BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	52495 =	158 (1.250)	186 (1.480) +T	5/294	6.5	57.5%	intergenic (+105/‑568)	USA300HOU_0043/USA300HOU_0044	hypothetical membrane protein/possible transcriptional regulator
*	?	CP000730	= 52988	119 (0.940)	186 (1.480) +T	5/294	6.5	57.5%	intergenic (+598/‑75)	USA300HOU_0043/USA300HOU_0044	hypothetical membrane protein/possible transcriptional regulator
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 186 total aligned reads displayed.

ACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP000730/52640‑52495

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GATTTTCGCGCGATTACTACGATGATTTCAAACGAT‑TCCTCTGATTATTTCACGCGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGCGATTTTCGCGCGATTACTACGATGATT  <  CP000730/52988‑52852

ACGATGATTTCAGACGATTCCTCTGATTATTTCACGTGATGTTCGCGCAATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGc                                                                                                                                          >  1:960462/1‑148

ACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGA                                                                                                                                          >  1:964451/1‑149

   ATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTT                                                                                                                                       >  1:875611/1‑149

   ATGATTTCAAACGATTCCTCGGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGGGATTTTCGCGCGATTATTTCGATGTTTGTAAACGTATCCTCTGATTATTTAACGTGcatt                                                                                                                                       >  2:1206094/1‑145

    TGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTT                                                                                                                                      >  1:1067268/1‑149

    TGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACAACGATGATTTCAAACGCTTCCTCTGATTATTTCACGTGATTTTCGCGGGATTGCTACGACGATTTCAAACGATTCATCTGTTTATTTCACGTGAATTT                                                                                                                                      >  2:395138/1‑149

      ATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCACGCGATTATTCGTATGTTTTCAAACGATTCCTTTCATTATTTCGCGTGATTTTCa                                                                                                                                    >  2:434284/1‑148

        TTCAAACGATTCCTCTGATTATTTCACTTGCTTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCG                                                                                                                                  <  2:49200/149‑1

         tcaatactTTCCTCTTATTATTTCTCGTGATTTTCGCGCGATTACTCCGATTATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGC                                                                                                                                 <  1:697877/141‑1

          CAAACGATTCCTCTGATTATTTCACGTTATTTTCGCGCGATTACTCCGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCG                                                                                                                                <  2:68032/149‑1

           AAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGA                                                                                                                               >  1:496569/1‑149

           AAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGA                                                                                                                               >  1:496463/1‑149

           AAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGA                                                                                                                               >  1:1087405/1‑149

           AAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCACCATAGTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGA                                                                                                                               >  1:1319598/1‑149

             ACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTCTTTCACTTGATTTTCGCGCGATT                                                                                                                             >  1:2112/1‑149

                ATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCACACGATTCCCCTAATTATTTCACCTGATTTTCACGCGATTtca                                                                                                                          >  2:1346611/1‑146

                 gcccttgtacTATTTCGCGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTA                                                                                                                         <  2:316330/139‑1

                 TTCCTCTGATTATTTCCCGTGATTTTCGCGCGAGTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTA                                                                                                                         <  1:17589/149‑1

                    cgcttcttcTTTCCCGTGCTTTTCGCGCTATTACTACNATGATCTCAAACCATTCCCCTTATTATTTCCCGCGATTTTCGCGCGATTACTACGATGATTGCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGA                                                                                                                      <  2:882672/140‑1

                      CTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCATCTGATTATTTCACGTGATTTTCGCGCGATTAATACGATG                                                                                                                    >  1:425106/1‑149

                           TATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTC                                                                                                               <  2:1310926/149‑1

                            tTTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCA                                                                                                              <  1:343520/148‑1

                              TTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTCCACGTGATTTTCACGCAATTCCTACAATGACTTTAAA                                                                                                            >  1:628789/1‑149

                                  CGTGATTTTCGCGTGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGAT                                                                                                        >  1:1013485/1‑149

                                  CGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCG                                                                                                                                  <  1:15881/123‑1

                                  CGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCACGATTACTACGATTTTTTCACACGATTCCTCTGATTATTTTACGTGATTTTCACGCGATTTTTACTATGTTTTTAAACGtt                                                                                                        >  2:494380/1‑147

                                    TGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACTATGATTTCAAACGATTCCGCTGGTTATTTCACGTGATTTTCGCGCGATTACTACGATGCTTTCAAggtattc                                                                                                      >  2:151098/1‑142

