New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	1325375 =	31 (0.820)	3 (0.080)	3/258	6.1	8.3%	coding (132/543 nt)	glpP	glycerol uptake operon antiterminator
	?	CP000730	1325473 =	37 (1.040)					coding (230/543 nt)	glpP	glycerol uptake operon antiterminator
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

AGAGGATGAATCAAGTGAATAACAACATATTGCCTGCTATAAGAAACATTAAAGATTTAGAGAAACTGATTAAAACAGACTATAAAATGTGTGTGCTTCTAGATATGCATATAGGACATATAAAAAGTATTATGGAATTGCTGAAGCAAAATCATATAGAGTGTTTTATTCATATAGATTTGATAAAAGGTTTAAGCCACGATGAATTTGCAAGTGAATTTATTATTCAGCAATACAAGCCAAAAGGTATCGTATCGACTAAATCTAAAGTA  >  CP000730/1325239‑1325510                                                                                                                                         |                                                                                                                                        agagGATGAATCAAGTGAATAACAACATATTGCCTGCTATAAGAAACATTAAAGATTTAGAGAAACTGATTAAAACAGACTATAAAATGTGTGTGCTTCTAGATATGCATATAGGACATATAAAAAGTATTATGGAATTGc                                                                                                                                     <  2:390864/141‑1 (MQ=255)     gATGAATCAAGTGAATACCGACATGTTGCCTGCGATAAGAAACATTAAAGATTTAGAGAAACTGATTAAAACAGACTATAAAATGTGTGTGCTTCTAGATATGCATATAGGACATATAAAAAGTATTATGGAATTGCTGaa                                                                                                                                 >  2:207081/1‑141 (MQ=255)                 gAATAACAACATATTGCCTGCTATAAGAAACATTAAAGATTTAGAGAAACTGATTAAAACAGACTATAAAATGTGTGTGCTTCTAGATATGCATATAGGACATATAAAAAGTATTATGGAATTGCTGAAGCAAAATCatat                                                                                                                     >  1:354324/1‑141 (MQ=255)                   aTAACAACATATTGCCTGCTATAAGAAACATTAAAGATTTAGAGAAACTGATTAAAACAGACTATAAAATGTGTGTGCTTCTAGATATGCATATAGGACATATAAAAAGTATTATGGAATTGCTGAAGCAAAATCATATag                                                                                                                   <  1:371653/141‑1 (MQ=255)                        aacaTATTGCCTGCTATAAGAAACATTAAAGATTTAGAGAAACTGATTAAAACAGACTATAAAATGTGTGTGCTTCTAGATATGCATATAGGACATATAAAAAGTATTATGGAATTGCTGAAGCAAAATCATATAGAgtgt                                                                                                              >  1:176827/1‑141 (MQ=255)                        aacaTATTGCCTGCCATAAGAAACATTAAAGATTTAGGGAAACTGATTAAAACAGACTATAAAATGTGTGTGCTTCTAGATATGCATATAGGACATATAAAAAGTATTATGGAATTGCTGAAGCAAAATCATATGGAgtgt                                                                                                              <  2:340432/141‑1 (MQ=255)                                   tGCTATAAGAAACATTAAAGATTTAGAGAAACTGATTAAAACAGACTATAAAATGTGTGTGCTTCTAGATATGCATATAGGACATATAAAAAGTATTATGGAATTGCTGAAGCAAAATCAGATAGAGTGTTTTATTCatat                                                                                                   <  2:249077/141‑1 (MQ=255)                                      tataAGAAACATTAAAGATTTAGAGAAACTGATTAAAACAGACTATAAAATGTGTGTGCTTCTAGATATGCATATAGGACATATAAAAAGTATTATGGAATTGCTGAAGCAAAATCATATAGAGTGTTTTATTCATATAGa                                                                                                <  1:282221/141‑1 (MQ=255)                                        aaaGAAACATTAAAGATTTAGAGAAACTGATTAAAACAGACTATAAAATGTGTGTGATTCTAGATATGCATATAGGACATATAAAAAGTATTATGGAATTGCTGAAGCAAAATCATATAGAGTGTTTTATTCataaaataa                                                                                              <  2:350070/140‑7 (MQ=255)                                          aGAAACATTAAAGATTTAGAGAAACTGATTAAAACAGACTATAAAATGTGTGTGCTTCTAGATATGCATATAGGACATATAAAAAGTATTATGGAATTGCTGAAGCAAAATCATATAGAGTGTTTTATTCATATAGAttta                                                                                            >  2:60820/1‑140 (MQ=255)                                          aGAAACATTAAAGATTTAGAGAAACTGATTAAAACAGACTATAAAATGTGTGTGCTTCTAGATATGCATATAGGACATATAAAAAGTATTATGGAATTGCTGAAGCAAAATCATATAGAGTGTTTTATTCATATAGATTTg                                                                                            >  2:265923/1‑141 (MQ=255)                                          aGAAACATTAAAGATTTAGAGAAACTGATTAAAACAGACTATAAAATGTGTGTGCTTCTAGATATGCATATAGGACATATAAAAAGTATTATGGAATTGCTGAAGCAAAATCATATAGAGTGTTTTATTCATATAGATTTg                                                                                            >  2:288982/1‑141 (MQ=255)                                              aCATTAAAGATTTAGAGAAACAGATTAAAACAGACTATAAAATGTGTGTGCTTCTACATAAGCAAAAAAAAAAAAAAAAAAGTATTATGGAATTGCTGAAGCAAAATCATATAGAGTGTTTTATTCATATAGATTTGATaa                                                                                        <  2:260408/141‑1 (MQ=255)                                               cATTAAAGATTTAGAGAAACTGATTAAAACAGACTATAAAATGTGTGTGCTTCTAGATATGCATCTAGGACATATAAAAAGTATTATGGAATTGCTGAAGCAAAATCATATAGAGTGTTTTATTCATATAGATTTGATaaa                                                                                       <  1:288982/141‑1 (MQ=255)                                                aTTAAAGATTTAGAGAAACTGATTAAAACAGACTATAAAATGTGTGTGCTTCTAGATATGCATATAGGACATATAAAAAGTATTATGGAATTGCTGAAGCAAAATCATATAGAGTGTTTTATTCATATAGATTTGATaaaa                                                                                      <  2:159460/141‑1 (MQ=255)                                                      gATTTAGAGAAACTGATTAAAACAGACTATAAAATGTGTGTGCTTCTAGATATGCATATAGGACATATAAAAAGTATTATGGAATTGCTGAAGCAAAATCATATAGAGTGTTTTATTCATATAGATTTGATAAAAGGTTTa                                                                                <  1:353717/141‑1 (MQ=255)                                                         ttAGAGAAACTGATTAAACCAGACTACAAAATGGGTGTGCTTCTAGATATGCATATAGGACATATAAAAAGTATTATGGAATTGCTGAAGCAAAATCATATAGAGTGTTTTATTCATATAGATTTGATAAAAGGTTTAAGc                                                                             >  2:207067/1‑141 (MQ=255)                                                                                cTATAAAATGTGTGTGCTTCTAGATATGCATATAGGACATATAAAAAGTATTATGGAATTGCTGAAGCAAAATCATATAGAGTGTTTTATTCATATAGATTTGATAAAAGGTTTAAGCCACGATGAATCTGCAAGTGAAtt                                                      >  2:334384/1‑141 (MQ=255)                                                                                     aaaTGTGTGTGCTTCTAGATATGCATATAGGACATATAAAAAGTATTATGGAATTGCTGAAGCAAAATCATATAGAGTGTTTTATTCATATAGATTTGATAAAAGGTTTAAGCCACGATGAATTTGCAAGTGAATttatta                                                 <  1:215192/141‑1 (MQ=255)                                                                                         gtgtgtgCTTCTAGATATGCATATAGGACATATAAAAAGTATTATGGAATTGCTGAAGCAAAATCCTATAGCGAGTTTTATTCATATAGATTTGATAAAAGGTTTAAGCCACGATGAATTTGCAAGTGAATTTATTATTCa                                             <  1:351237/141‑1 (MQ=255)                                                                                         gtgtgtgCTTCTAGATATGCATATAGAACATATAAAAAGTATTATGGAATTGCTGAAGCAAAATCATATAGAGTGTTTTATTCATATAGATTTGATAAAAGGTTTAAGCCACGATGAATTTGCAAGTGAATTTATTATTCa                                             <  2:301532/141‑1 (MQ=255)                                                                                              tgCTTCTAGATATGCATATAGGACATATAAAAAGTATTATGGAATTGCTGAAGCAAAATCATATAGAGTGTTTTATTCATATAGATTTGATAAAAGGTTTAAGCCACGATGAATTTGCAAGTGAATTTATTATTCAGCAAt                                        <  1:362897/141‑1 (MQ=255)                                                                                                     aGATATGCATATAAGAAATATAAAAAGTATTATGGAATTGCTGAAGCAAAATCATATAGAGTGTTTTATTCATATAGATTTGATAAAAGGTTTAAGCCACGATGAATTTGCAAGTGAATTTATTATTCAGCAATACAAGcc                                 <  2:174820/141‑1 (MQ=255)                                                                                                          tGCATATAGGACATATAAAAAGTATTATGGAATTGCTGAAGCAAAATCATATAGAGTGTTTTATTCATATAGATTTGATAAAAGGTTTAAGCCACGATGAATTTGCAAGTGAATTTATTATTCAGCAATACAAGCCAAAAg                            <  2:72464/141‑1 (MQ=255)                                                                                                           gCATATAGGACATATAAAAAGTATTATGGAATTGCTGAAGCAAAATCATATAGAGTGTTTTATTCATATAGATTTGATAAAAGGTTTAAGCCACGATGAATTTGCAAGTGAATTTATTATTCAGCAATACAAGCCAAAAgg                           <  1:415289/141‑1 (MQ=255)                                                                                                                  ggACATATAAAAAGTATTATGGAATTGCTGAAGCAAAATCATATAGAGTGTTTTATTCATATAGATTTGATAAAAGGTTTAAGCCACGATGAATTTGCAAGTGAATTTATTATTCAGCAATACAAGCCAAAAGgtatcgta                    >  2:297699/1‑141 (MQ=255)                                                                                                                        ataAAAAGTATTATGGAATTGCTGAAGCAAAATCATATAGAGTGTTTTATTCATATAGATTTGATAAAAGGTTTAAGCCACGATGAATTTGCAAGTGAATTTATTATTCAGCAATACAAGCCAAAAGGTATCGTATCGACt              <  2:279781/141‑1 (MQ=255)                                                                                                                          aaaaaGTATTATGGAATTGCTGAAGCAAAATCATATAGAGTGTTTTATTCATATAGATTTGATAAAAGGTTTAAGCCACGATGAATTTGCAAGTGAATTTATTATTCAGCAATACAAGCCAAAAGGTATCGTATCGACTaa            <  2:338628/141‑1 (MQ=255)                                                                                                                                    atGGAATTGCTGAAGCAAAATCATATAGAGTGTTTTATTCATATAGATTTGATAAAAGGTTTAAGCCACGATGAATTTGCAAGTGAATTTATTATTCAGCAATACAAGCCAAAAGGTATCGTATCGACTAAATCTAAAGta  >  1:286505/1‑141 (MQ=255)                                                                                                                                    atGGAATTGCTGAAGCAAAATCATATAGAGTGTTTTATTCATATAGATTTGATAAAAGGTTTAAGCCACGATGAATTTGCAAGTGAATTTATTATTCAGCAATACAAGCCAAAAGGTATCGTATCGACTAAATCTAAAGta  <  1:221246/141‑1 (MQ=255)                                                                                                                                    atGGAATTGCTGAAGCAAAATCATATAGAGTGTTTTATTCATATAGATTTGATAAAAGGTTTAAGCCACGATGAATTTGCAAGTGAATTTATTATTCAGCAATACAAGCCAAAAGGTATCGTATCGACTAAATCTAAAGta  <  1:248252/141‑1 (MQ=255)                                                                                                                                         |                                                                                                                                        AGAGGATGAATCAAGTGAATAACAACATATTGCCTGCTATAAGAAACATTAAAGATTTAGAGAAACTGATTAAAACAGACTATAAAATGTGTGTGCTTCTAGATATGCATATAGGACATATAAAAAGTATTATGGAATTGCTGAAGCAAAATCATATAGAGTGTTTTATTCATATAGATTTGATAAAAGGTTTAAGCCACGATGAATTTGCAAGTGAATTTATTATTCAGCAATACAAGCCAAAAGGTATCGTATCGACTAAATCTAAAGTA  >  CP000730/1325239‑1325510

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.