACCTACAATTGAAATAATAATAATGAGctc                                                                                                  <  2:542706/134‑3 (MQ=255)
                                        ttAGCAAAAAATCCAACCAAATCTGTCACACTATATCCTAAAATCATTGCCCCTAAGCAAGGTATGATTGTCATACCTACAACTGGATTTATCTTTTTGGCAATGAGTAAACCTACAATTGAAATAATAATAATGAGcccc                                                                                                 <  2:459476/141‑1 (MQ=255)
                                            cAAAAAATCCAACCAAATCTGTCACACTATATCCTAAAATCATTGCCCCTAAGCAAGGTATGATTGTCATACCTACAACTGGATTTATCTTTTTGGCAATGAGTAAACCTACAATTGAAATAATAATAATGAGCCCCATTa                                                                                             >  1:343795/1‑141 (MQ=255)
                                              aaaaaTCCAACCAAATCTGTCACACTATATCCTAAAATCATTGCCCATAAGCAAGGTATGATTGTCATACCTACAACTGGATTTATCTTTTTGGCAATGAGTAAACCTACAATTGAAATAATAATAATGAGCCCCATTACt                                                                                           >  1:157341/1‑141 (MQ=255)
                                                 aaTCCAACCAAATCTGTCACACTATATCCTAAAATCATTGCCCCTAAGCAAGGTATGATTGTCATACCTACAACTGGATTTATCTTTTTGGCAATGAGTAAACCTACAATTGAAATAATAATAATGAGCCCCATTACTGtt                                                                                        >  1:332501/1‑141 (MQ=255)
                                                     caaccaaATCTGTCACACTATATCCTAAAATCATTGCCCCTAAGCAAGGTATGATTGTCATACCTACAACTGGATTTATCTTTTTGGCAATGAGTAAACCTACAATTGAAATAATAATAATGAGCCCCATTACTGTTAAcc                                                                                    <  2:544326/141‑1 (MQ=255)
                                                     caaccaaATCTGTCACACTATATCCTAAAATCATTGCCCCTAAGCAAGGTATGATTGTCATACCTACAACTGGATTTATCTTTTTGGCAATGAGTAAACCTACAATTGAAATAATAATAATGAGCCCCATTACTGTTAAcc                                                                                    <  1:60248/141‑1 (MQ=255)
                                                      aaccaaATCTGTCACACTATATCCTAAAATCATTGCCCCTAAGCAAGGTATGATTGTCATACCTACAACTGGATTTATCTTTTTGGCAATGAGTAAACCTACAATTGAAATAATAATAATGAGCCCCATTACTGTTAAccc                                                                                   >  1:312816/1‑140 (MQ=255)
                                                      aaccaaATCTGTCACACTATATCCTAAAATCATTGCCCCTAAGCAAGGTATGATTGTCATACCTACAACTGGATTTATCTTTTTGGCAATGAGTAAACCTACAATTGAAATAATAATAATGAGCCCCATTACTGTTAACca                                                                                   <  1:66007/141‑1 (MQ=255)
                                                                  cacaCTATATCCTAAAATCATTGCCCCTAAGCAAGGTATGATTGTCATACCTACAACTGGATTTATCTTTTTGGCAATGAGTAAACCTACAATTGAAATAATAATAATGAGCCCCATTACTGTTAACCACATATTATCACt                                                                       <  2:146409/141‑1 (MQ=255)
                                                                    cacTATATCCTAAAATCATTGCCCCTAAGCAAGGTATGATTGTCATACCTACAACTGGATTTATCTTTTTGGCAATGAGTAAACCTACAATTGAAATAATAATAATGAGCCCCATTACTGTTAACCACATATTATCACTAt                                                                     >  2:336932/1‑141 (MQ=255)
                                                                     acTATATCCTAAAATCATTGCCCCTAAGCAAGGTATGATTGTCATACCTACAACTGGATTTATCTTTTTGGCAATGAGTAAACCTACAATTGAAATAATAATAATGAGCCCCATTACTGTTAACCACATATTATCACTAtt                                                                    <  2:391659/141‑1 (MQ=255)
                                                                            ccTAAAATCATTGCCCCTAAGCAAGGTATGATTGTCATACCTACAACTGGATTTATCTTTTTGGCAATGAGTAAACCTACAATTGAAATAATAATAATGAGCCCCATTACTGTTAACCACATATTATCACTATTCAtatta                                                             <  2:518911/141‑1 (MQ=255)
                                                                               aaaaTCATTGCCCCTAAGCAAGGTATGATTGTCATACCTACAACTGGATTTATCTTTTTGGCAATGAGTAAACCTACAATTGAAATAATAATAATGAGCCCCATTACTGTTAACCACATATTATCACTATTCATATTAttt                                                          >  2:221705/1‑141 (MQ=255)
                                                                               aaaaTCATTGCCCCTAAGCAAGGTATGATTGTCATACCTACAACTGGATTTATCTTTTTGGCAATGAGTAAACCTACAATTGAAATAATAATAATGAGCCCCATTACTGTTAACCACATATTATCACTATTCATATTAttt                                                          <  2:579687/141‑1 (MQ=255)
