| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP000730 | 932460 = | 36 (0.950) | 3 (0.090) | 3/246 | 5.2 | 8.5% | intergenic (+6/+257) | dltD/nifU | D‑alanine transfer protein DltD/possible NifU family protein |
| ? | CP000730 | 932506 = | 32 (0.920) | intergenic (+52/+211) | dltD/nifU | D‑alanine transfer protein DltD/possible NifU family protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CTGATGGGAAAGTTATTTTATACTATTTATCTGATTAATTATTTTATTATTGCCACATATCCAAGCACATATTACTATTCTATTCTATGAAATTTAAAATATAAAAATAGCACATACGCTCAATCAAAATCGTTGAGTTATGTGCTATTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP000730/932609‑932460‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tatgtgctatttTTATATTTTAAATTTCATAGAATAGAATAGTAATATGTGCTTGGATATGTGGCAATAATAAAATAATTAATCAGATAAATAGTATAAAATAACTTTCCCATCAGTCCAATTTGACAGCGAAAAAAGACAGGTA > CP000730/932506‑932638 CTGATGGGAAAGTTATTTTATACTATTTATCTGATTAATTATTTTATTATTGCCACATATCCAAGCACATATTACTATTCTATTCTATGAAATTTAAAATATAAAAATAGCACATACGCTCAATCAAAATCGTTGAGTTAT < 1:295563/141‑1 TAAAATATAAAAATAGCACATACGCTCAATCAAAATCGTTGAGTTATGTGCTATTTTTATATTTTAAATTTCATAGAATAGAATAGTAATATGTGCTTGGATATGTGGCAAT < 1:77271/112‑1 TAAAATATAAAAATAGCACATACGCTCAATCAAAATCGTTGAGTTATGTGCTATTTTTATATTTTAAATTTCATAGAATAGAATAGTAATATGTGCTTGGATATGTGGCAAT > 2:77271/1‑112 AAAATATAAAAATAGCACATACGCTCAATCAAAATCGTTGAGTTATGTGCTATTTTTATATTTTAAATTTCATAGAATAGAATAGTAATATGTGCTTGGATATGTGGCAATAATAAAATAATTAATCAGATAAATAGTATA > 2:263296/1‑141 TGCTATTTTTATATTTTAAATTTCATAGAATAGAATAGTAATATGTGCCTGGATATGTGGCAATAATAAAATAATTAATCAGATAAATAGTATAAAATAACTTTCCCATCAGTCCAATTTGACAGAGAAAAAAGACAGGTA > 2:99198/1‑141 CTGATGGGAAAGTTATTTTATACTATTTATCTGATTAATTATTTTATTATTGCCACATATCCAAGCACATATTACTATTCTATTCTATGAAATTTAAAATATAAAAATAGCACATACGCTCAATCAAAATCGTTGAGTTATGTGCTATTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP000730/932609‑932460‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tatgtgctatttTTATATTTTAAATTTCATAGAATAGAATAGTAATATGTGCTTGGATATGTGGCAATAATAAAATAATTAATCAGATAAATAGTATAAAATAACTTTCCCATCAGTCCAATTTGACAGCGAAAAAAGACAGGTA > CP000730/932506‑932638 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |