New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	= 1292768	33 (0.870)	4 (0.110)	4/262	5.6	11.9%	intergenic (+322/‑64)	infB/rbfA	translation initiation factor IF‑2/ribosome‑binding factor A
	?	CP000730	= 1292797	28 (0.780)					intergenic (+351/‑35)	infB/rbfA	translation initiation factor IF‑2/ribosome‑binding factor A
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

ATGTCGACTATTATTGGAAAATTTTCTGTTGAAATGCCTATCTTACGGCAAACTTTATTTGATTTTATAGGCTTAATTTATTAAAATAACGTGTGAGCTAAAATAATTGTTTAAGCATTGTTACACTAAAAAATGCAAATAACAATTGAACTTAAAGATAAAGAGGTGACAAGAATGAGCAGTATGAGAGCAGAGCGTGTTGGTGAACAAATGAAGAAGGAATTAATGGATATCATCAACAATAAAGTCAAAGATCCTCGAGTTGGTTTTATTACAATTA  >  CP000730/1292658‑1292937                                                                                                                                            |                                                                                                                                             aTGTCGACTATTATTGGAAACTTTTCTGTTGAAATGCCTATCTTACGGAAAACTTTATTTGATTTTATAGGCTTAATTTATTAAAATAACGTGTGAGCTAAAATAATTGTTTAAGCATTGTTACACTAAAAAATGCCAATa                                                                                                                                             <  2:22241/141‑1 (MQ=255) aTGTCGACTATTATTGGAAAATTTTCTGTTGAAATGCCTATCTTACGGCAAACTTTATTTGATTTTATAGGCTTAATTTATTAAAATAACGTGTGAGCTAAAATAATTGTTTAAGCATTGTTACACTAAAAAATGCAAATa                                                                                                                                             <  1:189812/141‑1 (MQ=255) aTGTCGACTATTATTGGAAAATTTTCTGTTGAAATGCCTATCTTACGGCAAACTTTATTTGATTTTATAGGCTTAATTTATTAAAATAACGTGTGAGCTAAAATAATTGTTTAAGCATTGTTACACTAAAAAATGCAAATa                                                                                                                                             <  1:347302/141‑1 (MQ=255)         tattatTGGAAAATTTTCTGTTGAAATGCCTATCTTACGGCAAACTTTATTTGATTTTATAGGCTTAATTTATTAAAATAACGTGTGAGCTAAAATAATTGTTTAAGCATTGTTACACTAAAAAATGCAAATAACAATTGa                                                                                                                                     >  1:107481/1‑141 (MQ=255)                ggAAAATTTTCTGTTGAAATGCCTATCTTACTGCAAACTTTATTTGATTTTATAAGCTTAATTTATTAAAATAACGTGTGAGCTAAAATAATTGTTTAAGCATTGTTACACTAAAAAATGCAAATAACAATTGAACTtaaa                                                                                                                              <  2:121947/141‑1 (MQ=255)                agAAAATTTTCTGTTGAAATGCCTATATTACGGCAAACTTTATATGATTTTATAGGCTTAATTTATTAAAATAACGTGTGAGCTAAAATAATTGTTTAAGAAAAAAAAAAAAAAAAAATGCAAATAACAATTGAACTtaaa                                                                                                                              <  2:30133/140‑1 (MQ=255)                       tttCTGTTGAAATGCCTATCTTACGGCAAACTTTATTTGATTTTATAGGCTTAATTTATTAAAATAACGTGTGAGCTAAAATAATTGTTTAAGCATTGTTACACTAAAAAATGCAAATAACAATTGAACTtaaagataaag                                                                                                                       <  2:165072/141‑1 (MQ=255)                        ttCTGTTGAAATGCCTATCTTACGGCAAACTTTATTTGATTTTATAGGCTTAATTTATTAAAATAACGTGTGAGCTAAAATAATTGTTTAAGCATTGTTACACTAAAAAATGCAAATAACAATTGAACTtaaagataaaga                                                                                                                      >  2:45946/1‑141 (MQ=255)                             ttGAAATGCCTATCTTACGGCAAACTTTATTTGATTTTATAGGCTTAATTTATTAAAATAACGTGTGAGCTAAAATAATTGTTTAAGCATAAAAAAAAAAAAAAATGCAAATAACAATTGAACTTAAAGATAAAGAGGTGa                                                                                                                 <  