| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP000730 | 52495 = | 158 (1.250) | 186 (1.480) +T |
5/294 | 6.5 | 57.5% | intergenic (+105/‑568) | USA300HOU_0043/USA300HOU_0044 | hypothetical membrane protein/possible transcriptional regulator |
| ? | CP000730 | = 52988 | 119 (0.940) | intergenic (+598/‑75) | USA300HOU_0043/USA300HOU_0044 | hypothetical membrane protein/possible transcriptional regulator | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
Only 100 of 169 total aligned reads displayed.
TGTATCGTTGTTTTTTAAAGCATTAGATGCCTTAAAGAAATAGTTTTTCACTG‑AAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTA > CP000730/52348‑52641 | tGTATCGTTGTTTTTTAAAGCATTAGATGCCTTAAAGAACTAGTTTTTCGCTG‑AAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATcgcg > 2:1080091/1‑149 (MQ=255)tGTATCGTTGTTTTTTAAAGCATTAGATGCCTTAAAGAAATAGTTTTTTTTTT‑TTTTTTTTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGATATcgcg > 2:489404/1‑149 (MQ=255) gTATCGTTGTTTTTTAAAGCATTAGATGCCTTAAAGAAATAGTTTTTCACTG‑AAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTACTCGTGCTGAAATACGAAAAATGTTGTGGAAATCGCGt < 2:952756/149‑1 (MQ=255) cGTTTTTTTTTAAAGCATTAGATGCCTTAAAGAAATAGTTTTTCACTG‑AAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGaaa < 2:696053/149‑1 (MQ=255) tgttTTTTAAAGCATTAGATGCCTTAAAGAAATAGTTTTTCACTG‑AAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAaataa < 2:306189/149‑1 (MQ=255) ttttttAAAGCATTAGATGCCTTAAAGAAATAGTTTTTCACTG‑AAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATc > 1:1058763/1‑149 (MQ=255) ttttttAAAGCATTAGATGCCTTAAAGAAATAGTTTTTCACTG‑AAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCACGTGAAATAATc > 2:628789/1‑149 (MQ=255) tttttAAAGCATTAGATGCCATAAAGAAATAGTTTTTCACTG‑AAAATACTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCa < 1:408940/149‑1 (MQ=255) tttttAAAGCAGTAGCGGCCTTAAAGAAATAGTTTTTCACTG‑AAAATATTTATAGATATAATTAAAATCAATTAATATTAAGCCAGGATAATGTAGTCTTAATGGTTCTGAAATACGAAAAAGGTTTGGAAAATCACTTGAAATAGTCa > 2:491299/1‑149 (MQ=255) ttttAAAGCATTAGATGCCTTAAAGAAATAGTTTTTCACTG‑AAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCag < 1:463220/149‑1 (MQ=255) tAAAGCATTAGATGCCTTAAAGAAATAGTTTTTCACTG‑AAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAgg > 2:227009/1‑149 (MQ=255) tAAAGCATTAGATGCCTTAAAGAAATAGTTTTTCACTG‑AAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAgg > 2:321949/1‑149 (MQ=255) gCATTAGATGCCTTAAAGAAATAGTTTTTCACTG‑AAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATc > 2:370307/1‑149 (MQ=255) cATTAGATGCCTTAAAGAAATAGTTTTTCACTG‑AAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCg > 1:1346629/1‑149 (MQ=255) cATTAGATGCCTTAAAGAAATAGTTTTTCACTG‑AAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCg > 2:155493/1‑149 (MQ=255) aTTAGATGCCTTAAAGAAATAGTTTTTCACTG‑AAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGt < 1:20190/149‑1 (MQ=255) aGATGCCTTAAAGAAATAGTTTTTCACTG‑AAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTg > 2:505352/1‑149 (MQ=255) gattacTTAAAGTAATAGTTTTTTATTG‑AAAATATTTATAGATTTAATTAAAATTAATCAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAAGTCGAAAATTGTTGGGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGa < 2:885673/144‑1 (MQ=255) aTGCCTTAAAGAAATAGTTTTTCACTG‑AAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGaa > 1:735502/1‑149 (MQ=255) aTGCCTTAAAGAAATAGTTTTTCACTG‑AAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGaa > 1:63622/1‑149 (MQ=255) cccTTAAAGAAATAG‑TGTTCACAGTAAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAACGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAat < 1:1009564/148‑1 (MQ=39) ccTTAAAGAAATAGTTTTTCACTG‑AAAATATTTATAGATATAATTCAAATTAATTAATATTAAGCCAGTATAAGGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAAGCAAAGGCATCGTTTGAAatc > 1:255441/1‑149 (MQ=255) ccTTAAAGAAATAGTTTTTCACTG‑AAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAatc > 2:277060/1‑149 (MQ=255) ccTTAAAGAAATAGTTTTTCACTG‑AAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAatc > 2:1161067/1‑149 (MQ=255) ttAAAAAAATAGTTTTTCACTG‑AAAATATTCATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAatcat < 1:938624/149‑1 (MQ=255) tAAAGAAATAGTTTTTCACTG‑AAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAatcatc < 2:36635/149‑1 (MQ=255) tAAAGAAATAGTTTTTCAATG‑AAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGGAATCGCGTGAAATAATCAGAGGAATCGTTTGAAatcatc < 1:851210/149‑1 (MQ=255) aaaGAAATAGTTTTTCACTG‑AAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCg > 2:381365/1‑149 (MQ=255) aaGAAATAGTTTTTCACTG‑AAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATGATGTAGTCTTAATCGTTCTGAAATCCGATATTGGCGATTGAAATCGCGTGAACTAAGCCGAGGAGTCGTTTGAActcatcat > 1:373148/1‑147 (MQ=255) aaGAAATAGTTTTTCACTG‑AAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATACTGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCCAAGGAATCGTTTGaaacaatcat > 2:4508/1‑142 (MQ=255) aaGAAATAGTTTTTCACTG‑AAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATGgt > 2:780433/1‑149 (MQ=255) aaGAAATAGTTTTTCACTG‑AAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCgt > 1:238537/1‑149 (MQ=255) aGAAATAGTTTTTCACTG‑AAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCgta > 2:1287197/1‑149 (MQ=255) gAAATAGTTTTTCACTG‑AAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCgtag < 1:245903/149‑1 (MQ=255) gAAATAGTTTTTCACTG‑AAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCgtag < 1:1050603/149‑1 (MQ=255) aGTTTTTCACTG‑AAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGGAGTAATc > 2:1067268/1‑149 (MQ=255) gTTTTTCACTG‑AAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATcg > 1:750971/1‑149 (MQ=255) ttttCACTG‑AAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATcgcg < 1:1280761/149‑1 (MQ=255) ttttCACTG‑AAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATcgcg < 2:1188158/149‑1 (MQ=255) aaaTATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCGTCGTAGTAATCGCGCGAAAATCAc < 1:798201/149‑1 (MQ=255) aaaTATTTATAGAGATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCAc < 1:1193435/149‑1 (MQ=255) tatTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTg > 1:494583/1‑149 (MQ=255) ccatgttcctatctttaaaatttaGTAAAATTCAGGCAATATAATGGAGTGTTTCGTTTTATGAAATACGAATAATGTTGCGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGa < 2:1269305/135‑1 (MQ=9) tttATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGaa < 1:1008113/149‑1 (MQ=255) tataATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCag < 1:1156229/149‑1 (MQ=255) taaaattaaTTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGGATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGGAATAATCAGAGGAAt > 1:1531/1‑149 (MQ=255) taaaattaaTTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGGAt > 1:1157/1‑149 (MQ=255) aaaattaaTTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAAAAATCGGAgggagc > 1:1269305/1‑145 (MQ=255) aaattaaTTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCg > 1:1346611/1‑149 (MQ=255) aaattaaTTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCg > 1:174703/1‑149 (MQ=255) aaattaaTTAATATTAAGCCAGGATAACGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTCTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGCAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCg > 1:873185/1‑149 (MQ=255) atatTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGCAGAATTCGTATTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAatca > 1:1319607/1‑149 (MQ=25) atatTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAatca > 1:1319576/1‑149 (MQ=255) ttAAGCCAGGATAATGTTCTCTTAATCGTTCTGAAATACGCAACAAGGAGGTGCAATCCCAAGTTGTAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAatcatag > 1:983588/1‑147 (MQ=14) ttAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCg > 1:1297038/1‑149 (MQ=255) tAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGACATAATCAGAGGAATCGTTTGACATCATCgt > 1:314281/1‑149 (MQ=255) tAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCgt < 1:1109445/149‑1 (MQ=255) tAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTCGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCgt < 1:807937/149‑1 (MQ=255) aGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAACTGTTGTGGAACTAGAGTGACCTACTAAGCGGAATAGTATGAAATCGACATAGAAACCGCGCGAAAATCAGGTTAAATAATCAGAGGAATCGTTTAAAACCAtagtag > 2:1327269/1‑149 (MQ=16) aGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCATTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAAGCAGAGGCATAGTTTCAAAACAACgtaa > 2:298145/1‑148 (MQ=21) gCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCgtagt > 1:709255/1‑149 (MQ=255) ccAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGGTTGAAATCACCgcagta > 1:1211960/1‑149 (MQ=255) aGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAGTAGTCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAAt > 1:1712/1‑149 (MQ=255) gATAATGTAGGCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTAAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATcg < 2:1173063/149‑1 (MQ=255) gTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAAt > 2:743119/1‑149 (MQ=255) tCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAAta > 2:96922/1‑148 (MQ=255) tCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATc > 1:134560/1‑149 (MQ=255) tCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATc > 1:394948/1‑149 (MQ=255) cTTAATCGTTCTGAAATACGAAAAATGTTGTAGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTACTCGCGCGAAAATCa < 2:844280/149‑1 (MQ=255) cTTAATCGTTCTGAAATACGAAAAATGGTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATcgcgcgccgaccg < 2:496945/149‑8 (MQ=255) ttAATCTTATTGAAATACGTAAAATGTTGTGGTAATCGCGCGAAATAATCAGGGGAGTCGTTTGAAGTCATCGTAGTAATCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCAc < 2:1230523/149‑1 (MQ=14) ttAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATcgc > 1:445728/1‑147 (MQ=255) ttAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCAc > 1:645747/1‑149 (MQ=255) tAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACg > 2:67547/1‑149 (MQ=255) aTCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTg > 2:964451/1‑149 (MQ=255) tgTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGACTCGTTTGAAATCATCGTAGTAAGCGCCCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGaa < 2:1105899/148‑1 (MQ=255) cGTTCTGATATACGCAAAATGTTGTCGAAAACGCGTAAAATAATCAGAGGATTCGTTTAAAATGATCGTAGTAATCCCGTGAAAATCGCGTGAACTAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGaa < 2:572581/149‑1 (MQ=14) ttttagAAATACGAAAAATGTTGTGGAATTAACGTGAAATAATGAGGGGAAAAGTTTGAAAACATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGaaa < 2:766640/144‑1 (MQ=14) tGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAactaat > 1:923395/1‑149 (MQ=255) gAAATACGTAAAATTTTGTGAAAATAACGTGAAATAATCAGAGGAATAGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATc < 2:192825/149‑1 (MQ=11) gAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATc < 1:489404/149‑1 (MQ=255) gAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATc < 1:1080091/149‑1 (MQ=255) gAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATAAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGGAATAATCAGAGGAATCGTTTGAAATCATCGTAGGTATCGCGCGAAAATCACGTGAAATAATc < 1:871561/149‑1 (MQ=255) aaTACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCag > 1:1135774/1‑149 (MQ=255) agccGAAAAATGTTGTGGAAAACGCGTAAAATAATCAGAGGACTTCTCTAACCACCTCGGAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCaga < 1:39051/146‑1 (MQ=14) agaagAAAAATCTTGTAGAAATCGCGTGAAATAATCAGAGTAATCGTTTTAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCaga < 1:277060/145‑1 (MQ=11) aTACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGCAATAGTTTGAAAAAATCGTAGTAAGCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCaga < 1:52935/149‑1 (MQ=14) aTACGAAAAATGGTGTGGAAATCGCGGGAAAGAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCaga < 1:362467/149‑1 (MQ=255) aaaaaTGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAAt > 1:1016539/1‑149 (MQ=255) aaaaaTGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAAt > 1:324751/1‑149 (MQ=255) aaaaaTGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAAt > 1:499292/1‑149 (MQ=255) gaaatcgagccgAAATCCCCTGAAATAATCCGAGGAAACGGTTGAAATAATCCTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATc < 2:275925/138‑1 (MQ=1) ttgtGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGa < 1:1092776/149‑1 (MQ=37) ttgtGAAAATAGCGAGAAATAATCAGAGGAATCGTTTTAAATCATCGTAAAAATCGCGCGAAAATCACGTGAAATAATCAGAGTAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGa < 2:508669/149‑1 (MQ=11) tgtgGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGaa > 2:1013485/1‑149 (MQ=37) tgGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAat > 1:395138/1‑149 (MQ=35) gAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAatca < 1:21695/149‑1 (MQ=32) aaaTCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGtt > 1:713530/1‑85 (MQ=35) aaaTCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGtt > 1:604364/1‑85 (MQ=35) aaaTCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAatcat < 1:96922/149‑1 (MQ=32) | TGTATCGTTGTTTTTTAAAGCATTAGATGCCTTAAAGAAATAGTTTTTCACTG‑AAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTA > CP000730/52348‑52641 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |