New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP000730 691779 =101 (1.130)3 (0.040) 3/248 15.1 3.2% coding (43/1056 nt) USA300HOU_0634 hypothetical protein
?CP000730 691838 = 91 (1.130)intergenic (‑17/+44) USA300HOU_0634/USA300HOU_0635 hypothetical protein/possible replication initiation protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 111 total aligned reads displayed.

ATTACAATCATCTTACGACGATTTTTAAATTTTGGAATTACTCGGCGTTGTTCTTTAGGAATATCAAAATGCTTTCCGTTTTTAGAAAATCGTGTTAAAATGTACTTGCTTATTATTTTCATAAACGATTTTCTAAAATCCTTTACGAAATTTTTAATAAAAATCACATCCCAGTTATTTTTTTAACACTTATCTTTTGATAAGTGCTTTTTTTGTTTTAAAGCCTCCAAATAATGATTAATTCTATTCGTATGCTCATCATTAAATTGTGAATGCGCT  >  CP000730/691700‑691978
                                                                                                                                           |                                                                                                                                            
aTTACAATCATCTTACGACGATTTTTAAATTTTGGAATTACTCGGCGTTGTTCTTTAGGAATATCAAAATGCTTTCCGTTTTTAGAAAATCGTGTTAAAATGTACTTGCTTATTATTTTCATAAACGATTTTCTAAAATcc                                                                                                                                            >  1:210189/1‑141 (MQ=255)
aTTACAATCATCTTACGACGATTTTTAAATTTTGGAATTACTCGGCGTTGTTCTTTAGGAATATCAAAATGCTTTCCGTTTTTAGAAAATCGTGTTAAAATGTACTTGCTTATTATTTTCATAAACGATTTTCTAAAATcc                                                                                                                                            >  2:381060/1‑141 (MQ=255)
   aCAATCATCTTACGACGATTTTTAAATTTTGGAATTACTCGGCGTTGTTCTTTAGGAATATCAAAATGCTTTCCGTTTTTAGAAAATCGTGTTAAAATGTACTTGCTTATTATTTTCATAAACGATTTTCTAAAATCCttt                                                                                                                                         >  2:568591/1‑141 (MQ=255)
   aCAATCATCTTACGACGATTTTTAAATTTTGGAATTACTCGGCGTTGTTCTTTAGGAATATCAAAATGCTTTCCGTTTTTAGAAAATCGTGTTAAAATGTACTTGCTTATTATTTTCATAAACGATTTTCTAAAATCCttt                                                                                                                                         >  1:960963/1‑141 (MQ=255)
   aCAATCATCTTACGACGATTTTTAAATTTTGGAATTACTCGGCGTTGTTCTTTAGGAATATCAAAATGCTTTCCGTTTTTAGAAAATCGTGTTAAAATGTACTTGCTTATTATTTTCATAAACGATTTTCTAAAATCCttt                                                                                                                                         <  2:38160/141‑1 (MQ=255)
    cAATCATCTTACGACGATTTTTAAATTTTGGAATTACTCGGCGTTGTTCTTTAGGAATATCAAAATGCTTTCCGTTTTTAGAAAATCGTGTTAAAATGTACTTGCTTATTATTTTCATAAACGATTTTCTAAAATCCTTTa                                                                                                                                        <  2:396742/141‑1 (MQ=255)
    cAATCATCTTACGACGATTTTTAAATTTTGGAATTACTCGGCGTTGTTCTTTAGGAATATCAAAATGCTTTCCGTTTTTAGAAAATCGTGTTAAAATGTACTTGCTTATTATTTTCATAAACGATTTTCTAAAATCCTTTa                                                                                                                                        <  2:500937/141‑1 (MQ=255)
      ctcgtcTTACGACGATTTTTAAATTTTGGAATTACTCGGCGTTGTTCTTTAGGAATATCAAAATGCTTTCCGTTTTTAGAAAATCGTGTTAAAATGTACTTGCTTATTATTTTCATAAACGATTTTCTAAAATCCTTTACg                                                                                                                                      <  2:905913/137‑1 (MQ=255)
       tcatcTTACGTTGAGGTGTAAATTTTATTTTTACTCGGCGTTGTTCTTTAGGAATATCAAAATGCTTTCCGTTTTTAGAAAATCTTGTTTTAATAGACTTGCTTAGTAATGTCATAAACGATTTTCTAAAATCCTTTACgt                                                                                                                                     <  2:482202/141‑2 (MQ=255)
                gacgaTTTTTAAATTTTGGAATTACTCGGCGTTGTTCTTTAGGAATATCAAAATGCTTTCCGTTTTTAGAAAATCGTGTTAAAATGTACTTGCTTATTATTTTCATAAACGATTTTCTAAAATCCTTTACGAAATTTTtaa                                                                                                                            <  2:948632/141‑1 (MQ=255)
                  cgaggtttAAATTTTGGAATTACTCGGCGTTGTTCTTTAGGAATATCAAAATGCTTTCCGTTTTTTAGAAAATCGTGTTAAAATGTACTTGCTTATTATTTTCATAAACGATTTTCTAAAATACTTTAAACAATTTAtaat                                                                                                                           >  2:762986/6‑141 (MQ=255)
                  cgaTTTTTAAATTTTGGAATTACTCGGCGTTGTTCTTTAGGAATATCAAAATGCTTTCCGTTTTTAGAAAATCGTGTTAAAATGTACTTGCTTATTATTTTCATAAACGATTTTCTAAAATCCTTTACGAAATTTTtaata                                                                                                                          <  1:917057/141‑1 (MQ=255)
                     tttttAAATTTTGGAATTACTCGGCGTTGTTCTTTAGGAATATCAAAATGCTTTCCGTTTTTAGAAAATCGTGTTAAAATGTACTTGCTTATTATTTTCATAAACGATTTTCTAAAATCCTTTACGAAATTTTTAATaaaa                                                                                                                       <  1:56645/141‑1 (MQ=255)
                     tttttAAATTTTGGAATTACTCGGCGTTGTTCTTTAGGAATATCAAAATGCTTTCCGTTTTTAGAAAATCGTGTTAAAATGTACTTGCTTATTATTTTCATAAACGATTTTCTAAAATCCTTTACGAAATTTTTAATaaaa                                                                                                                       >  1:908020/1‑141 (MQ=255)
                       tttAAATTTTGGAATTACTCGGCGTTGTTCTTTAGGAATATCAAAATGCTTTCCGTTTTTAGAAAATCGTGTTAAAATGTACTTGCTTATTATTTTCATAAACGATTTTCTAAAATCCTTTACGAAATTTTTAATAAAAAt                                                                                                                     <  2:450700/141‑1 (MQ=255)
                       tttAAATTTTGGAATTACTCGGCGTTGTTCTTTAGGAATATCAAAATGCTTTCCGTTTTTAGAAAATCGTGTTAAAATGTACTTGCTTATTATTTTCATAAACGATTTTCTAAAATCCTTTACGAAATTTTTAATAAAAAt                                                                                                                     <  1:616862/141‑1 (MQ=255)
                       tttAAATTTTGGAATTACTCGGCGTTGTTCTTTAGGAATATCAAAATGCTTTCCGTTTTTAGAAAATCGTGTTAAAATGTACTTGCTTATTATTTTCATAAACGATTTTCTAAAATCCTTTACGAAATTTTAAATAAAAAt                                                                                                                     <  1:851095/141‑1 (MQ=255)
                         tAAATTTTGGAATTACTCGGCGTTGTTCTTTAGGAATATCAAAATGCTTTCCGTTTTTAGAAAATCGTGTTAAAATGTACTTGCTTATTATTTTCATCAACGATTTTCTAAAATCCTTTACGAAATTTTTAATAAAAATca                                                                                                                   >  2:697315/1‑141 (MQ=255)
                         tAAATTTTGGAATTACTCGGCGTTGTTCTTTAGGAATATCAAAATGCTTTCCGTTTTTAGAAAATCGTGTTAAAATGTACTTGCTTATTATTTTCATAAACGATTTTCTAAAATCCTTTACGAAATTTTTAATAAAAATca                                                                                                                   >  2:401278/1‑141 (MQ=255)
                               ttGGAATTACTCGGCGTTGTTCTTTAGGAATATCAAAATGCTTTCCGTTTTTAGAAAATCGTGTTAAAATGTACTTGCTTATTATTTTCATAAACGATTTTCTAAAATCCTTTACGAAATTTTTAATAAAAATCACATccc                                                                                                             <  2:308005/141‑1 (MQ=255)
                                 ggAATTACTCGGCGTTGTTCTTTAGGAATATCAAAATGCTTTCCGTTTTTAGAAAATCGTGTTAAAATGTACTTGCTTATTATTTTCATAAACGATTTTCTAAAATCCTTTACGAAATTTTTAATAAAAATCACATCCCAg                                                                                                           <  1:518345/141‑1 (MQ=255)
                                 ggAATTACTCGGCGTTGTTCTTTAGGAATATCAAAATGCTTTCCGTTTTTAGAAAATCGTGTTAAAATGTACTTGCTTATTATTTTCATAAACGATTTTCTAAAATCCTTTACGAAATTCTTAATAAAAATCACATCCCAg                                                                                                           <  1:474990/141‑1 (MQ=255)
                                  gAATTACTCGGCGTTGTTCTTTAGGAATATCAAAATGCTTTCCGTTTTTAGAAAATCGTGTTAAAATGTACTTGCTTATTATTTTCATAAACGATTTTCTAAAATCCTTTACGAAATTTTTAATAAAAATCACATCCCAGt                                                                                                          <  1:856249/141‑1 (MQ=255)
