BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	52495 =	148 (0.860)	181 (1.060) +T	5/294	13.4	55.5%	intergenic (+105/‑568)	USA300HOU_0043/USA300HOU_0044	hypothetical membrane protein/possible transcriptional regulator
*	?	CP000730	= 52988	144 (0.840)	181 (1.060) +T	5/294	13.4	55.5%	intergenic (+598/‑75)	USA300HOU_0043/USA300HOU_0044	hypothetical membrane protein/possible transcriptional regulator
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 153 total aligned reads displayed.

TATCGTTGTTTTTTAAAGCATTAGATGCCTTAAAGAAATAGTTTTTCACTGAAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGT  >  CP000730/52350‑52640

tATCGTTTTTTTTTAAAGCATTAGATGCCTTAAAGAAATAGTTTTTCACTGAAAATATTTATAGATATAATTAAACTTACTTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTg                                                                                                                                                <  2:1381354/149‑1 (MQ=255)

tATCGTTGTTTTTTAAAGCATTAGATGCCTTAAAGAAATAGTTTTTCACTGAAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCAAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTg                                                                                                                                                >  2:452044/1‑149 (MQ=255)

  tCGTTGTTTTTTAAAGCATTAGATGCCTTAAAGAAATAGTTTTTCACTGAAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGaa                                                                                                                                              >  2:1593110/1‑149 (MQ=255)

  tCGTTGTTTTTTAAAGCATTAGATGCCTTAAAGAAATAGTTTTTCACTGAAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGaa                                                                                                                                              <  2:439700/149‑1 (MQ=255)

  tCGTTGTTTTTTAAAGCATTAGATGCCTTAAAGAAATAGTTTTTCACTGAAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGaa                                                                                                                                              <  1:704920/149‑1 (MQ=255)

  tCGTTGTTTTTTAAAGCATTAGATGCCTTAAAGAAATAGTTTTTCACTGAAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGaa                                                                                                                                              <  2:1095805/149‑1 (MQ=255)

  tCGTTGTTTTTTAAAGCATTAGATGCCTTAAAGAAATAGTTTTTCACTGAAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGaa                                                                                                                                              <  1:1187496/149‑1 (MQ=255)

  tCGTTGTTTTTTAAAGCATTAGATGCCTTAAAGAAATAGTTTTTCACTGAAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGaa                                                                                                                                              >  2:532954/1‑149 (MQ=255)

      tgttTTTTAAAGCATTAGATGCCTTAAAGAAATAGTTTTTCACTGAAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAaataa                                                                                                                                          >  1:1061048/1‑149 (MQ=255)

       gttTTTTAAAGCATTAGATGCCTTAAAGAAATAGTTTTTCACTGAAAGGCTTTATAGGTATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTCCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAaataat                                                                                                                                         <  2:475347/149‑1 (MQ=255)

            ttAAAGCATTAGATGCATTAAAGAAATAGTTTTTCAATGAAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCagag                                                                                                                                    <  1:1550215/149‑1 (MQ=255)

             tAAAGCATTAGATGCCTTAAAGAAATAGTTTTTCACTGAAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAgg                                                                                                                                   >  1:711768/1‑149 (MQ=255)

                 gCATTAGATGCCTTAAAGAAATAGTTTTTCACTGAAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAAtg                                                                                                                               >  2:1705590/1‑148 (MQ=255)

                       gATGCCTTAAAGAAATAGTTTTTCACTGAAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGa                                                                                                                         >  2:1675733/1‑149 (MQ=255)

                        aTGCCTTAAAGAAATAGTTTTTCACTGAAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGaa                                                                                                                        <  1:1142344/149‑1 (MQ=255)

                         tGCCTTAAAGAAATAGTTTTTCACTGAAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGaaa                                                                                                                       >  1:1717924/1‑149 (MQ=255)

                                aaGAAATAGTTTTTCACTGAAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGTAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATAATCgt                                                                                                                >  2:1399578/1‑149 (MQ=255)

                                aaGAAATAGTTTTTCACTGAAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCgt                                                                                                                <  1:1452729/149‑1 (MQ=255)

                                aaGAAATAGTTTTTCACTGAAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCgt                                                                                                                <  1:643208/149‑1 (MQ=255)

                                aaGAAATAGTTTTTCACTGAAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTCGAAATCATCgt                                                                                                                <  1:1237436/149‑1 (MQ=255)

                                 agcaaTAGTTTTTCACTGAAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAAGGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATACGAGGAATCGTTTGAAATCATCgta                                                                                                               >  2:718775/4‑149 (MQ=255)

                                 aGAAATAGTTTTTCACTGAAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATGCCTAGCGTGTTTTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCgta                                                                                                               >  1:325197/1‑149 (MQ=38)

                                 aGAAATAGTTTTTCACTGAAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCgta                                                                                                               >  2:623434/1‑149 (MQ=255)

                                 aGAAATAGTTTTTCACTGAAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCgta                                                                                                               >  1:470960/1‑149 (MQ=255)

                                  gAAATAGTTTTTCACTGAAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAAGGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCgtag                                                                                                              >  1:477699/1‑149 (MQ=255)

                                        gttgttCACTGAAAATATTGATAGATATAATTAAAATTAATTAAAATTAAGCCAGGATAACGGAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAAGCGCGTGAAATAATCAGAGGAATCGTGTGAAATCATCGTAGTAATcg                                                                                                        <  2:43279/149‑1 (MQ=38)

                                          ttttCACTGAAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATAGTTCTGAAATACGAAAAATGTTGTGCAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTCATcgcc                                                                                                      >  1:1236749/1‑148 (MQ=255)

                                                cTGAAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGaaaa                                                                                                >  1:640390/1‑149 (MQ=255)

                                                cTGAAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGaaaa                                                                                                >  1:681823/1‑149 (MQ=255)

                                                cTGAAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGaaaa                                                                                                >  1:164067/1‑149 (MQ=255)

                                                  gAAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATc                                                                                              <  1:1106205/149‑1 (MQ=255)

                                                     aaTATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCGTAATCGTTCTCAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGAGCGAAAATCACg                                                                                           <  1:1173860/149‑1 (MQ=255)

                                                        attgataggtcaaattaaaattaaTTAATATTAAGTCAGGATGATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAAGCGCGTGAAAGAATCAGAGGAATCGTTTGAAATCATCGTAGTAGTCGCGCGAAAATCACGTGa                                                                                        <  2:336823/137‑1 (MQ=25)

                                                        atTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGa                                                                                        >  2:1027030/1‑149 (MQ=255)

                                                         tttATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGaa                                                                                       <  2:1600455/149‑1 (MQ=255)

                                                                  ataATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCaga                                                                              >  1:202490/1‑149 (MQ=255)

                                                                       taaaattaaTTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAAt                                                                         >  1:379418/1‑149 (MQ=255)

                                                                       taaaattaaTTAAGATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAAt                                                                         <  2:575658/149‑1 (MQ=255)

                                                                        aaaattaaTTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATc                                                                        >  1:816537/1‑149 (MQ=255)

                                                                           attaattaATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGtt                                                                     <  1:1576911/149‑1 (MQ=255)

                                                                              aattaatAATAAACAAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAACCAGAGGAATCGTTTGAAATCATCGTAGTAATCGACGGAAAACCACGTGAAATAATCAGAGGAATCGTTTGa                                                                  <  2:717048/149‑1 (MQ=21)

                                                                                 taatATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAat                                                               <  1:1380547/149‑1 (MQ=255)

                                                                                    aatTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAatcat                                                            <  1:537177/148‑1 (MQ=255)

                                                                                     atTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAACCTCACGTGAAATAATCCGAGGAACCGTTTGAAatcagc                                                           >  1:1446672/1‑147 (MQ=255)