                                                                               aaaaTCATTGCCCCTAAGCAAGGTATGATTGTCATACCTACAACTGGATTTATCTTTTTGGCAATGAGTAAACCTACAATTGAAATAATAATAATGAGCCCCATTACTGTTAACCACATATTATCACTATTCATATTAttt                                                          >  2:446678/1‑141 (MQ=255)
                                                                                aaaTCATTGCCCCTAAGCAAGGTATGATTGTCATACCTACAACTGGATTTATCTTTTTGGCAATGAGTAAACCTACAATTGAAATAATAATAATGAGCCCCATTACTGTTAACCACATATTATCACTATTCATATTAtttt                                                         >  2:183491/1‑141 (MQ=255)
                                                                                  aTCATTGCCCCTAAGCAAGGTATGATTGTCATACCTACAACTGGATTTATCTTTTTGTCAATGAGTAAACCTACAATTGAAATAATAATAATGAGCCCCATTACTGTTAACCACATATTATCACTATTCATATTATTTtct                                                       >  1:142685/1‑141 (MQ=255)
                                                                                  aTCATTGCCCCTAAGCAAGGTATGATTGTCATACCTACAACTGGATTTATCTTTTTGGCAATGAGTAAACCTACAATTGAAATAATAATAATGAGCCCCATTACTGTTAACCACATATTATCACTATTCATATTATTTtct                                                       <  2:608488/141‑1 (MQ=255)
                                                                                    cATTGCCCCTAAGCAAGGTATGATTGTCATACCTACAACTGGATTTATCTTTTTGGCAATGAGTAAACCTACAATTGAAATAATAATAATGAGCCCCATTACTGTTAACCACATATTATCACTATTCATATTATTTTctcc                                                     <  2:673587/141‑1 (MQ=255)
                                                                                        gCCCCTAAGCAAGGTATGATTGTCATACCTACAACTGGATTTATCTTTTTGGCAATGAGTAAACCTACAATTGAAATAATAATAATGAGCCCCATTACTGTTAACCACATATTATCACTATTCATATTATTTTctccctcc                                                 <  2:60493/141‑1 (MQ=255)
                                                                                         ccccTAAGCAAGGTATGATTGTCATACCTACAACTGGATTTATCTTTTTGGCAATGAGTAAACCTACAATTGAAATAATAATAATGAGCCCCATTACTGTTAACCACATATTATCACTATTCATATTATTTTCTCCCTCCa                                                >  1:291987/1‑141 (MQ=255)
                                                                                          cccTAAGCAAGGTATGATTGTCATACCTACAACTGGATTTATCTTTTTGGCAATGAGTAAACCTACAATTGAAATAATAATAATGAGCCCCATTACTGTTAACCACATATTATCACTATTCATATTATTTTCTCCCTCCAc                                               <  2:678996/141‑1 (MQ=255)
                                                                                             tAAGCAAGTTATGATTGTCATACCTACAACTGGATTTATCTTTTTGGCAATGAGTAAACCTACAATTGAAATAATAATAATGAGCTCCATTACTGTTAACCACATATTATCACTATTCATATTATTTTCTCCCTCCACttt                                            <  2:107387/141‑1 (MQ=255)
                                                                                             tAAGCAAGGTATGATTGTCATACCTACAACTGGATTTATCTTTTTGGCAATGAGTAAACCTACAATTGAAATAATAATAATGAGCCCCATTACTGTTAACCACATATTATCACTATTCATATTATTTTCTCCCTCCACttt                                            <  2:17593/141‑1 (MQ=255)
                                                                                             tAAGCAAGGTATGATTGTCATACCTACAACTGGATTTATCTTTTTGGCAATGAGTAAACCTACAATTGAAATAATAATAATGAGCCCCATTACTGTTAACCACATATTATCACTATTCATATTATTTTCTCCCTCCACttt                                            <  1:20318/141‑1 (MQ=255)
                                                                                                  aaGGTATGATTGTCATACCTACAACTGGATTTATCTTTTTGGCAATGAGTAAACCTACAATTGAAATAATAATAATGAGCCCCATTACTGTTAACCACATATTATCACTATTCATATTATTTTCTCCCTCCACTTTTAATa                                       <  1:431348/141‑1 (MQ=255)
                                                                                                    ggTATGATTGTCATACCTACAACTGGATTTATCTTTTTGGCAATGAGTAAACCTACAATTGAAATAATAATAATGAGCCCCATTACTGTTAACCACATATTATCACTATTCat                                                                 <  1:103200/113‑1 (MQ=255)
                                                                                                    ggTATGATTGTCATACCTACAACTGGATTTATCTTTTTGGCAATGAGTAAACCTACAATTGAAATAATAATAATGAGCCCCATTACTGTTAACCACATATTATCACTATTCat                                                                 >  2:103200/1‑113 (MQ=255)