                                    aTTACTCGGCGTTGTTCTTTTGGAATATCAAAATGCTTTCCGTTTTTAGAAAATCGTGTTAAAATGTACTTGCTTATTATTTTCATAAACGATTTTCTAAAATCCTTTACGAAATTTTTAATAAAAATCACATCCCAGTTa                                                                                                        <  1:342987/141‑1 (MQ=255)
                                     ttACTCGGCGTTGTTCTTTAGGAATATCAAAATGCTTTCCGTTTTTAGAAAATCGTGTTAAAATGTACTTGCTTATTATTTTCATAAACGATTTTCTAAAATCCTTTACGAAATTTTTAATAAAAATCACATCCCAGTTAt                                                                                                       <  1:644578/141‑1 (MQ=255)
                                      tACTCGGCGTTGTTCTTTAGGAATATCAAAATGCTTTCCGTTTTTAGAAAATCGTGTTAAAATGTACTTGCTTATTATTTTCATAAACGATTTTCTAAAATCCTTTACGAAATTTTTAATAAAAATCACATCCCAGTTAtt                                                                                                      <  1:573898/141‑1 (MQ=255)
                                      tACTCGGCGTTGTTCTTTAGGAATATCAAAATGCTTTCCGTTTTTAGAAAATCGTGTTAAAATGTACTTGCTTATTATTTTCATAAACGATTTTCTAAAATCCTTTACGAAATTTTTAATAAAAATCACATCCCAGTTAtt                                                                                                      <  1:136156/141‑1 (MQ=255)
                                       aCTCGGCGTTGTTCTTTAGGAATATCAAAATGCTTTCCGTTTTTAGAAAATCGTGTTAAAATGTACTTGCTTATTATTTTCATAAACGATTTTCTAAAATCCTTTACGAAATTTTTAATAAAAATCACATCCCAGTTAttt                                                                                                     <  1:819960/141‑1 (MQ=255)
                                       aCTCGGCGTTGTTCTTTAGGAATATCAAAATGCTTTCCGTTTTTAGAAAATCGTGTTAAAATGTACTTGCTTATTATTTTCATAAACGATTTTCTAAAATCCTTTACGAAATTTTTAATAAAAATCACATCCCAGTTAttt                                                                                                     <  1:585478/141‑1 (MQ=255)
                                       aCTCGGCGTTGTTCTTTAGGAATATCAAAATGCTTTCCGTTTTTAGAAAATCGTGTTAAAATGTACTTGCTTATTATTTTCATAAACGATTTTCTAAAATCCTTTACGAAATTTTTAATAAAAATCACATCCCAGTTAttt                                                                                                     >  2:373335/1‑141 (MQ=255)
                                       aCTCGGCGTTGTTCTTTAGGAATATCAAAATGCTTTCCGTTTTTAGAAAATCGTGTTAAAATGTACTTGCTTATTATTTTCATAAACGATTTTCTAAAATCCTTTACGAAATTTTTAATAAAAATCACATCCCAGTTAttt                                                                                                     <  1:948349/141‑1 (MQ=255)
                                         tCGGCGTTGTTCTTTAGGAATATCAAAATGCTTTCCGTTTTTAGAAAATCGTGTTAAAATGTACTTGCTTATTATTTTCATAAACGATTTTCTAAAATCCTTTACGAAATTTTTAATAAAAATCACATCCCAGTTAttttt                                                                                                   >  1:724869/1‑141 (MQ=255)
                                            gCGTTGTTCTTTAGGAATATCAAAATGCTTTCCGTTTTTAGAAAATCGTGTTACAATGTACTTGCTTATTATTTTCATAAACGATTTTCTAAAATCCTTTACGAAATTTTTAATAAAAATCACATCCCAGTTATTTTTTTa                                                                                                >  2:361221/1‑141 (MQ=255)
                                            gCGTTGTTCTTTAGGAATATCAAAATGCTTTCCGTTTTTAGAAAATCGTGTTAAAATGTACTTGCTTATTATTTTCATAAACGATTTTCTAAAATCCTTTACGAAATTTTTAATAAAAATCACATCCCAGTTATTTTTTTa                                                                                                >  1:826063/1‑141 (MQ=255)
                                            gCGTTGTTCTTTAGGAATATCAAAATGCTTTCCGTTTTTAGAAAATCGTGTTAAAATGTACTTGCTTATTATTTTCATAAACGATTTTCTAAAATCCTTTACGAAATTTTTAATAAAAATCACATCCCAGTTATTTTTTTa                                                                                                >  2:403460/1‑141 (MQ=255)
                                              gttgttCTTTAGGAATATCAAAATGCTTTCCGTTTTTAGAAAATCGTGTTAAAATGTACTTGCTTATTATTTTCATAAACGATTTTCTAAAATCCTTTACGAAATTTTTAATAAAAATCACATCCCAGTTATTTTTTTAac                                                                                              <  1:819698/141‑1 (MQ=255)