                                                                                     atTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGCAATCGTTTGAAatcatc                                                           <  1:1261799/149‑1 (MQ=255)

                                                                                      ttAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCg                                                          >  2:993096/1‑149 (MQ=255)

                                                                                      ttAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCG‑AAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCgt                                                         <  1:1178527/149‑1 (MQ=255)

                                                                                       tAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCgt                                                         <  1:1568618/149‑1 (MQ=255)

                                                                                       tAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCgt                                                         >  1:1396811/1‑149 (MQ=255)

                                                                                        aaGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATGATAAGAGGAATCGTTTGAAATCATGgta                                                        >  2:836078/1‑149 (MQ=255)

                                                                                        aaGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCgta                                                        <  1:1147565/149‑1 (MQ=255)

                                                                                        aaGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCgta                                                        <  2:554940/149‑1 (MQ=255)

                                                                                        aaGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCgta                                                        <  1:1297004/149‑1 (MQ=255)

                                                                                         aGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCgtag                                                       >  1:75970/1‑149 (MQ=255)

                                                                                         aGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCgtag                                                       >  1:298729/1‑149 (MQ=255)

                                                                                         aGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCgtag                                                       >  1:151309/1‑149 (MQ=255)

                                                                                          gCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCgtagt                                                      >  1:577695/1‑149 (MQ=255)

                                                                                          gCCAGGATAATGTAGTCTTAATCGTTCTGAAATAAGAGAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCgtagt                                                      >  1:1702795/1‑149 (MQ=255)

                                                                                             aGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAAt                                                   <  1:1027030/149‑1 (MQ=255)

                                                                                               gATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGACATAATCAGAGGGAGCGGTTGAAATCCTAGTAGTAATACCGCAAAAAGGACCTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATcg                                                 >  2:1212930/1‑149 (MQ=21)

                                                                                                 tAATGTAGTCTTAATCGTTCTGAAATAAGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATcgcg                                               <  1:549024/149‑1 (MQ=255)

                                                                                                    agtagtaATAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAACCAGAGGAATAGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGa                                            <  2:1093876/148‑1 (MQ=255)

                                                                                                      tAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCATAGTACTCGCGCGaaa                                          >  1:1365888/1‑149 (MQ=255)

                                                                                                         tCTTAATCGTTCTGAAATACGAAAAATGTTGTGGACATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAGTCACGTGAAATACTCAAAGGAATCGTTTGAAATCAGAGAGGTAGTCGCTCGAAAAta                                       >  2:90660/1‑148 (MQ=18)

                                                                                                          cTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGACATCAGCGTAGTAATCGCGCGAAAATCa                                      >  1:293660/1‑149 (MQ=255)

                                                                                                          cTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATcc                                      >  1:1174421/1‑148 (MQ=255)

                                                                                                          cTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCa                                      <  1:1634855/149‑1 (MQ=255)

                                                                                                           ttAATCGTTCTGAAATACGAAAAATGTTGGGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCAc                                     <  1:452287/149‑1 (MQ=255)

                                                                                                           ttAAACGTTCAGAAATACGAAAAATGTTGTGTAAATCGCGTGAAATAATCAAATGAATCGTGTTAAATCATCGTAATAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTCCTCGCGCGAAAATCAc                                     <  2:733427/149‑1 (MQ=17)

                                                                                                            tAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACg                                    <  1:1587973/149‑1 (MQ=255)

                                                                                                            tAATCGTTAAGAAATACGAAAAATGGTGTGAAAATCGCGTGAAATAATCAGAGCAATCGTTTTAAAACATCGGAGAAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACg                                    <  2:769903/149‑1 (MQ=14)

                                                                                                            aaattgtttagAAATACTAAAAATTTTTTTGAAGTCACGTGAAATAATCAGAGCCATCGCTTGAAATCATCGTAATAATCGTGCGAAAATCACGTGAAATAATCATAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACg                                    <  2:1527259/139‑1 (MQ=11)

