BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	52495 =	148 (0.860)	181 (1.060) +T	5/294	13.4	55.5%	intergenic (+105/‑568)	USA300HOU_0043/USA300HOU_0044	hypothetical membrane protein/possible transcriptional regulator
*	?	CP000730	= 52988	144 (0.840)	181 (1.060) +T	5/294	13.4	55.5%	intergenic (+598/‑75)	USA300HOU_0043/USA300HOU_0044	hypothetical membrane protein/possible transcriptional regulator
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 181 total aligned reads displayed.

TACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP000730/52641‑52495

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGCGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGCGATTTTCGCGCGATTACTACGATG  <  CP000730/52988‑52855

 ACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTAGGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTCCTACGATGATTTCAAACGATTCATCTGATCATTTCACGTGA                                                                                                                                      >  1:243112/1‑149

 ACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCCCTGATTATTTCACGTGA                                                                                                                                      >  1:532954/1‑149

  CGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTCCGATGTTTTCAAACGATTCCTCTGATTATTTCAGGTGAT                                                                                                                                     >  1:718094/1‑149

  CGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGTTTCCTTTGATTATTTCACGTGct                                                                                                                                     >  2:325197/1‑147

         TTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCG                                                                                                                              <  1:1228807/149‑1

         TTCAAACGATTCCGCTGATTATTTCACGAGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGCTTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCG                                                                                                                              <  1:379071/149‑1

          tcaagctgtttCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGAAGATGGCAAACGATTCCTCGGATTATTTCACGTGATTTTCGCGC                                                                                                                             <  1:1528740/138‑1

            AAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACAATGATTTCAAACTATTCCTCTCATTATTTTCCGTGATTTTCGCACGA                                                                                                                           >  2:563539/1‑149

             AACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGCTCCCTATCCTTATATCACGTGATTTTCAAGCGAT                                                                                                                          >  1:734056/1‑149

               ccATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTA                                                                                                                        <  2:712004/147‑1

                GATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCGAACGATTCTTCTGATTATTTCAAGTGATTTTCGCGCcgtttt                                                                                                                       >  2:1273238/1‑143

                 atccaTCTGATTATTTCCCGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACT                                                                                                                      <  2:438930/144‑1

                 ATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGTTTCCTCTGATTATTTCACTTGATTTTCGCGCGATTttt                                                                                                                      >  1:1370072/1‑146

                    CCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCACGATTACTACGATGATTTCAACCGATTCCTCTGATTATTGCAAGTGATTTTCGCGCGATTgttttt                                                                                                                   >  2:1105961/1‑143

                     CTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGA                                                                                                                  <  1:1611122/149‑1

                       CTGATTATTTCACGTGATTTTCGCGCAATATGGACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATt                                                                                                                >  1:1705590/1‑148

                        TGATTATTTCTCGTGATTTTCGCGCGATTACTACGATGAATTCAAACGATTCCTCTGATTATTTCACGCGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGA                                                                                                               <  2:253725/149‑1

                         GATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGAT                                                                                                              <  2:457495/149‑1

                         GATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGAT                                                                                                              <  1:917209/149‑1

                           ttctcccctgctATTTTCTCGCCATTACTACGATGATTTCAAACGATTCCTCTCATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTT                                                                                                            <  2:1364572/137‑1

                            TATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTCATTATTTCACGTGATTTTCACCCGATTTTTACTATGTTTTt                                                                                                           >  2:1065412/1‑148

                              TTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAA                                                                                                         <  1:1446055/149‑1

                               TTCACGTGATTTTTGCGGGATTACTACGATGATTTATAATTAGTCCTCTGATTATTTCACGTGATTTTCGCGCGCTTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTACGCGCGATTACTACGATGATTTCAAA                                                                                                        >  1:1264964/1‑149

                               TTCACGTGATTTTCGCGCGATTACTACGATGATATCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATGTCACGTGATTTTCGCGGGATTAGTACGATGAAATCAAA                                                                                                        >  2:1219605/1‑149

                                TCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAAC                                                                                                       >  1:669982/1‑149

                                TCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTAGCGCGATTTCTCCGATGTTTTCAAAC                                                                                                       >  1:166640/1‑149