                                              gttgttCTTTAGGAATATCAAAATGCTTTCCGTTTTTAGAAAATCGTGTTAAAATGTACTTGCTTATTATTTTCATAAACGATTTTCTAAAATCCTTTACGAAATTTTTAATAAAAATCACATCCCAGTTATTTTTTTAac                                                                                              <  1:934315/141‑1 (MQ=255)
                                               ttgttCTTTAGGAATATCAAAATGCTTTCCGTTTTTAGAAAATCGTGTTAAAATGTACTTGCTTATTATTTTCATAAACGATTTTCTAAAATCCTTTACGAAATTTTTAATAAAAATCACATCCCAGTTATTTTTTTAaca                                                                                             <  2:470415/141‑1 (MQ=255)
                                                tgttCTTTAGGAATATCAACTGGCTTTCCGTTTTTAGAAAATCGTGTTAAAATGTACTTGCTTATTATTTTCATAAACGATTTTCTAAAATCCTTTACGAAATTTTTAATAAAAATCACATCCCAGTTATCTTTTTAacac                                                                                            <  1:496065/141‑1 (MQ=255)
                                                tgttCTTTAGGAATATCAAAATGCTTTCCGTTTTTAGAAAATCGTGTTAAAATGTACTTGCTTATTATTTTCATAAACGATTTTCTAAAATCCTTTACGAAATTTTTAATAAAAATCACATCCCAGTTATTTTTTTAacac                                                                                            <  1:383339/141‑1 (MQ=255)
                                                  ttCTTTAGGAATATCAAAATGCTTTCCGTTTTTAGAAAATCGTGTTAAAATGTACTTGCTTATTATTTTCATAAACGATTTTCTAAAATCCTTTACGAAATTTTTAATAAAAATCACATCCCAGTTATTTTTTTAACACtt                                                                                          >  1:135529/1‑141 (MQ=255)
                                                    cTTTAGGAATATCAAAATGCTTTCCGTTTTTAGAAAATCGTGTTAAAATGTACTTGCTTATTATTTTCATAAACGATTTTCTAAAATCCTTTACGAAATTTTTAATAAAAATCACATCCCAGTTATTTTTTTAACACTTAt                                                                                        >  2:341758/1‑141 (MQ=255)
                                                      ttAGGAATATCAATATGCTTTCCGTTTTTAGAAACTCGTGTTAAAATGTACGTGCTTATTATTGTCATAAACGATTTTCTAAAATCCTTTACGAAACTTTTAATAAAAATCACATCCCGGTTATTTCTTTACCACTTctct                                                                                      <  2:629048/141‑1 (MQ=255)
                                                       tAGGAATATCAAAATGCTTTCCGTTTTTAGAAAATCGTGTTAAAATGTACTTGCTTATTATTTTCATAAACGATTTTCTAAAATCCTTTACGAAATTTTTAATAAAAATCACATCCCAGTTATTTTTTTAACACTTATCtt                                                                                     >  1:717848/1‑141 (MQ=255)
                                                       tAGGAATATCAAAATGCTTTCCGTTTTTAGAAAATCGTGTTAAAATGTACTTGCTTATTATTTTCATAAACGATTTTCTAAAATCCTTTACGAAATTTTTAATAAAAATCACATCCCAGTTATTTTTTTAACACTTATCtt                                                                                     >  1:506143/1‑141 (MQ=255)
                                                          gAATATCAAAATGCTTTCCGTTTTTAGAAAATCGTGTTAAAATGTACTTGCTTATTATTTTCATAAACGATTTTCTAAAATCCTTTACGAAATTTTTAATAAAAATCACATCCCAGTTATTTTTTTAACACTTATCTTTTg                                                                                  >  1:9234/1‑141 (MQ=255)
                                                             tatCAAAATGCTTTCCGTTTTTAGAAAATCGTGTTAAAATGTACTTGCTTATTATTTTCATAAACGATTTTCTAAAATCCTTTACGAAATTTTTAATAAAAATCACATCCCAGTTATTTTTTTAACACTTATCTTTTGATa                                                                               <  2:250562/141‑1 (MQ=255)
                                                               tCAAAATGCTTTCCGTTTTTAGAAAATCGTGTTAAAATGTACTTGCTTATTATTTTAATAAACGATTTTCTAAAATCCTTTACGAAATTTTTAATAAAAATCACATCCCAGTTATTTTTTTAACACTTATCTTTTGATAAg                                                                             >  1:949856/1‑141 (MQ=255)
                                                                 aaaaTGCTTTCCGTTTTTAGAAAATCGTGTTAAAATGTACTTGCTTATTATTTTCATAAACGATTTTCTAAAATCCTTTACGAAATTTTTAATAAAAATCACATCCCAGTTATTTTTTTAACACTTATCTTTTGATAAGTg                                                                           <  2:785762/141‑1 (MQ=255)
                                                                   aaTGCTTTCCGTTTTTAGAAAATCGTGTTAAAATGTACTTGCTTATTATTTTCATAAACGATTTTCTAAAATCCTTTACGAAATTTTTAATAAAAATCACATCCCAGTTATTTTTTTAACACTTATCTTTTGATAAGTGCt                                                                         <  2:65785/141‑1 (MQ=255)