                                                                                                    ggTATGATTGTCATACCTACAACTGGATTTATCTTTTTGGCAATGAGTAAACCTACAATTGAAATAATAATAATGAGCCCCATTACTGTTAACCACATATTATCACTATTCATATTATTTTCTCCCTCCACTTTTAATACa                                     >  1:136756/1‑141 (MQ=255)
                                                                                                       aTGATTGTCATACCTACAACTGGATTTATCTTTTTGGCAATGAGTAAACCTACAATTGAAATAATAATAATGAGCCCCATTACTGTTAACCACATATTATCACTATTCATATTATTTTCTCCCTCCACTTTTAATACAAtt                                  >  2:232938/1‑141 (MQ=255)
                                                                                                                     tACAACTGGATTTATCTTTTTTTTTTTTTTTTTACCTACAATTGACATAATAATAATGAGCCCCATTACTGTTAACCACATATTATCACTCTTCATATTTTTTTCTCCCTCCACTTTTAATACAATTTACTTattttccct                    >  2:209173/1‑133 (MQ=255)
                                                                                                                        aaCTGGATTTATCTTTTTGGCAATGAGTAAACCTACCATTGAAATAATAATAATGAGCCCCATTACTGTTAACCACATATTATCACTATTCATATTATTTTCTCCCTCCCCTCTTAATACAATTTACATAATCCCCCTCtt                 >  1:604974/1‑141 (MQ=255)
                                                                                                                        aaCTGGATTTATCTTTTTGGCAATGAGTAAACCTACAATTGAAATAATAATAATGAGCCCCATTACTGTTAACCACATATTATCACTATTCATATTATTTTCTCCCTCCACTTTTAATACAATTTACATAATCCCCCTCtt                 >  2:250939/1‑141 (MQ=255)
                                                                                                                         aCTGGATTTATCTTTTTGGCAATGAGTAAACCTACAATTGAAATAATAATAATGAGCCCCATTACTGTTAACCACATATTATCACTATTCATATTATTTTCTCCCTCCACTTTTAATACAATTTACATAATCCCCCTCttt                >  1:75406/1‑141 (MQ=255)
                                                                                                                         aCTGGATTTATCTTTTTGGCAATGAGTAAACCTACAATTGAAATAATAATAATGAGCCCCATTACTGTTAACCACATATTATCACTATTCATATTATTTTCTCCCTCCACTTTTAATACAATTTACATAATACCCCTCttt                >  1:439614/1‑141 (MQ=255)
                                                                                                                           tGGATTTATCTTTTTGGCAATGAGTAAACCTACAATTGAAATAATAATAATGAGCCCCATTACTGTTAACCACATATTATCACTATTCATATTATTTTCTCCCTCCACTTTTAATACAATTTACATAATCCCCCTCTTTaa              >  2:410573/1‑141 (MQ=255)
                                                                                                                             gATTTATCTTTTTGGCAATGAGTAAACCTACAATTGAAATAATAATAATGAGCCCCATTACTGTTAACCACATATTATCACTATTCATATTATTTTCTCCCTCCACTTTTAATACAATTTACATAATCCCCCTCTTTAACt            <  2:332501/141‑1 (MQ=255)
                                                                                                                                 tATCTTTTTGGCAATGAGTAAACCTACAATTGAAATAATAATAATGAGCCCCATTACTGTTAACCACATATTATCACTATTCATATTATTTTCTCCCTCCACTTTTAATACAATTTACATAATCCCCCTCTTTAACTTaaa        >  1:170976/1‑141 (MQ=255)
                                                                                                                                  aTCTTTTTGGCAATGAGTAAACCTACAATTGAAATAATAATAATGAGCCCCATTACTGTTAACCACATATTATCACTATTCATATTATTTTCTCCCTCCACTTTTAATACAATTTACATAATCCCCCTCTTTAACTTAAat       >  2:646565/1‑141 (MQ=255)
                                                                                                                                       tttGGCAATGAGTAAACCTACAATTGAAATAATAATAATGAGCCCCATTACTGTTAACCACATATTATCACTATTCATATTATTTTCTCCCTCCACTTTTAATACAATTTACATAATCCCCCTCTTTAACTTAAAtattat  >  1:293158/1‑141 (MQ=255)
                                                                                                                                         |                                                                                                                                          
GATAAACATAATAACAACGTTGATGACTTGATCTAACCCTTTAGCAAAAAATCCAACCAAATCTGTCACACTATATCCTAAAATCATTGCCCCTAAGCAAGGTATGATTGTCATACCTACAACTGGATTTATCTTTTTGGCAATGAGTAAACCTACAATTGAAATAATAATAATGAGCCCCATTACTGTTAACCACATATTATCACTATTCATATTATTTTCTCCCTCCACTTTTAATACAATTTACATAATCCCCCTCTTTAACTTAAATATTAT  >  CP000730/2760786‑2761061

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.