                                TCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCACAACCAATGCCACGTGATTTTCGCGCGATTACTACAATGATTTCAAAC                                                                                                       >  1:742881/1‑149

                                 CACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCATCTGATTATTTCACGTGATTTTCGCACGATTTGTACGATtgtttaaagat                                                                                                      >  2:1174421/1‑138

                                    GTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTGCAAACGATTCCTCTGATTATTCCACGTGATTTTCGCGCGATTCCTACGATGATTTCAACCGATc                                                                                                   >  1:204324/1‑148

                                     TGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACTATTC                                                                                                  >  1:364440/1‑149

                                      ttTTTTCGCACTATTACCTCGATGATCTCAAACGCTCCCTCTTATTAGTTCACGTGATGTTCGCTCGATTACTACGATTATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCTCGCGATTACTACGATGATTTCAAACGATTCC                                                                                                 <  2:312147/147‑1

                                      GATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCC                                                                                                 <  1:201478/149‑1

                                       tTTTTCGCGAGATTATCACGATCATTTCAAACCGTCCCTCTGAGTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTTATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCT                                                                                                <  2:1395715/148‑1

                                        TTTTCGCTCGTTTAGTACGATGATTTCAAACGACTCCTCTGATTATTTCACTTGATTTTCGCGCGATTACTACGATGATTTCAAACGATCCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTC                                                                                               <  1:875322/149‑1

                                        TTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTC                                                                                               <  2:1433022/149‑1

                                        TTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTC                                                                                               <  1:368150/149‑1

                                        TTTTCGCCCTATTCCTCTGATTTTTTCTAACCATCCCTATGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGGTTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTC                                                                                               <  2:809165/149‑1

                                          TTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTG                                                                                             >  1:1212930/1‑149

                                           tgccgcatTTACTACCGTCATTTCAAACCATCCCCCTGATTATTTCACGTGATTTTCGCGCGGTTACTCCGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGA                                                                                            <  2:614653/141‑1

                                           TCGCTCGATTACTTCGATGTTTTCAAACGATTTCTCTGATTATTTCTCGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGA                                                                                            <  1:134074/149‑1

                                           TCGCGCGATTACTACGATTATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGA                                                                                            <  1:850132/149‑1

                                           TCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGA                                                                                            <  1:815703/149‑1

                                           TCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGAT                                                                                                                          <  1:1418964/119‑1

                                             GCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGTTTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTCAGATTATTTCAAACTATTCATCTGATT                                                                                          >  2:1365888/1‑149

                                             GCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGCTTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATT                                                                                          >  2:1512936/1‑149

                                              CGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCGCGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCATCTGATTATTTCACGTGATTTTCGCGGGATTACTCAGATGTTTGTAACCGCTTCCTCTGATTt                                                                                         >  1:1063590/1‑148

                                              CGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCAATTTCTACTATGATTTCAAACGATCACTCTGATTt                                                                                         >  2:1061048/1‑148

                                              CGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCACGATTACTACGATTATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGGTTACTTCGAGGTTTTCTAACGATTCactcgatta                                                                                         >  2:888338/1‑140

                                               GCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTATTACGTTGATTTAAAACGTTACCTCgcgttat                                                                                        >  2:75970/1‑142

                                                CGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTGGCGCGATTAGTACGATGATTTCAAACGATTCCTTTGATTATT                                                                                       >  1:1484071/1‑149

                                                CGATTACTACGATGATTTCAAACGATCCCTCTGATTATTTCACGTGACTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCCCGTGATTTTCGCGCGATTACTCCGATGATTTCAAACGCTCCCCCTGCTTATc                                                                                       >  1:1460944/1‑148

                                                    TACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCACGCGATTACTCCGATGCTTTCAAACGTTTCCTCTGATTACTTCAC                                                                                   >  2:1532206/1‑149

                                                    TACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGACTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTGCACGTGATTTTCGCTCAATTGTTCCGATTATTTCAAACTTTTCCTCTGATTATTTtat                                                                                   >  2:1132638/1‑146

                                                     tCTACGATGATTTCACACGCTTCCCCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACG                                                                                  <  2:1624346/148‑1