                                                                   aaTGCTTTCCGTTTTTAGAAAATCGTGTTAAAATGTACTTGCTTATTATTTTCATAAACGATTTTCTAAAATCCTTTACGAAATTTTTAATAAAAATCACATCCCAGTTATTTTTTTAACACTTATCTTTTGATAAGTGCt                                                                         <  1:561780/141‑1 (MQ=255)
                                                                    aTGCTTTCCGTTTTTAGAAAATCGTGTTAAAATGTACTTGCTTATTATTTTCATAAACGATTTTCTAAAATCCTTTACGAAATTTTTAATAAAAATCACATCCCAGTTATTTTTTTAACACTTATCTTTTGATAAGTGCtt                                                                        <  1:262475/141‑1 (MQ=255)
                                                                           ccGTTTTTAGAAAATCGTGTTAAAATGTACTTGCTTATTATTTTCATAAACGATTTTCTAAAATCCTTTACGAAATTTTTAATAAAAATCACATCCCAGTTATTTTTTTAACACTTATCTTTTGATAAGTGCTTTTTTTGt                                                                 <  1:650899/141‑1 (MQ=255)
                                                                             gTTTTTAGAAAATCGTGTTAAAATGTACTTGCTTATTATTTTCATAAACGATTTTCTAAAATCCTTTACGAAATTTTTAATAAAAATCACATCCCAGTTATTTTTTTAACACTTATCTTTTGATAAGTGCTTTTTTTGttt                                                               >  1:564953/1‑141 (MQ=255)
                                                                             gTTTTTAGAAAATCGTGTTAAAATGTACTTGCTTATTATTTTCATAAACGATTTTCTAAAATCCTTTACGAAATTTTTAATAAAAATCACATCCCAGTTATTTTTTTAACACTTATCTTTTGATAAGTGCTTTTTTTGttt                                                               <  2:896367/141‑1 (MQ=255)
                                                                             gTTTTTAGAAAAACGTGTTAAAATGTACTTGCTTATTATTTTCATAAACGATTTTCTAAAATGCTTTACGAAAAAAATAATAAAAATCACATCCCAGTTATTTTTTTAACACTTATCTTTTGATAAGTGCTTTTTTTGttt                                                               <  2:511008/141‑1 (MQ=255)
                                                                                  ttAGAAAATCGTGTTAAAATGTACTTGCTTATTATTTTCATAAACGATTTTCTAAAATCCTTTACGAAATTTTTAATAAAAATCACATCCCAGTTATTTTTTTAACACTTATCTTTTGATAAGTGCTTTTTTTTTTTTaaa                                                           >  2:800821/1‑141 (MQ=255)
                                                                                  ttAGAAAATCGTGTTAAAATGTACTTGCTTATTATTTTCATAAACGATTTTCTAAAATCCTTTACGAAATTTTTAATAAAAATCACATCCCAGTTATTTTTTTAACACTTATCTTTTGATAAGTGCTTTTTTTGTTTTaaa                                                           <  1:98986/141‑1 (MQ=255)
                                                                                  ttAGAAAATCGTGTTAAAATGTACTTGCTTATTATTTTCATAAACGATTTTCTAAAATCCTTTACGAAATTTTTAATAAAAATCACATCCCAGTTATTTTTTTAACACTTATCTTTTGATAAGTGCTTTTTTTGTTTTaaa                                                           <  1:325518/141‑1 (MQ=255)
                                                                                     gAAAATCGTGTTAAAATGTACTTGCTTATTATTTTCATAAACGATTTTCTAAAATCCTTTACGAAATTTTTAATAAAAATCACATCCCAGTTATTTTTTTAACACTTATCTTTTGATAAGTGCTTTTTTTGTTTTAAAGcc                                                        <  1:227194/141‑1 (MQ=255)
                                                                                     gAAAATCGAATTAAAATGTATCTACTTATTATTTTTATAAACGATTTTGTAAATTCCTTTACGAAATATTTAATAAAAATCACATACCTGTTCTTTTCTTAACACTTATCTTTTTATAAGTGCTTTTTTTGTTTTAAAGcc                                                        <  2:844183/141‑1 (MQ=255)
                                                                                      aaaaTCGTGTTAAAATGTACTTGCTTATTATTTTCATAAACGATTTTCTAAAATCCTTTACGAAATTTTTAATAAAAATCACATCCCAGTTATTTTTTTAACACTTATCTTTTGATAAGTGCTTTTTTTGTTTTAAAGCCt                                                       <  1:303724/141‑1 (MQ=255)
                                                                                      aaaaTCGTGTTAAAATGTACTTGCTTATTATTTTCATAAACGATTTTCTAAAATCCTTTACGAAATTTTTAATAAAAATCACATCCCAGTTATTTTTTTAACACTTATCTTTTGATAAGTGCTTTTTTTGTTTTAAAGCCt                                                       >  1:136961/1‑141 (MQ=255)
