New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	1325375 =	31 (0.820)	3 (0.080)	3/258	6.1	8.3%	coding (132/543 nt)	glpP	glycerol uptake operon antiterminator
	?	CP000730	1325473 =	37 (1.040)					coding (230/543 nt)	glpP	glycerol uptake operon antiterminator
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GCTTTTTTTATTACTTTAGATTTAGTCGATACGATACCTTTTGGCTTGTATTGCTGAATAATAAATTCACTTGCAAATTCATCGTGGCTTAAACCTTTTATCAAATCTATATGAATAAAACACTCTATATGATTTTGCTTCAGCAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP000730/1325521‑1325375 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcagcaatACAAGCCAAAAGGTATCGTATCGACTAAATCTAAAGTAATAAAAAAAGCTAAATCATTAAATACTTTAACGATTTTTAGAGTATTTATTATTGATAGTCAAGCATTGAAACGCAGTATAGATTTGATAAAAAAAGTTGAA  >  CP000730/1325473‑1325612                                                                                                                                                                                                                                                                                                 GCTTTTTTTATTACTTTAGATTTAGTCGATACGATACCTTTTGGCTTGTATTGCTGAATAATAAATTCACTTGCAAATTCATCGTGGCTTAAACCTTTTATCAAATCTATATGAATAAAACACTCTATATGATTTTGCTTC                                                                                                                                                    <  2:401598/141‑1  CTTTTTTTATTACTTTAGATTTAGTCGATACGATACCTGTTGGCTTGTATTGCTGAATAATAAATTCACTTACAAATTCATCGTGGCTTAAACCTTTTATCAAATCTTTATGAATAAAACACTCTATATGATTTTGCTTCA                                                                                                                                                   <  2:358899/141‑1    TTTTTTATTACTTTAGATTTAGTCGATACGATACCTTTTGGCTTGTATTGCTGAATAATAAATTCACTTGCAAATTCATCGTGGCTTAAACCTTTTATCAAATCTATATGAATAAAACACTCTATATGATTTTGCTTCAGC                                                                                                                                                 <  2:3957/141‑1                                                     GCTGAATAATAAATTCACTTGCAAATTCATCGTGGCTTAAACCTTTTATCAAATCTATATGAATAAAACACTCTATATGATTTTGCTTCAGCAATACAAGCCAAAAGGTATCGTATCGACTAAATCTAAAGTAATAAAAAA                                                                                                >  2:394/1‑141                                                      CTGAATAATAAATTCACTTGCAAATTCATCGTGGCTTAAACCTTTTATCAAATCTATATGAATAAAACACTCTATATGATTTTGCTTCAGCAATACAAGCCAAAAGGTATCGTATCGACTAAATCTAAAGTAATAAAAAAA                                                                                               >  2:62630/1‑141                                                                                                        AATCTATATGAATAAAACACTCTATATGATTTTGCTTCAGCAATACAAGCCAAAAGGTATCGTATCGACTAAATCTAAAGTAATAAAAAAAGCTAAATCATTAAATACTTTAACGATTTTTAGAGTATTTATTATTGATAG                                             <  1:394/141‑1                                                                                                                                           TTCAGCAATACAAGCCAAAAGGTATCGTATCGACTAAATCTAAAGTAATAAAAAAAGCTAAATCATTAAATACTTTAACGATATTTAGATTATTTATTATTGATAGTCAAGCATTTAAACGCAGAAAAGATTTGATAAAAA          >  1:228145/1‑141                                                                                                                                                CAATACAAGCCAAAAGGTATCGTATCGACTAAATCTAAAGTAATAAAAAAAGCTAAATCATTAAATACTTTAACGATTTTTAGAGTATTTATTATTGATAGTCAAGCATTGAAACGCAGTATAGATTTGATAAAAAAAGTT     >  1:116686/1‑141                                                                                                                                                CAATACAAGCCAAAAGGTATCGTATCGACTAAATCTAAAGTAATAAAAAAAGCTAAATCATTAAATACTTTAACGATTTTTAGAGTATATATTATTGATAGTCAAGCATTGAAACGCACTATAGATTTGATAAACAAtgat     >  1:331592/1‑137                                                                                                                                                   TACAAGCCAAAAGGTATCGTATCGACTAAATCTAAAGTAATAAAAAAAGCTAAATCATTAAATACTTTAACGATTTTTAGAGTATTTATTATTGATAGTCAAGCATTGAAACGCAGTATAGATTTGATAAAAAAAGTTGAA  >  2:303189/1‑141                                                                                                                                                                                                                                                                                                 GCTTTTTTTATTACTTTAGATTTAGTCGATACGATACCTTTTGGCTTGTATTGCTGAATAATAAATTCACTTGCAAATTCATCGTGGCTTAAACCTTTTATCAAATCTATATGAATAAAACACTCTATATGATTTTGCTTCAGCAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP000730/1325521‑1325375 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcagcaatACAAGCCAAAAGGTATCGTATCGACTAAATCTAAAGTAATAAAAAAAGCTAAATCATTAAATACTTTAACGATTTTTAGAGTATTTATTATTGATAGTCAAGCATTGAAACGCAGTATAGATTTGATAAAAAAAGTTGAA  >  CP000730/1325473‑1325612

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.