                                      tttgTCGCCCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGAT‑TCCT                                                                                                   <  2:692633/145‑1

                                      ATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACT                                                                                                                          <  1:839182/127‑1

                                      ATTTTCGCGCGATTACTACGATGATTTCAAACGATATTGCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGAT‑TCCT                                                                                                   >  1:320957/1‑149

                                      ATTTTCGCACGATTACGACGATTATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGAT‑TCCT                                                                                                   <  2:619348/149‑1

                                       TTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCCATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCAGCATTTCTCCGATTATTTCAAACatttactt                                                                                                   >  2:1136209/1‑141

                                        TTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGAT‑TCCTCT                                                                                                 <  1:919018/149‑1

                                         TTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGAT‑TCCTCTG                                                                                                >  1:780433/1‑149

                                           CGCGCGCTTCCTTCGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTCCTACGATGATTTCAAACGATGCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGAT‑TCCTCTGAT                                                                                              <  1:516201/149‑1

                                           CGCGCGATTACTACGATGATTTCAAACGACTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGAT‑TCCTCTGAT                                                                                              <  1:506665/149‑1

                                           CGCGCGACTACTACGATTATTTCAAACCACTCCTCTTATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGAT‑TCCTCTGAT                                                                                              <  2:787732/149‑1

                                             CGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTTCTATTATGCTTTCAACCGTT‑ACGTCTGATTA                                                                                            >  1:564232/1‑149

                                             CGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGAT‑TCCTCTGATTA                                                                                            >  1:370307/1‑149

                                             CGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGAGATTACTAGGATTATTTAAAAGTAT‑TCCTttagttt                                                                                            >  1:80643/1‑142

                                               CGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACT                                                                                                                          <  1:486729/118‑1

                                               CGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTAAGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCCAGCCATTTCTACGATGATTT‑AAACAATATTCTCTGATTATT                                                                                          >  2:238917/1‑149

                                               CGATTACTACGATGATTTCAAACGATTCCTCCGCTGAGGGCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGAT‑TCCTCTGATTATT                                                                                          >  1:321949/1‑149

                                                 ATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGAT‑TCCTCTGATTATTTC                                                                                        <  2:1218470/149‑1

                                                 ATTACTACGATGAATTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGAT                                                                                                                              <  2:919688/112‑1

                                                   TACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAACAGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGAT‑TCCTCTGATTATTTCAC                                                                                      >  1:130439/1‑149

                                                   TACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGTGATTACTACGATGATTTCAAACGAT‑TCCTTGGATTATTTCAC                                                                                      >  1:1037701/1‑149

                                                      TACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTCCGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTGCGGGCGATTACTACGATGATTTCTAACAAT‑TCCTCTcttggttttagtct                                                                                   >  1:1182743/1‑135

                                                      TACGATGATTTCAAACGATTCCGCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGAT‑TCCTCTGATTATTTCACGCG                                                                                   >  1:743119/1‑149

                                                         GATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAA                                                                                                            >  2:168058/1‑122

                                                         GATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATG                                                                                                                    >  2:762884/1‑114

                                                         GATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATG                                                                                                                    <  1:297940/114‑1

                                                         GATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCACGCAATTACTACGATGTTTTCAAACGTT‑TCCTCTGATTATTTttcccaatt                                                                                >  2:1112515/1‑140

                                                         GATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTCCGCGCGATTACTACGATGATTTCAAACGAT‑TCCTCTGATTATTTCACGCGATT                                                                                >  1:67547/1‑149

                                                          ATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGAT‑TCCTCTGATTATTTCACGCGATTT                                                                               >  1:1287197/1‑149

                                                          ATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGAT                                                                                                                  <  1:80147/115‑1

                                                          ATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGAT                                                                                                                  <  2:1077376/115‑1

                                                          ATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACT                                                                                                                          >  1:102130/1‑107

                                                          ATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACT                                                                                                                          <  2:102130/107‑1

                                                          ATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCACGCGATTATTACGATGATTTCAAAAGTT‑TCCTCTGATTATTTCACcttattt                                                                               >  2:750971/1‑142

                                                           TGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCG                                                                                                                                <  1:5838/100‑1

                                                           TGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCG                                                                                                                                >  1:848023/1‑100

                                                           TGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCG                                                                                                                                <  2:848023/100‑1