                                                                                       aaaTCGTGTTAAAATGTACTTGCTTATTATTTTCATAAACGATTTTCTAAAATCCTTTACGAAATTTTTAATAAAAATCACATCCCAGTTATTTTTTTAACACTTATCTTTTGATAAGTGCTTTTTTTGTTTTAAAGCCTc                                                      <  1:823865/141‑1 (MQ=255)
                                                                                        aaTCGTGTTAAAATGTACTTGCTTATTATTTTCATAAACGATTTTCTAAAATCCTTTACGAAATTTTTAATAAAAATCACATCCCAGTTATTTTTTTAACACTTATCTTTTGATAAGTGCTTTTTTTGTTTTatatctttt                                                     >  2:670748/1‑133 (MQ=255)
                                                                                        aaTCGTGTTAAAATGTACTTGCTTATTATTTTCATAAACGATTTTCTAAAATCCTTTACGAAATTTTTAATAAAAATCACATCCCAGTTATTTTTTTAACACTTATCTTTTGATAAGTGCTTTTTTTGTTTTAAAGCCTcc                                                     >  2:670759/1‑141 (MQ=255)
                                                                                                 aaaaTGTACTTGCTTATTATTTTCATAAACGATTTTCTAAAATCCTTTACGAAATTTTTAATAAAAATCACATCCCAGTTATTTTTTTAACACTTATCTTTTGATAAGTGCTTTTTTTGTTTTAAAGCCTCCAAATAATGa                                            <  2:455748/141‑1 (MQ=255)
                                                                                                  aaaTGTACTTGCTTATTATTTTCATAAACGATTTTCTAAAATCCTTTACGAAATTTTTAATAAAAATCACATCCCAGTTATTTTTTTAACACTTATCTTTTGATAAGTGCTTTTTTTGTTTTAAAGCCTCCAAATAATGAt                                           <  1:258917/141‑1 (MQ=255)
                                                                                                    aTGTACTTGCTTATTATTTTCATAAACGATTTTCTAAAATCCTTTACGAAATTTTTAATAAAAATCACATCCCAGTTATTTTTTTAACACTTATCTTTTGATAAGTGCTTTTTTTGTTTTAAAGCCTCCAAATAATGATTa                                         <  1:944727/141‑1 (MQ=255)
                                                                                                    aTGTACTTGCTTATTATTTTCATAAACGATTTTCTAAAATCCTTTACGAAATTTTTAATAAAAATCACATCCCAGTTATTTTTTTAACACTTATCTTTTGATAAGTGCTTTTTTTGTTTTAAAGCCTCCAAATAATGATTa                                         <  2:150364/141‑1 (MQ=255)
                                                                                                     tGTACTTGCTTATTATTTTCATAAACGATTTTCTAAAATCCTTTACGAAATTTTTAATAAAAATCACATCCCAGTTATTTTTTTAACACTTATCTTTTGATAAGTGCTTTTTTTGTTTTAAAGCCTCCAAATAATGATTaa                                        >  2:425859/1‑141 (MQ=255)
                                                                                                        aCTTGCTTATTATTTTCATAAACGATTTTCTAAAATCCTTTACGAAATTTTTAATAAAAATCACATCCCAGTTATTTTTTTAACACTTATCTTTTGATAAGTGCTTTTTTTGTTTTAAAGCCTCCAAATAATGATTAATTc                                     <  2:663907/141‑1 (MQ=255)
                                                                                                        aCTTGCTTATTATTTTCATAAACGATTTTCTAAAATCCTTTACGAAATTTTTAATAAAAATCACATCCCAGTTATTTTTTTAACACTTATCTTTTGATAAGTGCTTTTTTTGTTTTAAAGCCTCCAAATAATGATTAATTc                                     >  1:570939/1‑141 (MQ=255)
                                                                                                           tGCTTATTATTTTCATAAACGATTTTCTAAAATCCTTTACGAAATTTTTAATAAAAATCACATCCCAGTTATTTTTTTAac                                                                                              >  1:846440/1‑81 (MQ=255)
                                                                                                           tGCTTATTATTTTCATAAACGATTTTCTAAAATCCTTTACGAAATTTTTAATAAAAATCACATCCCAGTTATTTTTTTAac                                                                                              <  2:846440/81‑1 (MQ=255)
                                                                                                           tGCTTATTATTTTCATAAACGATTTTCTAAAATCCTTTACGAAATTTTTAATAAAAATCACATCCCAGTTATTTTTTTAACACTTATCTTTTGATAAGTGCTTTTTTTGTTTTAAAGCCTCCAAATAATGATTAATTCTAt                                  >  2:24761/1‑141 (MQ=255)
                                                                                                           tGCTTATTATTTTCATAAACGATTTTCTAAAATCCTTTACGAAATTTTTAATAAAAATCACATCCCAGTTATTTTTTTAACACTTATCTTTTGATAAGTGCTTTTTTTGTTTTAAAGCCTCCAAATAATGATTAATTCTAt                                  >  1:771340/1‑141 (MQ=255)
                                                                                                              ttattaTTTTCATAAACGATTTTCTAAAATCCTTTACGAAATTTTTAATAAAAATCACATCCCAGTTATTTTTTTAACACTTATCTTTTGATAAGTGCTTTTTTTGTTTTAAAGCCTCCAAATAATGATTAATTCTATTCg                               <  1:180644/141‑1 (MQ=255)
                                                                                                                     tttCATAAACGATTTTCTAAAATCCTTTACGAAATTTTTAATAAAAATCACATCCCAGTTATTTTTTTAACACTTATCTTTTGATAAGTGCTTTTTTTGTTTTAAAGCCTCCAAATAATGATTAATTCTATTCGTATGCtc                        >  2:709979/1‑141 (MQ=255)
                                                                                                                     tttCATAAACGATTTTCTAAAATCCTTTACGAAATTTTTAATAAAAATCACATCCCAGTTATTTTTTTAACACTTATCTTTTGATAAGTGCTTTTTTTGTTTTAAAGCCTCCAAATAATGATTAATTCTATTCGTATGCtc                        <  1:832286/141‑1 (MQ=255)
                                                                                                                        cATAAACGATTTTCTAAAATCCTTTACGAAATTTTTAATAAAAATCACATCCCAGTTATTTTTTTAACACTTATCTTTTGATAAGTGCTTTTTTTGTTTTAAAGCCTCCAAATAATGATTAATTCTATTCGTATGCtcatc                     <  1:231075/141‑1 (MQ=255)
                                                                                                                         aTAAACGATTTTCTAAAATCCTTTACGAAATTTTTAATAAAAATCACATCCCAGTTATTTTTTTAACACTTATCTTTTGATAAGTGCTTTTTTTGTTTTAAAGCCTCCAAATAATGATTAATTCTATTCGTATGCtcatca                    <  1:336281/141‑1 (MQ=255)
                                                                                                                         aTAAACGAATTTCTAAAATCCTTTACGAAATTTTTAATAAAAATCACATCCCAGCTATTTTTTTAACACTTATCTTTTGATAAGTGCTTTTTTTGTTTTAAAGCCTCCAAATAAGGATTAATTCTATTCGTATGCtcatca                    >  2:594600/1‑141 (MQ=255)
                                                                                                                              cGATTTTCTAAAATCCTTTACGAAATTTTTAATAAAAATCACATCCCAGTTATTTTTTTAACACTTATCTTTTGATAAGTGCTTTTTTTGTTTTTTATCTTCCAAATAATGATTAATTCTATTCGTATGCTCGTCATTaaa               >  2:199917/1‑141 (MQ=255)
                                                                                                                              cGATTTTCTAAAATCCTTTACGAAATTTTTAATAAAAATCACATCCCAGTTATTTTTTTAACACTTATCTTTTGATAAGTGCTTTTTTTGTTTTAAAGCCTCCAAATAATGATTAATTCTATTCGTATGCTCATCATTaaa               <  2:506143/141‑1 (MQ=255)
                                                                                                                               gATTTTCTAAAATCCTTTACGAAATTTTTAATAAAAATCACATCCCAGTTATTTTTTTAACACTTATCTTTTGATAAGTGCTTTTTTTGTTTTAATGCCTCCAAATAATGATTAATTCTATTCGTATGCTCATCATTAAAt              <  1:955906/141‑1 (MQ=255)
                                                                                                                               gATTTTCTAAAATCCTTTACGAAATTTTTAATAAAAATCACATCCCAGTTATTTTTTTAACACTTATCTTTTGATAAGTGCTTTTTTTGTTTTAAAGCCTCCAAATAATGATTAATTCTATTCGTATGCTCATCATTAAAt              <  2:469391/141‑1 (MQ=255)
                                                                                                                               gATTTTCTAAAATCCTTTACGAAATTTTTAATAAAAATCACATCCCAGTTATTTTTTTAACACTTATCTTTTGATAAGTGCTTTTTTTGTTTTAAAGCCTCCAAATAATGATTAATTCTATTCGTATGCTCATCATTAAAt              >  2:394060/1‑141 (MQ=255)
                                                                                                                                aTTTTCTAAAATCCTTTACGAAATTTTTAATAAAAATCACATCCCAGTTATTTTTTTAATACTTATCTTTTGATAAGTGCTTTTTTTGTTTTAAAGCCTCCAAATAATGATTAATTCTATTCGTCTGCTCATCATTAAAtt             >  2:268344/1‑141 (MQ=255)