2:240218/141‑1 (MQ=255)                              tGAAATGCCTATCTTACGGCAAACTTTATTTGATTTTATAGGCTTAATTTATTAAAATAACGTGTGAGCTAAAATAATTGTTTAAGCATTGTTACACTAAAAAATGCAAATAACAATTGAACTTAAAGATAAAGAGGTGAc                                                                                                                <  2:27992/141‑1 (MQ=255)                                  aTGCCTATCTTACGGCAAACTTTATTTGATTTTATAGGCTTAATTTATTAAAATAACGTGTGAGCTAAAATAATTGTTTAAGCATTGTTACACTAAAAAATGCAAATAACAATTGAACTTAAAGATAAAGAGGTGACAAGa                                                                                                            <  1:223486/141‑1 (MQ=255)                                       tATCTTACGGCAAACTTTATTTGATTTTATAGGCTTAATTTATTAAAATAACGTGTGAGCTAAAATAATTGTTTAAGCATTGTTACACTAAAAAATGCAAATAACAATTGAACTTAAAGATAAAGAGGTGACAAGAATGAg                                                                                                       >  2:262125/1‑141 (MQ=255)                                        aTCTTACGGCAAACTTTATTTGATTTTATAGGCTTAATTTATTAAAATAACGTGTGAGCTAAAATAATTGTTTAAGCATTGTTACACTAAAAAATGCAAATAACAATTGAACTTAAAGATAAAGAGGTGACAAGAATGAGc                                                                                                      >  1:261519/1‑141 (MQ=255)                                               ggCAAACTTTATTTGATTTTATAGGCTTAATTTATTAAAATAACGTGTGAGCTAAAATAATTGTTTAAGCATTGTTACACTAAAAAATGCAAATAACAATTGAACTTAAAGATAAAGAGGTGACAAGAATGAGCAGTATga                                                                                               >  2:265788/1‑141 (MQ=255)                                               ggCAAACTTTATTTGATTTTATAGGCTTAATTTATTAAAATAACGTGTGAGCTAAAATAATTGTTTAAGCATTGTTACACTAAAAAATGCAAATAACAATTGAACTTAAAGATAAAGAGGTGACAAGAATGAGCAGTATga                                                                                               <  1:363853/141‑1 (MQ=255)                                                gCAAACTTTATTTGATTTTATAGGCTTAATTTATTAAAATAACGTGTGAGCTAAAATAATTGTTTAAGCATTGTTACACTAAAAAATGCAAATAACAATTGAACTTAAAGATAAAGAGGTGACAAGAATGAGCAGTATgag                                                                                              >  1:321044/1‑141 (MQ=255)                                                           ttGATTTTATATGCTTAATTTATTAAAATAACGTGTGAGCTAAAATAATTGTTTAAGCATTGTTACACTAAAAAATGCAAATAACAATTGAACTTAAAGATAAAGAGGTGACAAGAATGAGCAGTACGAGAGCAGAGCgtg                                                                                   <  2:408046/141‑1 (MQ=255)                                                                       gCTTAATTTATTAAAATAACGTGTGAGCTAAAATAATTGTTTAAGCATTGTTACACTAAAAAATGCAAATAACAATTGAACTTAAAGATAAAGAGGTGACAAGAATGAGCAGTATGAGAGCAGAGCGTGTTGGTGAACaaa                                                                       <  2:107481/141‑1 (MQ=255)                                                                             tttATTAAAATAACGTGTGAGCTAAAATAATTGTTTAAGCATTGTTACACTAAAAAATGCAAATAACAATTGAACTTAAAGATAAAGAGGTGACAAGAATGAGCAGTATGAGAGCAGAGCGTGTTGGTTAACAAATgaaga                                                                 <  2:141500/141‑1 (MQ=255)                                                                              ttattaAAATAACGTGTGAGCTAAAATAATTGTTTAAGCATTGTTACACTAAAAAATGCAAATAACAATTGAACTTAAAGATAAAGAGGTGACAAGAATGAGCAGTATGAGAGCAGAGCGTGTTGGTGAACAATTgaagaa                                                                >  2:395571/1‑141 (MQ=255)                                                                                    aaaTAACGTGTGAGCTAAAATAATTGTTTAAGCATTGTTACACTAAAAAATGCAAATAACAATTGAACTTAAAGATAAAGAGGTGACAAGAATGAGCAGTATGAGAGCAGAGCGTGTTGGTGAACAAATGAAGAAGGAAtt                                                          >  2:15860/1‑141 (MQ=255)                                                                                        aaCGTTTGAGCTAAAATAATTGTTTAAGCATTGTTACACTAAAAAATGCAAATAACAATTGAACTTAAAGATAAAGAGGTGACAAGAATGAGCAGTATGAGAGCAGAGCGTGTTGGTGAACAAATGAAGAAGGAATTAATg                                                      <  1:336432/141‑1 (MQ=255)                                                                                             gtgAGCTAAAATAATTGTTTAAGCATTGTTACACTAAAAAATGCAAATAACAATTGAACTTAAAGATAAAGAGGTGACAAGAATGAGCAGTATGAGAGCAGAGCGTGTTGGTGAACAAATGAAGAAGGAATTAATGGatat                                                 >  2:335209/1‑141 (MQ=255)                                                                                                 gCTAAAAGAATTGTTTAAGCATTGTTACACTAAAAAATGCAAATAACAATTGAACTTAAAGATAAAGAGGTGACAAGAATGAGCAGTATGAGAGCAGAGCGTGTTGGTTAACAAATGAAGAAGGAATTAATGGATatcatc                                             <  1:148295/141‑1 (MQ=255)                                                                                                  cTAAAATAATTGTTTAAGCATTGTTACACTAAAAAATGCAAATAACAATTGAACTTAAAGATAAAGAGGTGACAAGAATGAGCAGTATGAGAGCAGAGCGTGTTGGTGAACAAATGAAGAAGGAATTAATGGTTAtcatca                                            <  1:274626/141‑1 (MQ=255)                                                                                                        gatttGTTTAAGCATTGTTACACCGAAAAATGTAAATAACAATTGAACTGCAAGATAAAGAGGGGACAAGAATGTGCAGTATGAGAGCAGAGCGTGTTGGTGGACAAAGGAAGAAGGAGTTTATGGATATCATAAACAATa                                      <  2:97121/138‑1 (MQ=255)                                                                                                            tGTTTAAGCATTGTTACACTAAAAAATGCAAATAACAATTGAACTTAAAGATAAAGAGGTGACAAGAATGAGCAGTATGAGAGCAGAGCGTGTTGGTGAACAAATGAAGAAGGAATTAATGGATATCATCAACAATAAAGt                                  >  2:146158/1‑141 (MQ=255)                                                                                                              tttAAGCATTGTTACACTAAAAAATGCAAATAACAATTGAACTTAAAGATAAAGAGGTGACAAGAATGAGCAGTATGAGAGCAGAGCGTGTTGGTGAACAAATGAAGAAGGAATTAATGGATATCATCAACAATAAAGTCa                                >  1:43391/1‑141 (MQ=255)                                                                                                                       tGTTACACTAAAAAATGCAAATAACAATTGAACTTAAAGATAAAGAGGTGACAAGAATGAGCAGTATGAGAGCAGAGCGTGTTGGTGAACAAATGAAGAAGGAATTAATGGATATCATCAACAATAAAGTCAAAGATCCTc                       >  1:396558/1‑141 (MQ=255)                                                                                                                              cTAAAAAATGCAAATAACAATTGAACTTAAAGATAAAGAGGTGACAAGAATGAGCAGTATGAGAGCAGAGCGTGTTGGTGAACAAATGAAGAAGGAATTAATGGATATCATCAACAATAAAGTCAAAGATCCTCGAGTTgg                >  1:400101/1‑141 (MQ=255)                                                                                                                                            tAACAATTGAACTTAAAGATAAAGAGGTGACAAGAATGAGCAGTATGAGAGCAGAGCGTGTTGGTGAACAAATGAAGAAGGAATTAATGGATATCATCAACAATAAAGTCAAAGATCCTCGAGTTGGTTTTattacaatta  <  1:323063/141‑1 (MQ=255)                                                                                                                                            |                                                                                                                                             ATGTCGACTATTATTGGAAAATTTTCTGTTGAAATGCCTATCTTACGGCAAACTTTATTTGATTTTATAGGCTTAATTTATTAAAATAACGTGTGAGCTAAAATAATTGTTTAAGCATTGTTACACTAAAAAATGCAAATAACAATTGAACTTAAAGATAAAGAGGTGACAAGAATGAGCAGTATGAGAGCAGAGCGTGTTGGTGAACAAATGAAGAAGGAATTAATGGATATCATCAACAATAAAGTCAAAGATCCTCGAGTTGGTTTTATTACAATTA  >  CP000730/1292658‑1292937

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.