                                                           TGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTAATACGATGATTTCAAACTATTCCTCTGATTATTTCACGTGATTTTCGCGCG                                                                                                                                >  2:5838/1‑100

                                                            GATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTA                                                                                                                            >  2:131309/1‑103

                                                             ATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCTCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCAATTTTTCCGATGTTTTCAAACGTT‑TCCTTTGATTATTTttcttttttttcc                                                                            >  2:616115/1‑136

                                                                 CAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGAT‑TCCT                                                                                                   <  1:618204/122‑1

                                                                   AACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGC                                                                                                                                 <  2:518085/91‑1

                                                                    ACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGC                                                                                                                                 <  2:1038946/90‑1

                                                                      GATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGAAGATTTCAAACGAT‑TCGTCTGATTATTTCACGCGATTTTCGCGCatttcg                                                                   >  2:499292/1‑143

                                                                      GATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCACGATTACTCCGATGATTTCAAACGTT‑TCCTCTGATAATTTCACGGGATTTCCGCTCGATTtc                                                                   >  2:324751/1‑147

                                                                            TCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTT                                                                                                                                       <  2:320272/76‑1

                                                                               GATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGAT                                                                                                                     >  1:53981/1‑91

                                                                                 TTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATT                                                                                                                             <  1:301362/81‑1

                                                                                    TTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGAT                                                                                                                  <  2:546908/89‑1

                                                                                    TTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGAT                                                                                                                  <  2:378791/89‑1

                                                                                       CACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCG                                                                                                                                    <  1:154794/68‑1

                                                                                       CACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCG                                                                                                                                    >  2:11347/1‑68

                                                                                       CACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCG                                                                                                                                    <  1:11347/68‑1

                                                                                        ACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGAT‑TCCTCTGATTAT                                                                                           <  1:923987/107‑1

                                                                                        ACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCA                                                                                                              <  2:276334/89‑1

                                                                                        ACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCA                                                                                                              >  1:276334/1‑89

                                                                                            gacTTTCGCGCTCTTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGAT‑TCCTCTGATTATTTCACGCGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCC                                             <  2:1160560/146‑1

                                                                                                     GCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCA                                                                                                              >  1:1100603/1‑76

                                                                                                     GCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCA                                                                                                              <  2:1100603/76‑1

                                                                                                     GCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCA                                                                                                              <  1:444083/76‑1

                                                                                                      CGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCG                                                                                                                                >  1:225544/1‑57

                                                                                                      CGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCG                                                                                                                                <  2:225544/57‑1

                                                                                                        ATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGAT‑TCCTCTGATTGTTTCACGCGATTTTCACGAGATTATTAGGATTTTTGCCAACGTTTCCTtcgatcctttc                                 >  2:134560/1‑138

                                                                                                        ATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGAT                                                                                                                              <  1:265837/57‑1

                                                                                                               CGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGAT‑TCCTCTGATTATTTCACGCGATTTTCGCGCGATTATTCCGATGTTTTCAGCAGATTCCGCTGAgagttatctgggaa                          >  2:1061889/1‑135

                                                                                                                GATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAA                                                                                                            <  1:932011/67‑1

                                                                                                                GATGATTTCAAAAGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAA                                                                                                            >  2:932011/1‑67

                                                                                                                  TGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGAT‑TCCTC                                                                                                  >  2:913659/1‑74

                                                                                                                      TTCAAACGATTCCTCTGATTATTTCACGTGATTTTC                                                                                                                                     <  1:244526/36‑1

                                                                                                                         AAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGAT‑TCCTCT                                                                                                 <  2:586344/68‑1

                                                                                                                          AACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGAT‑TCCTCTGATTATTTCACGCGATTT                                                                               >  2:713530/1‑85

                                                                                                                                    CTGATTATTTCACGTGATTTTCGCGCGATTACTACGAT                                                                                                                     <  1:99989/38‑1

                                                                                                                                         TATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGAT‑TCCTCTGATTATTTCAC                                                                                      >  2:203091/1‑63

                                                                                                                                              CACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGAT‑TCCTCT                                                                                                 <  1:615101/47‑1

ACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGTGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP000730/52640‑52495

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GATTTTCGCGCGATTACTACGATGATTTCAAACGAT‑TCCTCTGATTATTTCACGCGATTTTCGCGCGATTACTACGATGATTTCAAACGATTCCTCTGATTATTTCACGCGATTTTCGCGCGATTACTACGATGATT  <  CP000730/52988‑52852

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 13 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.