                                                                                                              aTCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTg                                  >  1:134195/1‑149 (MQ=255)

                                                                                                              aTCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGCAGCAGTCGCGCGAACACCACGTg                                  >  1:130317/1‑149 (MQ=17)

                                                                                                              aTCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCACCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTg                                  >  1:576644/1‑149 (MQ=255)

                                                                                                              aTCGTTCTGAAATACGAAAAATGTAGTGGGAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATAACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTg                                  >  1:888338/1‑149 (MQ=255)

                                                                                                               tCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGa                                 >  2:610625/1‑149 (MQ=255)

                                                                                                                ttttCTGAAATACTAAAAATTTTGTAGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGTGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGaa                                <  2:507779/147‑1 (MQ=255)

                                                                                                                cGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGaa                                >  2:862891/1‑149 (MQ=255)

                                                                                                                cGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGaa                                <  1:936562/149‑1 (MQ=255)

                                                                                                                    cTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAaataa                            <  1:993096/149‑1 (MQ=255)

                                                                                                                      gAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATc                          >  1:1273238/1‑149 (MQ=255)

                                                                                                                       aaaTACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCa                         >  1:416579/1‑149 (MQ=255)

                                                                                                                       aaaTACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCa                         >  1:1105961/1‑149 (MQ=255)

                                                                                                                         aTACTAAAGAGGTTGTGGAAAGCGCGTGGAATAATCAGAGGAGTCGTTTGAAATCAGCGGAGGAAGCGCGCGAAAATCACGTGAAATAGTCTGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCaga                       <  1:1616665/149‑1 (MQ=14)

                                                                                                                           cggagtaatcgtgtgTAAATCGCGTGAAATAATCAGAGGAATCGTGTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAgg                     <  2:130832/138‑1 (MQ=11)

                                                                                                                            cGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGa                    >  2:234109/1‑149 (MQ=255)

                                                                                                                             gAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGaa                   >  2:669982/1‑149 (MQ=255)

                                                                                                                              aaaaaTGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAAt                  >  2:175497/1‑149 (MQ=255)

                                                                                                                                  aTGTTGTGGAAATCGCGTGAGATAATCAGAGGAATCGTGTGCAATCATCGGAGTAATCGCGTGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGtt              <  2:1684565/149‑1 (MQ=14)

                                                                                                                                  aTGTTGTAGAAATCGCGTGAAATAATCAGAGGAATAGTGTGAAATAATCGGAATAATGTTGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGtt              <  2:1519748/149‑1 (MQ=11)

                                                                                                                                   tgttgtGGAAATCGCGTAAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAAGCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGttt             <  1:1310309/149‑1 (MQ=255)

                                                                                                                                    gttgttGAAATCGCGTAAAATAATCAAAGGAAACGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTg            <  1:899947/149‑1 (MQ=255)

                                                                                                                                     ttgtGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGGGCGAAATTCACGGGAAATAGTCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGATTGa           >  1:404873/1‑149 (MQ=11)

                                                                                                                                     ttgtGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGACTGGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATAATAAGGGAAATCGTTTGa           >  1:820570/1‑149 (MQ=11)

                                                                                                                                     ttgtGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGa           >  1:321062/1‑149 (MQ=38)

                                                                                                                                         ggAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAACATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAGTCAGGGGAATCGTTGGaaagg       >  2:1264964/1‑147 (MQ=255)

                                                                                                                                           aaaTCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAatcat     <  2:459652/149‑1 (MQ=32)

                                                                                                                                              tCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCgt  <  1:610625/149‑1 (MQ=32)

                                                                                                                                              tCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCgt  <  1:978123/149‑1 (MQ=32)

TATCGTTGTTTTTTAAAGCATTAGATGCCTTAAAGAAATAGTTTTTCACTGAAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGT  >  CP000730/52350‑52640

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 13 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.