                                                      CTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTGTTGGGATGGTTTTGAGCGTTTGCTCGGATTATTTtcggg                                                                                 >  2:298729/1‑144

                                                       TACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTA                                                                                                                        <  1:1481612/109‑1

                                                        ACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGTTTCCTCTGATTATTTCAgccta                                                                               >  2:1307268/1‑144

                                                        ACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGCGA                                                                               >  1:978123/1‑149

                                                        ACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACT                                                                                                                      <  1:1020841/110‑1

                                                        ACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACT                                                                                                                      <  1:889881/110‑1

                                                        ACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGA                                                                                                                           >  2:1158777/1‑105

                                                          GATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTCCTATGCCTTCAAACGATTCCCCTGATTATTTCcccttatt                                                                             >  1:1581320/1‑141

                                                          GATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGAGATTACTACGAGGATTTAAAACGATTCATCTGATTATTTCACGCGATT                                                                             >  1:1399578/1‑149

                                                                 TCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGA                                                                                                                           <  1:1693558/96‑1

                                                                       GATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTC                                                                                                           >  2:520131/1‑106

                                                                       GATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTC                                                                                                           <  2:1575605/106‑1

                                                                       GATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTC                                                                                                           <  1:520131/106‑1

                                                                                   TATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGA                                                                                                               >  1:1143336/1‑90

                                                                                   TATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGA                                                                                                               <  1:454381/90‑1

                                                                                     TTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGAT                                                                                           <  2:1150608/108‑1

                                                                                     TTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGAT                                                                                           >  1:1150608/1‑108

                                                                                     TTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTC                                                                                               <  2:1014506/104‑1

                                                                                       TCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGA                                                                                                     >  1:845114/1‑96

                                                                                       TCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGA                                                                                                     <  2:845114/96‑1

                                                                                       TCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGA                                                                                                     <  2:1709420/96‑1

                                                                                        CACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCG                                                                                                                            <  1:420134/72‑1

                                                                                          CGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTT                                                                                                            <  1:1190689/86‑1

                                                                                            TGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTA                                                                                                                        >  2:1722908/1‑72

                                                                                            TGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTA                                                                                                                        >  2:819492/1‑72

                                                                                            TGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTA                                                                                                                        <  1:1722908/72‑1

                                                                                              tTTTTCGCGACATTACTACGATGCTCTCAAACGGTTCCTCTTATTATTTCACGTTATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGCGATTTTCGCGCGATTACTACGATGATTTCACACGATTCCT                                         <  2:448277/148‑1

                                                                                                     CGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCC                                                                                                 >  2:687643/1‑86

                                                                                                             CTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTAT                                                                                        <  2:460274/87‑1

                                                                                                              TACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGA                                                                                            <  2:1415091/82‑1

                                                                                                               ACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGA                                                                                            >  2:387121/1‑81

                                                                                                               ACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCT                                                                                              >  2:634784/1‑79

                                                                                                               ACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCT                                                                                              <  1:634784/79‑1

                                                                                                                 GATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATT                                                                                          >  2:1608584/1‑81

                                                                                                                 GATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCT                                                                                                <  2:1487642/75‑1

                                                                                                                 GATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGA                                                                                                                           >  1:1571945/1‑48

                                                                                                                     ATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGA                                                                                            <  2:553758/75‑1

                                                                                                                     ATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGA                                                                                            >  1:553758/1‑75

                                                                                                                          AAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGAT                                                                                                              >  1:618198/1‑52

                                                                                                                           AACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAACCGATTCCTC                                                                                               >  2:289562/1‑66

                                                                                                                           AACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTC                                                                                               <  1:289562/66‑1

                                                                                                                              GATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTC                                                                                                           >  2:13258/1‑51

                                                                                                                              GATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGACTTC                                                                                                           <  1:13258/51‑1

                                                                                                                                     CTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCC                                                                                                 <  2:1477055/54‑1

                                                                                                                                          TATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATT                                                                                          <  1:1620463/56‑1

                                                                                                                                          TATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCT                                                                                                <  2:36616/50‑1

TACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP000730/52641‑52495

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGCGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGCGATTTTCGCGCGATTACTACGATG  <  CP000730/52988‑52855

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 13 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.