                                                                                                                                aTTTTCTAAAATCCTTTACGAAATTTTTAATAAAAATCACATCCCAGTTATTTTTTTAACACTTATCTTTTGATAAGTGCTTTTTTTGTTTTAAAGCCTACAAATAATGATTAATTCTATTCGTATGCTCATCATTAAAtt             >  1:487619/1‑141 (MQ=255)
                                                                                                                                 ttttCTACAATCCTTTCCCACATTCTTCATCAAAATCACATCCCAGTTATTCTTCTCCAACTCATATTTAGAAATGTGATTTTTATGTTTTAAAGCCTCCAAATAATGATTAATTCTATTCGTATGCTCATCATTAAATtg            <  1:484391/141‑1 (MQ=255)
                                                                                                                                 ttttCTAAAATCCTTTACGAAATTTTTAATAAAAATCACATCCCAGTTATTTTTTTAACACTTATCTTTTGATAAGTGCTTTTTTTGTTTTAAAGCCTCCAAATAATGATTAATTCTATTCGTATGCTCATCATTAAATtg            <  2:898855/141‑1 (MQ=255)
                                                                                                                                 ttttCTAAAATCCTTTACGAAATTTTTAATAAAAATCACATCCCAGTTATTTTTTTAACACTTATCTTTTGATAAGTGCTTTTTTTGTTTTAAAGCCTCCAAATAATGATTAATTCTATTCGTATGCTCATCATTAAATtg            <  1:326598/141‑1 (MQ=255)
                                                                                                                                  tttCTAAAATCCTTTACGAAATTTTTAATAAAAATCACATCCCAGTTATTTTTTTAACACTTATCTTTTGATAAGTGCTTTTTTTGTTTTAAAGCCTCCAAATAATGATTAATTCTATTCGTATGCTCATCATTAAATtgt           >  1:571398/1‑141 (MQ=255)
                                                                                                                                  tttCTAAAATCCTTTACGAAATTTTTAATAAAAATCACATCCCAGTTATTTTTTTAACACTTATCTTTTGATAAGTGCTTTTTTTGTTTTAAAGCCTCCAAATAATGATTAATTCTATTCGTATGCTCATCATTAAATtgt           >  1:256250/1‑141 (MQ=255)
                                                                                                                                        aaaTCCTTTACGAAATTTTTAATAAAAATCACATCCCAGTTATTTTTTTAACACTTATCTTTTGATAAGTGCTTTTTTTGTTTTAAAGCCTCCAAATAATGATTAATTCTATTCGTATGCTCATCATTAAATTGTGAATgc     >  1:237499/1‑141 (MQ=255)
                                                                                                                                        aaaTCCTTTACGAAATTTTTAATAAAAATCACATCCCAGTTATTTTTTTAACACTTATCTTTTGATAAGTGCTTTTTTTGTTTTAAAGCCTCCAAATAATGATTAATTCTATTCGTATGCTCATCATTAAATTGTGAATgc     >  1:223695/1‑141 (MQ=255)
                                                                                                                                          aTCCTTTACGAAATTTTTAATAAAAATCACATCCCAGTTATTTTTTTAACACTTATCTTTTGATAAGTGCTTTTTTTGTTTTAAAGCCTCCAAATAATGATTAATTCTATTCGTATGCTCATCATTAAATTGTGAATgcgc   <  2:347173/141‑1 (MQ=255)
                                                                                                                                          aTCCTTTACGAAATTTTTAATAAAAATCACATCCCAGTTATTTTTTTAACACTTATCTTTTGATAAGTGCTTTTTTTGTTTTAAAGCCTCCAAATAATGATTAATTCTATTCGTATGCTCATCATTAAATTGTGAATgcgc   <  1:125439/141‑1 (MQ=255)
                                                                                                                                           tCCTTTACGAAATTTTTAATAAAAATCACATCCCAGTTATTTTTTTAACACTTATCTTTTGATAAGTGCTTTTTTTGTTTTAAAGCCTCCAAATAATGATTAATTCTATTCGTATGCTCATCATTAAATTGTGAATGCGCt  <  2:408454/141‑1 (MQ=255)
                                                                                                                                           |                                                                                                                                            
ATTACAATCATCTTACGACGATTTTTAAATTTTGGAATTACTCGGCGTTGTTCTTTAGGAATATCAAAATGCTTTCCGTTTTTAGAAAATCGTGTTAAAATGTACTTGCTTATTATTTTCATAAACGATTTTCTAAAATCCTTTACGAAATTTTTAATAAAAATCACATCCCAGTTATTTTTTTAACACTTATCTTTTGATAAGTGCTTTTTTTGTTTTAAAGCCTCCAAATAATGATTAATTCTATTCGTATGCTCATCATTAAATTGTGAATGCGCT  >  CP000730/691700‑691978

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.